BLASTX nr result
ID: Rauwolfia21_contig00042210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00042210
(364 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera] 87 3e-15
gb|EMJ05203.1| hypothetical protein PRUPE_ppa025711mg, partial [... 86 7e-15
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 80 3e-13
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [... 79 8e-13
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas... 78 1e-12
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 77 2e-12
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 77 2e-12
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 77 2e-12
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291... 77 2e-12
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 76 4e-12
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 76 4e-12
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 76 4e-12
ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein A... 75 7e-12
ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein A... 75 7e-12
gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [... 75 7e-12
gb|EMJ13814.1| hypothetical protein PRUPE_ppa017091mg, partial [... 75 7e-12
ref|XP_004301407.1| PREDICTED: putative ribonuclease H protein A... 75 9e-12
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 75 1e-11
gb|EMJ08028.1| hypothetical protein PRUPE_ppa026328mg, partial [... 74 3e-11
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 73 4e-11
>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
Length = 517
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/111 (38%), Positives = 65/111 (58%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
+LIK VGQA+ Y M TFLLP+++ E+L + M F+ G K R + SW+ LC+ K
Sbjct: 192 ILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKSDGGRRINWLSWDKLCLRKE 251
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKM 336
GLGF+ +D N A++ K W + TK + +L+K +Y R FL ++
Sbjct: 252 EGGLGFRNLRDFNLAMLGKQGWNLITKPDSLIARLLKARYYCSRDFLSARL 302
>gb|EMJ05203.1| hypothetical protein PRUPE_ppa025711mg, partial [Prunus persica]
Length = 534
Score = 85.5 bits (210), Expect = 7e-15
Identities = 46/120 (38%), Positives = 66/120 (55%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VLIKSV QA+ YPM FL P + +++D + F+ G+ + + W+ SW++L M K
Sbjct: 82 VLIKSVAQAVPSYPMSVFLFPNSFCQEIDSILANFWWGQSQQSNKIHWI-SWKNLGMPKN 140
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
G+GF+ KD N AL+ K W++ + FW QL+K KY FL K SW W
Sbjct: 141 EGGMGFRNLKDFNVALLAKQGWRMVMEPQAFWAQLLKSKYFPNGDFLRAGKGAK-SSWAW 199
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/111 (36%), Positives = 66/111 (59%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VLIK+V QA+ Y MQ F++P +I + +++ R FF G+KE + R W+ +WE L + K
Sbjct: 800 VLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKEEERRVAWV-AWEKLFLPKK 858
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKM 336
GLG + N AL+ K +W++ TK + ++IK KY FL+ ++
Sbjct: 859 EGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARV 909
>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/104 (36%), Positives = 61/104 (58%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VLIK++ A+ +PMQ F + ++++ M F+ GK S T+ W +SW +LC+ K+
Sbjct: 372 VLIKAIATAIPTFPMQCFKFTKGLCDEINSEMAKFWWGKPNSDTKIHW-KSWSALCLPKS 430
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGR 315
GLGF+ N AL+ K +W++ + N +W +LIK L GR
Sbjct: 431 DGGLGFRDLNTFNLALLGKQAWRLIHEPNSYWAKLIKASLLEGR 474
>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 573
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPL-WMRSWESLCMSK 180
VLIKSV QA+ Y M FL+P ++ E+L+R M F+ G K++ R + WMR W+ L + K
Sbjct: 322 VLIKSVAQAIPSYCMGAFLIPASLCEELERMMNSFYWGSKKNGRRGINWMR-WDFLTLHK 380
Query: 181 AARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLD 327
+ GLGF+ + N +++ K W++ + + + +++K KY R FLD
Sbjct: 381 SLGGLGFRNLEAFNLSMLGKQGWKLLSDSSSLFTRILKAKYFPRRDFLD 429
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/120 (33%), Positives = 65/120 (54%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
+LIK+V QA+ Y M F LP+ + E + + + F+ GKK + W + WE LC +K
Sbjct: 202 ILIKAVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWGKKREKRSIHWSK-WERLCQAKK 260
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLGF+ N+AL+ K SW++ +++K KY R F++ + + S+IW
Sbjct: 261 RGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQ-IGSNPSYIW 319
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/120 (33%), Positives = 65/120 (54%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
+LIK+V QA+ Y M F LP+ + E + + + F+ GKK + W + WE LC +K
Sbjct: 405 ILIKAVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWGKKREKRSIHWSK-WERLCQAKK 463
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLGF+ N+AL+ K SW++ +++K KY R F++ + + S+IW
Sbjct: 464 RGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQ-IGSNPSYIW 522
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 77.0 bits (188), Expect = 2e-12
Identities = 40/120 (33%), Positives = 65/120 (54%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
+LIK+V QA+ Y M F LP+ + E + + + F+ GKK + W + WE LC +K
Sbjct: 202 ILIKAVAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWGKKREKRSIHWSK-WERLCQAKK 260
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLGF+ N+AL+ K SW++ +++K KY R F++ + + S+IW
Sbjct: 261 RGGLGFRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQ-IGSNPSYIW 319
>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
subsp. vesca]
Length = 948
Score = 77.0 bits (188), Expect = 2e-12
Identities = 42/119 (35%), Positives = 63/119 (52%)
Frame = +1
Query: 7 LIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKAA 186
LIKSV + +PM FLLP + Q++ + F+ GK ES + W+ WESL +KA
Sbjct: 445 LIKSVAMVIPSFPMSCFLLPKYLGNQINSAISNFWWGKSESINKIHWI-CWESLGRAKAV 503
Query: 187 RGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLGFK N AL+ K W++ ++ N W ++K +Y F++ + SW W
Sbjct: 504 GGLGFKDLHHFNLALLAKQCWRILSQPNSMWAMVLKARYFPNTGFMEAGKGHR-PSWSW 561
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/120 (30%), Positives = 68/120 (56%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VL+++ + Y MQ LPV+ ++D+ R F G ++ TR L +W +C +
Sbjct: 1327 VLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGH-DTNTRKLHSVNWAEICKPRN 1385
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLG + ++D N A +TK++WQ+++ +K WV++++ KY++ FL ++ SW W
Sbjct: 1386 EGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSN-CSWGW 1444
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/120 (30%), Positives = 68/120 (56%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VL+++ + Y MQ LPV+ ++D+ R F G ++ TR L +W +C +
Sbjct: 795 VLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGH-DTNTRKLHSVNWAEICKPRN 853
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLG + ++D N A +TK++WQ+++ +K WV++++ KY++ FL ++ SW W
Sbjct: 854 EGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSN-CSWGW 912
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/120 (30%), Positives = 68/120 (56%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VL+++ + Y MQ LPV+ ++D+ R F G ++ TR L +W +C +
Sbjct: 795 VLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGH-DTNTRKLHSVNWAEICKPRN 853
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLG + ++D N A +TK++WQ+++ +K WV++++ KY++ FL ++ SW W
Sbjct: 854 EGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSN-CSWGW 912
>ref|XP_006478212.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 387
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/120 (32%), Positives = 64/120 (53%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VLIK+V QA+ + M F +P + + + R + F+ G E++ W R WE LC +K
Sbjct: 136 VLIKAVAQAVPAFAMSVFKIPQGLCDDIQRAVARFWWGSSETRRSIHWAR-WEKLCSAKT 194
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLGF+ N+ALI K W+V + +++K KY + F++ K+ S++W
Sbjct: 195 RGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILKAKYFKHTDFMEAKLGSN-PSFVW 253
>ref|XP_006478211.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 478
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/120 (32%), Positives = 64/120 (53%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VLIK+V QA+ + M F +P + + + R + F+ G E++ W R WE LC +K
Sbjct: 227 VLIKAVAQAVPAFAMSVFKIPQGLCDDIQRAVARFWWGSSETRRSIHWAR-WEKLCSAKT 285
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLGF+ N+ALI K W+V + +++K KY + F++ K+ S++W
Sbjct: 286 RGGLGFREFSSFNQALIAKQGWRVLHNLDSLMAKILKAKYFKHTDFMEAKLGSN-PSFVW 344
>gb|EMJ20801.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 75.5 bits (184), Expect = 7e-12
Identities = 41/120 (34%), Positives = 61/120 (50%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VLIKSV A+ YPM FLL I ++ + F+ G +Q + W SW+ LC KA
Sbjct: 350 VLIKSVAAAIPAYPMSCFLLLATICNSINADLARFWWGHDGNQGKIHW-HSWKKLCRPKA 408
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
G+GF+ + N +L+ K W++ W +++K +Y FLD K + SW W
Sbjct: 409 EGGMGFRDLQAFNWSLLAKQCWRILRNPTTLWARILKARYFPECSFLDAKKGGR-ASWAW 467
>gb|EMJ13814.1| hypothetical protein PRUPE_ppa017091mg, partial [Prunus persica]
Length = 921
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/120 (35%), Positives = 64/120 (53%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VLIK V QA+ YPM FL P +++ + F+ G+K+ + + W+R W L + K
Sbjct: 640 VLIKVVAQAVPNYPMGVFLFPKMFCTKMESEIANFWWGQKQEERKIHWVR-WTELGLPKH 698
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
G+GF D N AL+ K W++ T+ N W +LIK +Y F++ + GSW W
Sbjct: 699 EGGMGFCDFHDFNLALLAKQCWRLLTELNSVWARLIKARYFPECNFMEATKGSR-GSWAW 757
>ref|XP_004301407.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 612
Score = 75.1 bits (183), Expect = 9e-12
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Frame = +1
Query: 4 VLIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKA 183
VLIKS+ A+ YPM F P + +++D F+ G+K+ + + W +SWE L + K+
Sbjct: 11 VLIKSMALAIPTYPMHCFKFPATMCKEIDAASAKFWWGQKKEKRKIYW-KSWEFLGLPKS 69
Query: 184 ARGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK--*GSW 357
GLGF++ + N AL+ K W+++T+ N W ++IK Y +DI K SW
Sbjct: 70 EGGLGFRKLAEFNIALLAKQVWRLHTEPNTLWAKMIKGIYYP---HMDILQAGKGYRASW 126
Query: 358 IW 363
W
Sbjct: 127 AW 128
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/99 (42%), Positives = 60/99 (60%)
Frame = +1
Query: 7 LIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKAA 186
L +SV QA+ Y MQT LP +I +LD+ R F + + R + + SW ++C K A
Sbjct: 222 LTQSVLQAVPIYAMQTTNLPGSIKTKLDQICRRFLWSGND-ELRKMSLVSWHNICQPKMA 280
Query: 187 RGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKY 303
GLGFKR MNEAL+ K++W + T+ NK VQ++ KY
Sbjct: 281 GGLGFKRLDIMNEALLLKVAWHLITEPNKLCVQVLSTKY 319
>gb|EMJ08028.1| hypothetical protein PRUPE_ppa026328mg, partial [Prunus persica]
Length = 712
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/119 (31%), Positives = 63/119 (52%)
Frame = +1
Query: 7 LIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKAA 186
++K+V +A+ Y M F P ++ + ++ M F+ +S T W +SW+ LC SK
Sbjct: 441 ILKAVAKAIPTYSMMCFRFPTSLCKDINSDMAKFWWHNTQSNTGIHW-KSWKHLCQSKQQ 499
Query: 187 RGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLRGRWFLDIKMVDK*GSWIW 363
GLGF+ ++N AL+ K SWQ+ N +WV+++K+++ V SW W
Sbjct: 500 GGLGFRDLAELNLALLGKQSWQILNNPNAYWVRVLKVRFFPSVEDFWQAKVGHRASWAW 558
>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 719
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/101 (32%), Positives = 61/101 (60%)
Frame = +1
Query: 7 LIKSVGQALACYPMQTFLLPVNIYEQLDRHMR*FF*GKKESQTRPLWMRSWESLCMSKAA 186
L++SV ++ Y MQT LP+++ E +D+ F G ++ + + + +WES+C K
Sbjct: 343 LVQSVTASIPIYAMQTAKLPLSLCESIDKANINFLWGDS-NEKKKIHLVNWESVCKPKHR 401
Query: 187 RGLGFKRSKDMNEALITKLSWQVYTKQNKFWVQLIKLKYLR 309
GLG K++ DMN+A++ K SW+++ + W + + KYL+
Sbjct: 402 GGLGLKKTADMNQAMLAKASWRIFQNDHGLWADIYRKKYLQ 442