BLASTX nr result

ID: Rauwolfia21_contig00042175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00042175
         (263 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004292183.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    66   6e-09
ref|XP_002307626.1| F-box family protein [Populus trichocarpa] g...    65   9e-09
ref|XP_002300803.1| F-box family protein [Populus trichocarpa] g...    64   2e-08
ref|XP_004247336.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    63   4e-08
ref|XP_002520982.1| F-box/leucine rich repeat protein, putative ...    61   1e-07
ref|XP_006349746.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    61   2e-07
gb|EPS68979.1| hypothetical protein M569_05789, partial [Genlise...    59   7e-07
gb|EOX94576.1| F-box/LRR-repeat protein 17 [Theobroma cacao]           57   2e-06
gb|EXB26571.1| F-box/LRR-repeat protein 17 [Morus notabilis]           57   3e-06

>ref|XP_004292183.1| PREDICTED: F-box/LRR-repeat protein 17-like [Fragaria vesca subsp.
           vesca]
          Length = 598

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 42/91 (46%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
 Frame = +3

Query: 15  PLLLPPP--RQTGSNLRRALSFDDIEL-----SDLPD-DXXXXXXXXXXXPNLCGSGKLP 170
           P LLPPP  RQ  SNLRRALSFDD+E      SD PD D               G G LP
Sbjct: 74  PALLPPPPPRQPYSNLRRALSFDDVESSGYGDSDAPDPDPDLDEIEDTEMDWDMGWGGLP 133

Query: 171 LTCLWEIXXXXXXXXXXXXXXVCRGWRETAK 263
           ++CLWEI              VCRGWRET +
Sbjct: 134 MSCLWEILRRLPPPGLLSAAMVCRGWRETTR 164


>ref|XP_002307626.1| F-box family protein [Populus trichocarpa]
           gi|222857075|gb|EEE94622.1| F-box family protein
           [Populus trichocarpa]
          Length = 588

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 35/79 (44%), Positives = 42/79 (53%)
 Frame = +3

Query: 27  PPPRQTGSNLRRALSFDDIELSDLPDDXXXXXXXXXXXPNLCGSGKLPLTCLWEIXXXXX 206
           PP RQ  SNLRRALSFDD +L     D            +  GSGKLP++C+WEI     
Sbjct: 81  PPSRQQHSNLRRALSFDDTDLRCESSDIEIDESELDLFDS--GSGKLPVSCMWEILRRLP 138

Query: 207 XXXXXXXXXVCRGWRETAK 263
                    VC+GWRETA+
Sbjct: 139 PEGLLAAARVCKGWRETAR 157


>ref|XP_002300803.1| F-box family protein [Populus trichocarpa]
           gi|222842529|gb|EEE80076.1| F-box family protein
           [Populus trichocarpa]
          Length = 588

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/80 (45%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +3

Query: 27  PPPRQTGSNLRRALSFDDIELS-DLPDDXXXXXXXXXXXPNLCGSGKLPLTCLWEIXXXX 203
           PPPRQ  SNLRRALSFDD +L  D P+                G GKLP++C+WEI    
Sbjct: 81  PPPRQQYSNLRRALSFDDSDLRCDSPEVEIDESEMDLFGS---GCGKLPVSCMWEILRRL 137

Query: 204 XXXXXXXXXXVCRGWRETAK 263
                     VC+GWRETA+
Sbjct: 138 PPAGLLAAGSVCKGWRETAR 157


>ref|XP_004247336.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum lycopersicum]
          Length = 592

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
 Frame = +3

Query: 24  LPPPRQTGSNLRRALSFDDIELSD----LPDDXXXXXXXXXXXPNLCGSGKLPLTCLWEI 191
           LPPPRQ    LRRALSFDDI ++D      D+            +L GSGKLP  CLWE+
Sbjct: 78  LPPPRQPVVQLRRALSFDDIGVTDESPGSDDEGEGEFLDFESELDLGGSGKLPANCLWEV 137

Query: 192 XXXXXXXXXXXXXXVCRGWRETAK 263
                         VC+GWR+ ++
Sbjct: 138 LKRLPPSSLLSSAKVCKGWRDVSR 161


>ref|XP_002520982.1| F-box/leucine rich repeat protein, putative [Ricinus communis]
           gi|223539819|gb|EEF41399.1| F-box/leucine rich repeat
           protein, putative [Ricinus communis]
          Length = 586

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   AVNRPLLLPPPRQTGSNLRRALSFDDIELS-DLPDDXXXXXXXXXXXPNLCGSGKLPLTC 179
           + +RPL  P PRQ  S+LRRALSFDDI++  D P+                GSG+LP +C
Sbjct: 76  STSRPL--PLPRQQYSHLRRALSFDDIDIRCDSPEPEMDESELDLFGS---GSGRLPASC 130

Query: 180 LWEIXXXXXXXXXXXXXXVCRGWRETAK 263
           +WE+              VC+GWR+TA+
Sbjct: 131 MWEVLRRLPPAGLLAAARVCKGWRDTAR 158


>ref|XP_006349746.1| PREDICTED: F-box/LRR-repeat protein 17-like [Solanum tuberosum]
          Length = 595

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
 Frame = +3

Query: 24  LPPPRQTGSNLRRALSFDDIELSD----LPDDXXXXXXXXXXXPN---LCGSGKLPLTCL 182
           LPPPRQ    LRRALSFDDI ++D      DD            +   L GSGKLP  CL
Sbjct: 78  LPPPRQAVPQLRRALSFDDIGVTDESPGSDDDEGVDEGEFLDFESELDLGGSGKLPANCL 137

Query: 183 WEIXXXXXXXXXXXXXXVCRGWRETAK 263
           WE+              VC+GWR+ ++
Sbjct: 138 WEVFKRLPPSSLLSSAKVCKGWRDVSR 164


>gb|EPS68979.1| hypothetical protein M569_05789, partial [Genlisea aurea]
          Length = 566

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/87 (39%), Positives = 44/87 (50%)
 Frame = +3

Query: 3   AVNRPLLLPPPRQTGSNLRRALSFDDIELSDLPDDXXXXXXXXXXXPNLCGSGKLPLTCL 182
           +V RP+  PP R      RRALSFDD+  ++  ++            +L  SGKLP+ CL
Sbjct: 80  SVVRPM--PPAR------RRALSFDDVSAAESVEEFETEGFDLDDGSDLERSGKLPMNCL 131

Query: 183 WEIXXXXXXXXXXXXXXVCRGWRETAK 263
           WE+              VCRGWRETAK
Sbjct: 132 WEVFKRLPPTALSSAAAVCRGWRETAK 158


>gb|EOX94576.1| F-box/LRR-repeat protein 17 [Theobroma cacao]
          Length = 602

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/84 (40%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
 Frame = +3

Query: 30  PPRQTGSNLRRALSFDDIELS------DLPDDXXXXXXXXXXXPNLCGSGKLPLTCLWEI 191
           PPRQ  S+LRRALSFDDI++       DL               N   SG LP  CLWE+
Sbjct: 87  PPRQPYSHLRRALSFDDIDIRCDSPELDLDGYDSPFLGTDLDPDNEIVSGGLPAGCLWEV 146

Query: 192 XXXXXXXXXXXXXXVCRGWRETAK 263
                         VC+GWRET K
Sbjct: 147 LRRLPPAGLMAAARVCKGWRETTK 170


>gb|EXB26571.1| F-box/LRR-repeat protein 17 [Morus notabilis]
          Length = 604

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
 Frame = +3

Query: 27  PPPRQTGSNLRRALSFDDI-----------ELSDLPDDXXXXXXXXXXXPNLCGSGKLPL 173
           PPPRQ  S+LRRALSFDD+           E+ D  D            P    SG LP 
Sbjct: 90  PPPRQPYSHLRRALSFDDVDNVGGFDVPEEEVEDEEDGFGATMEEMESDPV---SGGLPA 146

Query: 174 TCLWEIXXXXXXXXXXXXXXVCRGWRETAK 263
           +C+WE+              VC+GWRETA+
Sbjct: 147 SCVWEVLRRLPPSGLLSAAKVCKGWRETAR 176