BLASTX nr result
ID: Rauwolfia21_contig00042098
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00042098 (307 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I sub... 74 3e-11 ref|XP_003634465.1| PREDICTED: uncharacterized protein LOC100853... 61 1e-07 emb|CBI19898.3| unnamed protein product [Vitis vinifera] 61 1e-07 gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma c... 58 1e-06 >ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Solanum lycopersicum] gi|565396690|ref|XP_006363942.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform X1 [Solanum tuberosum] gi|565396692|ref|XP_006363943.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform X2 [Solanum tuberosum] Length = 121 Score = 73.6 bits (179), Expect = 3e-11 Identities = 31/37 (83%), Positives = 33/37 (89%) Frame = +1 Query: 190 MAYYRQRDFMFCELCGTMLIFKLPKYARCPLCKFKRR 300 MAY RQRDFMFCE+CGTML F PKYARCPLCKFK+R Sbjct: 1 MAYCRQRDFMFCEMCGTMLAFDSPKYARCPLCKFKKR 37 >ref|XP_003634465.1| PREDICTED: uncharacterized protein LOC100853901 [Vitis vinifera] Length = 104 Score = 61.2 bits (147), Expect = 1e-07 Identities = 26/37 (70%), Positives = 28/37 (75%) Frame = +1 Query: 190 MAYYRQRDFMFCELCGTMLIFKLPKYARCPLCKFKRR 300 MAY RQRDFMFC LCGTML KYA CPLCK +R+ Sbjct: 1 MAYSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRK 37 >emb|CBI19898.3| unnamed protein product [Vitis vinifera] Length = 126 Score = 61.2 bits (147), Expect = 1e-07 Identities = 26/37 (70%), Positives = 28/37 (75%) Frame = +1 Query: 190 MAYYRQRDFMFCELCGTMLIFKLPKYARCPLCKFKRR 300 MAY RQRDFMFC LCGTML KYA CPLCK +R+ Sbjct: 1 MAYSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRK 37 >gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma cacao] Length = 119 Score = 57.8 bits (138), Expect = 1e-06 Identities = 24/35 (68%), Positives = 26/35 (74%) Frame = +1 Query: 190 MAYYRQRDFMFCELCGTMLIFKLPKYARCPLCKFK 294 MAY + RDFMFC CG+ML PKYA CPLCKFK Sbjct: 1 MAYSQARDFMFCSFCGSMLSLVSPKYAECPLCKFK 35