BLASTX nr result
ID: Rauwolfia21_contig00041925
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00041925
(264 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 86 5e-15
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 84 2e-14
ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670... 84 2e-14
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 81 1e-13
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 76 4e-12
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 72 8e-11
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 70 4e-10
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 69 7e-10
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 68 1e-09
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 67 2e-09
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 66 4e-09
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 65 9e-09
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 65 1e-08
ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A... 64 2e-08
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 64 3e-08
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 63 5e-08
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 61 1e-07
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 61 1e-07
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A... 61 2e-07
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 60 2e-07
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = -2
Query: 260 IFPTPATILHRINSQAIRFLWNS----KQSP-IGWNKVTLPK*ESGLGIRDLSKWNLALM 96
IFP P ++L RIN+ FLW+ K P + W V PK E GLG+ +L WNLAL+
Sbjct: 184 IFPLPQSVLDRINASCCNFLWSKADIGKNKPLVAWPVVCSPKQEGGLGLFNLKDWNLALL 243
Query: 95 EKALLNIHSKKDSLWVKWVHHNYFSQQSVW 6
L + H KKDSL V+WVHH YF + W
Sbjct: 244 SHILWDFHCKKDSLRVRWVHHYYFRRSDEW 273
>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 239
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = -2
Query: 260 IFPTPATILHRINSQAIRFLWNS-----KQSPIGWNKVTLPK*ESGLGIRDLSKWNLALM 96
IFP ++L RIN+ FLW +S I W+ V PK E GLG+ +L WNL L+
Sbjct: 151 IFPLSQSVLDRINASCCNFLWGKADIGKNKSLIAWSVVCSPKKEGGLGLFNLKDWNLTLL 210
Query: 95 EKALLNIHSKKDSLWVKWVHHNYFSQQSV 9
+ L + H KKD LWV+WVHH YF V
Sbjct: 211 SRILWDFHCKKDFLWVRWVHHYYFRASDV 239
>ref|XP_006579213.1| PREDICTED: uncharacterized protein LOC102670237 [Glycine max]
Length = 383
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Frame = -2
Query: 263 AIFPTPATILHRINSQAIRFLWNS----KQSP-IGWNKVTLPK*ESGLGIRDLSKWNLAL 99
+IFP P ++L I + FLW K P + W++V PK E GLG+ +L WN+AL
Sbjct: 138 SIFPLPQSVLDTIIATCRNFLWGKADGGKIKPLVAWSEVCTPKKEGGLGLFNLKDWNIAL 197
Query: 98 MEKALLNIHSKKDSLWVKWVHHNYFSQQSVWE 3
+ L ++HSKKDSLWV+ VHH YF +VW+
Sbjct: 198 LSCILWDLHSKKDSLWVRLVHHYYFKGGNVWD 229
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Frame = -2
Query: 260 IFPTPATILHRINSQAIRFLWNS-----KQSPIGWNKVTLPK*ESGLGIRDLSKWNLALM 96
IFP P ++L RIN+ FLW K+ + W+ V PK E GLG+ +L WNLAL+
Sbjct: 151 IFPLPQSVLDRINASCRNFLWGKADIGKKKPLVAWSVVCSPKREGGLGLFNLKDWNLALL 210
Query: 95 EKALLNIHSKKDSLWVKWVHHNYFSQQSVW 6
L + H KKDSL WVHH YF + VW
Sbjct: 211 SCILWDFHCKKDSL---WVHHYYFRRSDVW 237
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Frame = -2
Query: 254 PTPATILHRINSQAIRFLWN-----SKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALMEK 90
P P ++ RIN+ FLW S++SPI W KV PK GL I +L+ WN + K
Sbjct: 643 PLPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILK 702
Query: 89 ALLNIHSKKDSLWVKWVHHNYFSQQSVW 6
L N+ +K D+LW+KW+H Y QS+W
Sbjct: 703 LLWNVCNKSDNLWIKWLHTYYIRGQSIW 730
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Frame = -2
Query: 254 PTPATILHRINSQAIRFLWN-----SKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALMEK 90
P P +++ +I+S F+W+ +++SPI WN V PK + GL I +L WN +
Sbjct: 643 PIPMSVIKKIDSMCRSFVWSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLN 702
Query: 89 ALLNIHSKKDSLWVKWVHHNYFSQQSV 9
L N+ K D+LWVKW+H +Y SV
Sbjct: 703 CLWNLCKKVDNLWVKWIHAHYIKNSSV 729
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = -2
Query: 257 FPTPATILHRINSQAIRFLWN-----SKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALME 93
FP P ++L +I + FLW S++SP+ W ++ P+ GL I D+ WN A +
Sbjct: 200 FPFPKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLM 259
Query: 92 KALLNIHSKKDSLWVKWVHHNYFSQQSV 9
K L N+ SK+DSLWVKW+ Y + +
Sbjct: 260 KLLWNLSSKEDSLWVKWIQAYYVKRSEL 287
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 68.9 bits (167), Expect = 7e-10
Identities = 36/89 (40%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = -2
Query: 257 FPTPATILHRINSQAIRFLW-----NSKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALME 93
F P + I FLW NSK++ I WN+V PK E GLG+R L + N
Sbjct: 382 FQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCL 441
Query: 92 KALLNIHSKKDSLWVKWVHHNYFSQQSVW 6
K + I S DSLWVKWV HN ++ W
Sbjct: 442 KLVWRIISHGDSLWVKWVEHNLLKREIFW 470
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Frame = -2
Query: 260 IFPTPATILHRINSQAIRFLWN-----SKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALM 96
+F PA I+ I +LW+ +K++ I W+KV PK E GLG+ +L WN + +
Sbjct: 621 LFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAV 680
Query: 95 EKALLNIHSKKDSLWVKWVHHNYFSQQSVWE 3
K ++ +K+D LW+KW+H Y Q W+
Sbjct: 681 TKLCWDLANKEDKLWIKWIHAYYIKGQREWK 711
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = -2
Query: 263 AIFPTPATILHRINSQAIRFLWNS-----KQSPIGWNKVTLPK*ESGLGIRDLSKWNLAL 99
++FP P ++ +I+S F+W+ ++S + W +V P GL + +L WN+
Sbjct: 301 SVFPMPKKVIQKIDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTA 360
Query: 98 MEKALLNIHSKKDSLWVKWVHHNYFSQQSV 9
M K L NI SK+D+LWVKW+H + +V
Sbjct: 361 MLKCLWNICSKEDNLWVKWIHAYFLKGDNV 390
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = -2
Query: 257 FPTPATILHRINSQAIRFLWNS-----KQSPIGWNKVTLPK*ESGLGIRDLSKWNLALME 93
F P+ L INS FLW+ +++ + W+ + PK E GLG+R L++ N+ +
Sbjct: 234 FRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVL 293
Query: 92 KALLNIHSKKDSLWVKWVHHNYFSQQSVW 6
K + + S DSLWVKW N Q+S W
Sbjct: 294 KLIWRVTSNDDSLWVKWSKMNLLKQESFW 322
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = -2
Query: 257 FPTPATILHRINSQAIRFLWN-----SKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALME 93
F P + RI S RFLW+ +K + W + LPK E GLG+R L +WN L
Sbjct: 822 FLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSM 881
Query: 92 KALLNIHSKKDSLWVKWVHHNYFSQQSVW 6
+ + + KDSLW W H ++ S+ S W
Sbjct: 882 RLIWRLFVAKDSLWADWQHLHHLSRGSFW 910
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = -2
Query: 260 IFPTPATILHRINSQAIRFLWN-----SKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALM 96
IFP ++ + +FLW +K++P+ W + PK G + ++ WN A M
Sbjct: 813 IFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAM 872
Query: 95 EKALLNIHSKKDSLWVKWVHHNYFSQQSV 9
K L I K+D LWV+W+H Y +Q +
Sbjct: 873 LKLLWAIEFKRDKLWVRWIHSYYIKRQDI 901
>ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 192
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = -2
Query: 260 IFPTPATILHRINSQAIRFLWNS----KQSP-IGWNKVTLPK*ESGLGIRDLSKWNLALM 96
IF P +++ IN+ FLW K P + W+ V PK E GLG+ +L WNLAL+
Sbjct: 108 IFSLPQSVMDWINASCRNFLWGKADIGKNKPLVAWSVVCSPKKEGGLGLLNLKDWNLALL 167
Query: 95 EKALLNIHSKKDSLW 51
+ L + H KKDSLW
Sbjct: 168 SRILWDFHCKKDSLW 182
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = -2
Query: 257 FPTPATILHRINSQAIRFLW-----NSKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALME 93
F P+ L INS FLW N +++ + W+ + PK + GLG+R L++ N+ +
Sbjct: 746 FRLPSACLKEINSICSAFLWSGPELNRRKAKVSWDDICKPK-QGGLGLRSLTEANVVSVL 804
Query: 92 KALLNIHSKKDSLWVKWVHHNYFSQQSVW 6
K + + S DSLWVKW N Q+S W
Sbjct: 805 KLIWRVTSNDDSLWVKWSKMNLLKQESFW 833
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = -2
Query: 260 IFPTPATILHRINSQAIRFLWN-----SKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALM 96
IFP P ++ + + +FLW S ++P+ W+ + PK GL + ++ WN A +
Sbjct: 816 IFPLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAI 875
Query: 95 EKALLNIHSKKDSLWVKWVHHNYFSQQSV 9
K L I K+D LWV+WV+ Y +Q++
Sbjct: 876 LKLLWAITFKQDKLWVRWVNAYYIKRQNI 904
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = -2
Query: 257 FPTPATILHRINSQAIRFLW-----NSKQSPIGWNKVTLPK*ESGLGIRDLSKWNLALME 93
F P + I+ +LW N+ ++ I W V PK E GLG+R L + N
Sbjct: 211 FRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCL 270
Query: 92 KALLNIHSKKDSLWVKWVHHNYFSQQSVW 6
K + I S DSLWVKW+H Q S W
Sbjct: 271 KLIWRIISHADSLWVKWIHATLLKQVSFW 299
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = -2
Query: 263 AIFPTPATILHRINSQAIRFLW-----NSKQSPIGWNKVTLPK*ESGLGIRDLSKWNLAL 99
++F P L I FLW N+K++ I W++V K E GLG++ L + N
Sbjct: 974 SVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVS 1033
Query: 98 MEKALLNIHSKKDSLWVKWVHHNYFSQQSVW 6
+ K + I S +DSLWVKWV+ + +++ W
Sbjct: 1034 LLKLIWRILSARDSLWVKWVNKHLIRKETFW 1064
>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 342
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Frame = -2
Query: 236 LHRINSQAIR-FLWNSKQ-----SPIGWNKVTLPK*ESGLGIRDLSKWNLALMEKALLNI 75
+HR + +R +LW K+ + +GW++V LP E GL IRD S WN+A K L +
Sbjct: 3 VHRDVDKILRAYLWRGKEEGRSGAKVGWDEVCLPFDEGGLNIRDGSSWNIASTLKILWLL 62
Query: 74 HSKKDSLWVKWVHHNYFSQQSVWE 3
K SLWV WV +S+WE
Sbjct: 63 LVKSGSLWVSWVESYILKGRSLWE 86
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = -2
Query: 263 AIFPTPATILHRINSQAIRFLW-----NSKQSPIGWNKVTLPK*ESGLGIRDLSKWNLAL 99
A F P + + FLW NS ++ I W+ V PK E GLG+R L + N
Sbjct: 827 AAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVC 886
Query: 98 MEKALLNIHSKKDSLWVKWVHHNYFSQQSVWE 3
K + I S +SLWVKWV + S WE
Sbjct: 887 CLKLVWKIVSHSNSLWVKWVDQHLLRNASFWE 918