BLASTX nr result
ID: Rauwolfia21_contig00041874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00041874
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A... 61 2e-07
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 60 2e-07
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 59 5e-07
gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ... 59 9e-07
gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [... 58 1e-06
gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus pe... 57 3e-06
gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [... 57 3e-06
ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] g... 56 6e-06
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 56 6e-06
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 56 6e-06
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 56 6e-06
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 55 7e-06
>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 719
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFW--ENGSCLI*CN 97
PK +GGLGL+ +N+ +A +W ++++ + L + KY + E+ + + +
Sbjct: 398 PKHRGGLGLKKTADMNQAMLAKASWRIFQNDHGL-WADIYRKKYLQDCCIESSNSIAPAD 456
Query: 96 CSHVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
CS+ WR +V G+ L+ ++W +G+GA I+FW
Sbjct: 457 CSNTWRGIVHGVELMRRNLKWRIGDGAKIKFW 488
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCL---I*C 100
PK++GGLG RNL+ N +A W L + N+L V C R+++N S L I
Sbjct: 1210 PKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSL----VACILKARYFKNCSILEAQIGH 1265
Query: 99 NCSHVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
+ S++W+SL K L+ RW +GNG +R W
Sbjct: 1266 SPSYIWQSLCKARVLIEKGSRWRIGNGHSVRIW 1298
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/89 (37%), Positives = 49/89 (55%)
Frame = -3
Query: 267 KEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCLI*CNCSH 88
KEKGGLG R+L N ++ AW L + ++L G VL A+Y + C S+
Sbjct: 429 KEKGGLGFRDLHLFNLAMLSRQAWRLLTNPDSL-CGQVLKARYFPHSDILHCSPRPRISY 487
Query: 87 VWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
WRS++KG+ LL + W +GNG ++ W
Sbjct: 488 TWRSILKGVALLKEGIIWRIGNGKNVKIW 516
>gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
gi|31433076|gb|AAP54636.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 791
Score = 58.5 bits (140), Expect = 9e-07
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCL---I*C 100
PK GGLG R+ W N+ +A AW L + ++L VL AKY + +GS +
Sbjct: 257 PKSLGGLGFRDYWLFNQALLARQAWRLITYPDSL-CARVLKAKY---FPHGSLIDTSFGS 312
Query: 99 NCSHVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
N S WRS+ G+ LL + W +GNG IR W
Sbjct: 313 NSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIW 345
>gb|EMJ25392.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/90 (36%), Positives = 49/90 (54%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCLI*CNCS 91
PK++GGLG RNL+ N V +A W L + N+L +L A+Y + I + S
Sbjct: 660 PKQEGGLGFRNLYAFNMVLLAKQLWRLIQTPNSL-VARILKARYFKNCSILEAQIGHSPS 718
Query: 90 HVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
++W+SL K L+ RW +GNG +R W
Sbjct: 719 YIWQSLCKARVLIEKGSRWRIGNGHSVRIW 748
>gb|EMJ11427.1| hypothetical protein PRUPE_ppa015539mg [Prunus persica]
Length = 787
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCLI*CNCS 91
PK++GGLG RNL+ N +A W L + N+L +L A+Y + I + S
Sbjct: 442 PKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSL-VARILKARYFKNCSILEAQIGHSPS 500
Query: 90 HVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
++W+SL K L+ RW +GNG +R W
Sbjct: 501 YIWQSLCKARVLIEKGSRWRIGNGHSVRIW 530
>gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 56.6 bits (135), Expect = 3e-06
Identities = 31/90 (34%), Positives = 49/90 (54%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCLI*CNCS 91
PK++GGLG RNL+ N +A W L + N+L +L A+Y + I + S
Sbjct: 1096 PKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSL-VARILKARYFKNCSILEAQIGHSPS 1154
Query: 90 HVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
++W+SL K L+ + +W +GNG +R W
Sbjct: 1155 YIWQSLCKARVLIEKESQWRIGNGHSVRIW 1184
>ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] gi|77548275|gb|ABA91072.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group] gi|255679693|dbj|BAH95030.1|
Os11g0106066 [Oryza sativa Japonica Group]
Length = 1690
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCL---I*C 100
PK GGLG R+ N+ +A AW L N+L VL AKY + NGS +
Sbjct: 1335 PKFCGGLGFRDYRLFNQALLARQAWRLLEFPNSL-CARVLKAKY---FPNGSLIDTTFSS 1390
Query: 99 NCSHVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
N S WR+++ G+ LL + W +GNG IR W
Sbjct: 1391 NVSPTWRAIIYGLELLKKGIIWRVGNGQSIRMW 1423
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/90 (34%), Positives = 47/90 (52%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCLI*CNCS 91
P+ +GGLGLR N + +AW ++ + + L VL KY + + NCS
Sbjct: 1383 PRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVK-VLREKYVKNADFLHLQSQSNCS 1441
Query: 90 HVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
WRS++KG +L ++W +GNG I FW
Sbjct: 1442 WGWRSIMKGKDVLAGAIKWNVGNGRKINFW 1471
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/90 (34%), Positives = 47/90 (52%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCLI*CNCS 91
P+ +GGLGLR N + +AW ++ + + L VL KY + + NCS
Sbjct: 851 PRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVK-VLREKYVKNADFLHLQSQSNCS 909
Query: 90 HVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
WRS++KG +L ++W +GNG I FW
Sbjct: 910 WGWRSIMKGKDVLAGAIKWNVGNGRKINFW 939
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/90 (34%), Positives = 47/90 (52%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKYGRFWENGSCLI*CNCS 91
P+ +GGLGLR N + +AW ++ + + L VL KY + + NCS
Sbjct: 851 PRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVK-VLREKYVKNADFLHLQSQSNCS 909
Query: 90 HVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
WRS++KG +L ++W +GNG I FW
Sbjct: 910 WGWRSIMKGKDVLAGAIKWNVGNGRKINFW 939
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 55.5 bits (132), Expect = 7e-06
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Frame = -3
Query: 270 PKEKGGLGLRNLWQLNEVSMANLAWGLYRHRNAL*TGGVLCAKY---GRFW--ENGSCLI 106
PK +GGLG RN+ N+ +A W + ++L T L AKY G F E GS
Sbjct: 807 PKNEGGLGFRNMELFNQALLAKKGWRIINSLDSLVTR-TLKAKYFPSGHFLKAEMGS--- 862
Query: 105 *CNCSHVWRSLVKGIPLLLSQVRW*LGNGAYIRFW 1
+ S+VWRSL+KG LL +R+ +GNG I W
Sbjct: 863 --DASYVWRSLLKGRDLLRKGIRYHVGNGESISVW 895