BLASTX nr result

ID: Rauwolfia21_contig00041862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00041862
         (668 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360427.1| PREDICTED: ATP synthase subunit beta, mitoch...    57   7e-06
ref|XP_004236964.1| PREDICTED: ATP synthase subunit beta, mitoch...    57   7e-06
gb|AAD03392.1| mitochondrial ATPase beta subunit [Nicotiana sylv...    57   7e-06
gb|AAD03391.1| mitochondrial ATPase beta subunit [Nicotiana sylv...    57   7e-06
gb|AAD03393.1| ATPase beta subunit [Nicotiana sylvestris]              57   7e-06
sp|P17614.1|ATPBM_NICPL RecName: Full=ATP synthase subunit beta,...    57   7e-06
ref|NP_680155.1| ATP synthase subunit beta-3 [Arabidopsis thalia...    56   9e-06
ref|NP_568204.1| ATP synthase subunit beta-2 [Arabidopsis thalia...    56   9e-06
ref|XP_002871356.1| ATP synthase beta chain 1, mitochondrial [Ar...    56   9e-06
emb|CAC81058.1| mitochondrial F1 ATP synthase beta subunit [Arab...    56   9e-06
ref|XP_002871355.1| hypothetical protein ARALYDRAFT_487710 [Arab...    56   9e-06
ref|NP_568203.2| ATP synthase subunit beta-1 [Arabidopsis thalia...    56   9e-06
dbj|BAF01799.1| H+-transporting ATP synthase beta chain (mitocho...    56   9e-06
gb|AAN31935.1| unknown protein [Arabidopsis thaliana]                  56   9e-06

>ref|XP_006360427.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Solanum
           tuberosum]
          Length = 562

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEVIAKA+KIAKESAA
Sbjct: 534 DLSEQSFYMVGGIDEVIAKAEKIAKESAA 562


>ref|XP_004236964.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Solanum
           lycopersicum]
          Length = 562

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEVIAKA+KIAKESAA
Sbjct: 534 DLSEQSFYMVGGIDEVIAKAEKIAKESAA 562


>gb|AAD03392.1| mitochondrial ATPase beta subunit [Nicotiana sylvestris]
          Length = 556

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEVIAKA+KIAKESAA
Sbjct: 528 DLSEQSFYMVGGIDEVIAKAEKIAKESAA 556


>gb|AAD03391.1| mitochondrial ATPase beta subunit [Nicotiana sylvestris]
          Length = 561

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEVIAKA+KIAKESAA
Sbjct: 533 DLSEQSFYMVGGIDEVIAKAEKIAKESAA 561


>gb|AAD03393.1| ATPase beta subunit [Nicotiana sylvestris]
          Length = 555

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEVIAKA+KIAKESAA
Sbjct: 527 DLSEQSFYMVGGIDEVIAKAEKIAKESAA 555


>sp|P17614.1|ATPBM_NICPL RecName: Full=ATP synthase subunit beta, mitochondrial; Flags:
           Precursor gi|19685|emb|CAA26620.1| ATP synthase beta
           subunit [Nicotiana plumbaginifolia]
          Length = 560

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEVIAKA+KIAKESAA
Sbjct: 532 DLSEQSFYMVGGIDEVIAKAEKIAKESAA 560


>ref|NP_680155.1| ATP synthase subunit beta-3 [Arabidopsis thaliana]
           gi|75333362|sp|Q9C5A9.1|ATPBO_ARATH RecName: Full=ATP
           synthase subunit beta-3, mitochondrial; Flags: Precursor
           gi|13548326|emb|CAC35873.1| H+-transporting ATP synthase
           beta chain (mitochondrial)-like protein [Arabidopsis
           thaliana] gi|26450906|dbj|BAC42560.1| putative
           H+-transporting ATP synthase beta chain (mitochondrial)
           [Arabidopsis thaliana] gi|29028952|gb|AAO64855.1|
           At5g08680 [Arabidopsis thaliana]
           gi|332003954|gb|AED91337.1| ATP synthase subunit beta-3
           [Arabidopsis thaliana]
          Length = 559

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEV+AKA+KIAKESAA
Sbjct: 531 DLSEQSFYMVGGIDEVVAKAEKIAKESAA 559


>ref|NP_568204.1| ATP synthase subunit beta-2 [Arabidopsis thaliana]
           gi|26391492|sp|P83484.1|ATPBN_ARATH RecName: Full=ATP
           synthase subunit beta-2, mitochondrial; Flags: Precursor
           gi|13548327|emb|CAC35874.1| H+-transporting ATP synthase
           beta chain (mitochondrial)-like protein [Arabidopsis
           thaliana] gi|15293123|gb|AAK93672.1| unknown protein
           [Arabidopsis thaliana] gi|19310683|gb|AAL85072.1|
           unknown protein [Arabidopsis thaliana]
           gi|21281109|gb|AAM44896.1| unknown protein [Arabidopsis
           thaliana] gi|26452188|dbj|BAC43182.1| putative
           H+-transporting ATP synthase beta chain (mitochondrial)
           [Arabidopsis thaliana] gi|332003955|gb|AED91338.1| ATP
           synthase subunit beta-2 [Arabidopsis thaliana]
          Length = 556

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEV+AKA+KIAKESAA
Sbjct: 528 DLSEQSFYMVGGIDEVVAKAEKIAKESAA 556


>ref|XP_002871356.1| ATP synthase beta chain 1, mitochondrial [Arabidopsis lyrata subsp.
           lyrata] gi|297810985|ref|XP_002873376.1| ATP synthase
           beta chain 1, mitochondrial [Arabidopsis lyrata subsp.
           lyrata] gi|26391487|sp|P83483.1|ATPBM_ARATH RecName:
           Full=ATP synthase subunit beta-1, mitochondrial; Flags:
           Precursor gi|13548325|emb|CAC35872.1| H+-transporting
           ATP synthase beta chain (mitochondrial)-like protein
           [Arabidopsis thaliana] gi|15809909|gb|AAL06882.1|
           At5g08670 [Arabidopsis thaliana]
           gi|19347814|gb|AAL86357.1| unknown protein [Arabidopsis
           thaliana] gi|21360569|gb|AAM47481.1| At5g08670/At5g08670
           [Arabidopsis thaliana] gi|21436349|gb|AAM51344.1|
           unknown protein [Arabidopsis thaliana]
           gi|26452103|dbj|BAC43141.1| putative H+-transporting ATP
           synthase beta chain (mitochondrial) [Arabidopsis
           thaliana] gi|297317193|gb|EFH47615.1| ATP synthase beta
           chain 1, mitochondrial [Arabidopsis lyrata subsp.
           lyrata] gi|297319213|gb|EFH49635.1| ATP synthase beta
           chain 1, mitochondrial [Arabidopsis lyrata subsp.
           lyrata]
          Length = 556

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEV+AKA+KIAKESAA
Sbjct: 528 DLSEQSFYMVGGIDEVVAKAEKIAKESAA 556


>emb|CAC81058.1| mitochondrial F1 ATP synthase beta subunit [Arabidopsis thaliana]
          Length = 589

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEV+AKA+KIAKESAA
Sbjct: 561 DLSEQSFYMVGGIDEVVAKAEKIAKESAA 589


>ref|XP_002871355.1| hypothetical protein ARALYDRAFT_487710 [Arabidopsis lyrata subsp.
           lyrata] gi|297317192|gb|EFH47614.1| hypothetical protein
           ARALYDRAFT_487710 [Arabidopsis lyrata subsp. lyrata]
          Length = 559

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEV+AKA+KIAKESAA
Sbjct: 531 DLSEQSFYMVGGIDEVVAKAEKIAKESAA 559


>ref|NP_568203.2| ATP synthase subunit beta-1 [Arabidopsis thaliana]
           gi|332003953|gb|AED91336.1| ATP synthase subunit beta-1
           [Arabidopsis thaliana]
          Length = 556

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEV+AKA+KIAKESAA
Sbjct: 528 DLSEQSFYMVGGIDEVVAKAEKIAKESAA 556


>dbj|BAF01799.1| H+-transporting ATP synthase beta chain (mitochondrial) -like
           protein [Arabidopsis thaliana]
          Length = 192

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEV+AKA+KIAKESAA
Sbjct: 164 DLSEQSFYMVGGIDEVVAKAEKIAKESAA 192


>gb|AAN31935.1| unknown protein [Arabidopsis thaliana]
          Length = 446

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 3   DLSEQSFYMVGGIDEVIAKADKIAKESAA 89
           DLSEQSFYMVGGIDEV+AKA+KIAKESAA
Sbjct: 418 DLSEQSFYMVGGIDEVVAKAEKIAKESAA 446


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