BLASTX nr result
ID: Rauwolfia21_contig00040721
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00040721
(440 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004240880.1| PREDICTED: high mobility group B protein 7-l... 139 5e-31
ref|XP_006361309.1| PREDICTED: high mobility group B protein 7-l... 131 1e-28
ref|XP_002325813.2| hypothetical protein POPTR_0019s07560g [Popu... 119 4e-25
gb|EXB25880.1| hypothetical protein L484_012307 [Morus notabilis] 116 3e-24
ref|XP_006486515.1| PREDICTED: high mobility group B protein 7-l... 116 3e-24
ref|XP_006435868.1| hypothetical protein CICLE_v10032767mg [Citr... 116 3e-24
ref|XP_006435867.1| hypothetical protein CICLE_v10032767mg [Citr... 116 3e-24
ref|XP_002520840.1| DNA binding protein, putative [Ricinus commu... 111 9e-23
ref|XP_003633450.1| PREDICTED: uncharacterized protein LOC100853... 110 3e-22
emb|CAN84129.1| hypothetical protein VITISV_041872 [Vitis vinifera] 107 1e-21
gb|EPS71428.1| hypothetical protein M569_03340, partial [Genlise... 103 2e-20
gb|EOY20043.1| HMG-box DNA-binding family protein, putative [The... 103 3e-20
ref|XP_004491066.1| PREDICTED: uncharacterized protein LOC101502... 100 2e-19
dbj|BAB09976.1| unnamed protein product [Arabidopsis thaliana] 96 6e-18
ref|NP_196152.2| HMG-box (high mobility group) DNA-binding famil... 96 6e-18
gb|EMJ20973.1| hypothetical protein PRUPE_ppa024410mg, partial [... 95 8e-18
ref|XP_006288738.1| hypothetical protein CARUB_v10002047mg [Caps... 91 1e-16
ref|XP_002873206.1| predicted protein [Arabidopsis lyrata subsp.... 90 4e-16
ref|XP_006398995.1| hypothetical protein EUTSA_v10014946mg [Eutr... 89 5e-16
gb|AAZ52752.1| hypothetical protein At5g05330 [Arabidopsis thali... 80 2e-13
>ref|XP_004240880.1| PREDICTED: high mobility group B protein 7-like [Solanum
lycopersicum]
Length = 212
Score = 139 bits (349), Expect = 5e-31
Identities = 71/114 (62%), Positives = 88/114 (77%), Gaps = 5/114 (4%)
Frame = -2
Query: 328 SMVYQSGTRKRVFAVR--RGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQ 155
SM+YQ+ TRKRVF ++ RGPDGSAF+KCE+CG SVAIALADMHEC+P+KNVKKLK CQ
Sbjct: 35 SMMYQARTRKRVFGIQIHRGPDGSAFQKCETCGVSVAIALADMHECEPRKNVKKLK--CQ 92
Query: 154 SGN---AKGRNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
+ KG+ QPRSAFR FME+FVK + D NE +VD +G ETWK M+++
Sbjct: 93 PRSRTIVKGKRLIHQPRSAFRIFMEDFVKK-NIDGNEFEVDNRGFETWKNMTRK 145
>ref|XP_006361309.1| PREDICTED: high mobility group B protein 7-like [Solanum tuberosum]
Length = 177
Score = 131 bits (329), Expect = 1e-28
Identities = 67/111 (60%), Positives = 85/111 (76%), Gaps = 3/111 (2%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVR--RGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQS 152
M+YQ+ TRKR F ++ RGPDGSAF+KCE+CG SVAIALADMHEC+P+K+VKKLK +S
Sbjct: 1 MMYQARTRKRDFGIQIHRGPDGSAFQKCETCGISVAIALADMHECEPRKDVKKLKCQPRS 60
Query: 151 GN-AKGRNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
N K + QPRSAFR FME+FVK + D NE +VD +G ETWK M+++
Sbjct: 61 RNIVKEKRLIHQPRSAFRIFMEDFVKK-NIDGNEFEVDNRGFETWKNMTRK 110
>ref|XP_002325813.2| hypothetical protein POPTR_0019s07560g [Populus trichocarpa]
gi|550316951|gb|EEF00195.2| hypothetical protein
POPTR_0019s07560g [Populus trichocarpa]
Length = 213
Score = 119 bits (298), Expect = 4e-25
Identities = 61/104 (58%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Frame = -2
Query: 307 TRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQ--PKKNVKKLKGYCQSGNAKGR 134
TRKRV +RR PDGSAFE C +CG VAIALAD+HEC+ K NVK+ KG N +
Sbjct: 7 TRKRVRGIRRAPDGSAFENCNNCGVLVAIALADLHECEAGTKNNVKRFKGLDGKQNVVQQ 66
Query: 133 NFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
+F DQPRS FR FME+F+K+ N ID+DRKG ETW+ MSKE
Sbjct: 67 SFCDQPRSPFRLFMEDFMKT-GKIWNTIDIDRKGFETWRNMSKE 109
>gb|EXB25880.1| hypothetical protein L484_012307 [Morus notabilis]
Length = 162
Score = 116 bits (291), Expect = 3e-24
Identities = 59/102 (57%), Positives = 74/102 (72%)
Frame = -2
Query: 307 TRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGNAKGRNF 128
TRKRV A+ R PDGSAF CG SVAI+LADMHEC+ + VK+ +G +S N + F
Sbjct: 7 TRKRVRAIPRAPDGSAFRNW--CGVSVAISLADMHECESSQKVKRFRGIQKSPNVQKGRF 64
Query: 127 RDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
DQPRS F FFMEEF K+C++ ++ I++DRKG ETWK MSKE
Sbjct: 65 WDQPRSPFCFFMEEFKKTCESGDS-IEIDRKGFETWKNMSKE 105
>ref|XP_006486515.1| PREDICTED: high mobility group B protein 7-like [Citrus sinensis]
Length = 176
Score = 116 bits (291), Expect = 3e-24
Identities = 62/111 (55%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQP--KKNVKKLKGYCQS 152
M Q TRKRV A+RR PDGSAFEKC+ C A V IAL DMHEC+ K VK+ KG C+
Sbjct: 1 MANQPRTRKRVHAIRRAPDGSAFEKCDRCEAMVPIALVDMHECEAKVKNKVKRFKGVCEK 60
Query: 151 GN-AKGRNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
K ++ DQ RS FR FME FV++C + E ID+D+KG E WK MSKE
Sbjct: 61 PKLVKQDSYSDQIRSPFRIFMETFVETCGSRE-LIDIDQKGFEKWKNMSKE 110
>ref|XP_006435868.1| hypothetical protein CICLE_v10032767mg [Citrus clementina]
gi|557538064|gb|ESR49108.1| hypothetical protein
CICLE_v10032767mg [Citrus clementina]
Length = 205
Score = 116 bits (291), Expect = 3e-24
Identities = 62/111 (55%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQP--KKNVKKLKGYCQS 152
M Q TRKRV A+RR PDGSAFEKC+ C A V IAL DMHEC+ K VK+ KG C+
Sbjct: 1 MANQPRTRKRVHAIRRAPDGSAFEKCDRCEAMVPIALVDMHECEAKVKNKVKRFKGVCEK 60
Query: 151 GN-AKGRNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
K ++ DQ RS FR FME FV++C + E ID+D+KG E WK MSKE
Sbjct: 61 PKLVKQDSYSDQIRSPFRIFMETFVETCGSRE-LIDIDQKGFEKWKNMSKE 110
>ref|XP_006435867.1| hypothetical protein CICLE_v10032767mg [Citrus clementina]
gi|557538063|gb|ESR49107.1| hypothetical protein
CICLE_v10032767mg [Citrus clementina]
Length = 157
Score = 116 bits (291), Expect = 3e-24
Identities = 62/111 (55%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQP--KKNVKKLKGYCQS 152
M Q TRKRV A+RR PDGSAFEKC+ C A V IAL DMHEC+ K VK+ KG C+
Sbjct: 1 MANQPRTRKRVHAIRRAPDGSAFEKCDRCEAMVPIALVDMHECEAKVKNKVKRFKGVCEK 60
Query: 151 GN-AKGRNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
K ++ DQ RS FR FME FV++C + E ID+D+KG E WK MSKE
Sbjct: 61 PKLVKQDSYSDQIRSPFRIFMETFVETCGSRE-LIDIDQKGFEKWKNMSKE 110
>ref|XP_002520840.1| DNA binding protein, putative [Ricinus communis]
gi|223539971|gb|EEF41549.1| DNA binding protein,
putative [Ricinus communis]
Length = 209
Score = 111 bits (278), Expect = 9e-23
Identities = 58/104 (55%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
Frame = -2
Query: 307 TRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHEC--QPKKNVKKLKGYCQSGNAKGR 134
T KRV A+RRG DGSAFE C+ CG VAIALADMHEC + K+ VK+ KG +
Sbjct: 7 TGKRVHAIRRGHDGSAFETCDDCGFLVAIALADMHECEAETKRIVKRFKGVIGKHKIVKQ 66
Query: 133 NFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
N+ DQPRS F FMEEF ++C + I++DRKG ETW+KMSK+
Sbjct: 67 NYSDQPRSPFVTFMEEFRRTC-KNGKLIEIDRKGFETWRKMSKQ 109
>ref|XP_003633450.1| PREDICTED: uncharacterized protein LOC100853686 [Vitis vinifera]
Length = 267
Score = 110 bits (274), Expect = 3e-22
Identities = 60/106 (56%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Frame = -2
Query: 307 TRKRVFAV----RRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGNAK 140
TRKRV A+ RRGPDGSAFEKC CG SVAIALADMH+C K++VK+ KG N +
Sbjct: 7 TRKRVHAIASGFRRGPDGSAFEKCHGCGVSVAIALADMHDCGLKRDVKRFKGQRGVQNLR 66
Query: 139 GRNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
+ +PRS FR FME F K+ N I VDR G E WKKMS E
Sbjct: 67 KQTCLGEPRSPFRLFMENFRKASKTG-NPIHVDRIGFEAWKKMSME 111
>emb|CAN84129.1| hypothetical protein VITISV_041872 [Vitis vinifera]
Length = 217
Score = 107 bits (268), Expect = 1e-21
Identities = 59/106 (55%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Frame = -2
Query: 307 TRKRVFAV----RRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGNAK 140
TRKRV A+ RRGPDGSAFEKC CG SVAIALADMH+C ++VK+ KG N +
Sbjct: 7 TRKRVHAIASGFRRGPDGSAFEKCHGCGVSVAIALADMHDCGLXRDVKRFKGQRGVQNLR 66
Query: 139 GRNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
+ +PRS FR FME F K+ N I VDR G E WKKMS E
Sbjct: 67 KQTCLGEPRSPFRLFMENFRKASKTG-NPIHVDRIGFEAWKKMSME 111
>gb|EPS71428.1| hypothetical protein M569_03340, partial [Genlisea aurea]
Length = 109
Score = 103 bits (257), Expect = 2e-20
Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = -2
Query: 304 RKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGNAKGRNFR 125
RKRV A+ RGPDGSAF+KCE CG +VAIALADMHEC N K++K N
Sbjct: 1 RKRVRAILRGPDGSAFKKCEYCGLTVAIALADMHECLLLVN-KRMK--------SNWNVL 51
Query: 124 DQPRSAFRFFMEEFVKSCDADE-NEIDVDRKGVETWKKMS 8
DQPRSAFRFFM+E++K + +E N I++D +G E WK MS
Sbjct: 52 DQPRSAFRFFMDEYMKEMECEEGNAIEMDNRGCEIWKIMS 91
>gb|EOY20043.1| HMG-box DNA-binding family protein, putative [Theobroma cacao]
Length = 215
Score = 103 bits (256), Expect = 3e-20
Identities = 59/105 (56%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Frame = -2
Query: 307 TRKRVFAV--RRGPDGSAFEKCESCGASVAIALADMHEC-QPKKNVKKLKGYCQSGNAKG 137
TRKRV A RR PDGSAFEKC+ CG VAIALADMHEC KK +K+ KG + N
Sbjct: 7 TRKRVHATIPRRAPDGSAFEKCDVCGDMVAIALADMHECGTEKKELKRFKGIVGTQNVVK 66
Query: 136 RNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
QPRSAF FME F+ + + N ID+DR+G ETWK M KE
Sbjct: 67 PMVPWQPRSAFSIFMESFMID-NNNGNFIDIDRRGFETWKNMCKE 110
>ref|XP_004491066.1| PREDICTED: uncharacterized protein LOC101502301 [Cicer arietinum]
Length = 316
Score = 100 bits (249), Expect = 2e-19
Identities = 51/103 (49%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Frame = -2
Query: 301 KRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGNAKGRN--- 131
KRVF +RR PDGSAF KC +CG S+AIALADMH C+ K VK+ KG + +N
Sbjct: 9 KRVFPIRRAPDGSAFHKCGACGVSIAIALADMHYCESKMEVKRFKGTVGMLSLPKKNQQL 68
Query: 130 FRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
++QP S +R FME F+K E+ +++DR G E WK MS+E
Sbjct: 69 IKNQPVSPYRLFMESFMKG-HGMESYVEIDRIGFEKWKNMSEE 110
>dbj|BAB09976.1| unnamed protein product [Arabidopsis thaliana]
Length = 221
Score = 95.5 bits (236), Expect = 6e-18
Identities = 54/113 (47%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGN 146
M + TRKRV AVRR DGSAF+KCE CG +AIAL DMHEC K+ K Y SGN
Sbjct: 34 MAIRPRTRKRVQAVRRAADGSAFKKCEECGVMIAIALYDMHECGEKRREVKRFKYIASGN 93
Query: 145 AKG-----RNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
+F D+PRS F FF+EEF ++ + D +D R WK MS E
Sbjct: 94 IDNISKPIGSFEDEPRSPFVFFLEEFRENYNGD--LVDASRICFNVWKNMSAE 144
>ref|NP_196152.2| HMG-box (high mobility group) DNA-binding family protein
[Arabidopsis thaliana] gi|61742741|gb|AAX55191.1|
hypothetical protein At5g05330 [Arabidopsis thaliana]
gi|71905543|gb|AAZ52749.1| hypothetical protein
At5g05330 [Arabidopsis thaliana]
gi|332003475|gb|AED90858.1| HMG-box (high mobility
group) DNA-binding family protein [Arabidopsis thaliana]
Length = 220
Score = 95.5 bits (236), Expect = 6e-18
Identities = 54/113 (47%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGN 146
M + TRKRV AVRR DGSAF+KCE CG +AIAL DMHEC K+ K Y SGN
Sbjct: 33 MAIRPRTRKRVQAVRRAADGSAFKKCEECGVMIAIALYDMHECGEKRREVKRFKYIASGN 92
Query: 145 AKG-----RNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
+F D+PRS F FF+EEF ++ + D +D R WK MS E
Sbjct: 93 IDNISKPIGSFEDEPRSPFVFFLEEFRENYNGD--LVDASRICFNVWKNMSAE 143
>gb|EMJ20973.1| hypothetical protein PRUPE_ppa024410mg, partial [Prunus persica]
Length = 164
Score = 95.1 bits (235), Expect = 8e-18
Identities = 51/104 (49%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Frame = -2
Query: 307 TRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGNAKGRNF 128
TRKRV + R DGSAF+KC +CGASV IALA MHEC VK+ KG C + + ++F
Sbjct: 7 TRKRVHGIPRAADGSAFQKCNTCGASVPIALAGMHECDLNPKVKRFKGVCL--DVQQQSF 64
Query: 127 RDQ--PRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
DQ S F FFM+EF K+ A N + ++R+G E WK MS++
Sbjct: 65 YDQLIVMSPFHFFMKEFTKTSKAG-NWVAINREGFEAWKNMSEK 107
>ref|XP_006288738.1| hypothetical protein CARUB_v10002047mg [Capsella rubella]
gi|482557444|gb|EOA21636.1| hypothetical protein
CARUB_v10002047mg [Capsella rubella]
Length = 187
Score = 91.3 bits (225), Expect = 1e-16
Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHEC-QPKKNVKKLKGYCQSG 149
M + TRKRV AVRR DGSAFEKCE CG +AIAL DMHEC + +K VK+ K Y SG
Sbjct: 1 MAIRPRTRKRVQAVRRAADGSAFEKCEECGVMIAIALFDMHECGEKRKEVKRFK-YIASG 59
Query: 148 NAKG-----RNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
+ D+PRS F FF+E+F + + N +D R WK MS E
Sbjct: 60 KVDNISKPFGSIEDEPRSPFVFFLEDFREKYNG--NLVDASRICFNVWKYMSPE 111
>ref|XP_002873206.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319043|gb|EFH49465.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 188
Score = 89.7 bits (221), Expect = 4e-16
Identities = 51/113 (45%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGN 146
M + TRKRV AVRR DGSAF+KCE CG +AI L DMHEC K+ K Y SGN
Sbjct: 1 MAIRPRTRKRVQAVRRAADGSAFKKCEECGVMIAIGLFDMHECGEKRREVKRFKYIASGN 60
Query: 145 AKG-----RNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
+F D+PRS F FF+E+F + + N +D R WK M E
Sbjct: 61 VINISKPIGSFEDEPRSPFVFFLEDFREKYNG--NLVDASRICFNVWKNMLPE 111
>ref|XP_006398995.1| hypothetical protein EUTSA_v10014946mg [Eutrema salsugineum]
gi|557100085|gb|ESQ40448.1| hypothetical protein
EUTSA_v10014946mg [Eutrema salsugineum]
Length = 147
Score = 89.4 bits (220), Expect = 5e-16
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHEC-QPKKNVKKLK----GY 161
M + RKRV AVRR DGSAFEKCE CG +AIAL DMHEC + ++ VK+ K G
Sbjct: 1 MAIRPRIRKRVQAVRRAADGSAFEKCEECGLMIAIALFDMHECGENRREVKRFKCISSGK 60
Query: 160 CQSGNAKGRNFRDQPRSAFRFFMEEFVKSCDADENEIDVDRKGVETWKKMSKE 2
++ + +F D+PRS F FF+E+F ++ N +D R WK MS+E
Sbjct: 61 FENISKPVGSFEDEPRSPFVFFLEDFKENYGG--NLVDASRICFNVWKNMSEE 111
>gb|AAZ52752.1| hypothetical protein At5g05330 [Arabidopsis thaliana]
Length = 125
Score = 80.5 bits (197), Expect = 2e-13
Identities = 43/85 (50%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Frame = -2
Query: 325 MVYQSGTRKRVFAVRRGPDGSAFEKCESCGASVAIALADMHECQPKKNVKKLKGYCQSGN 146
M + TRKRV AVRR DGSAF+KCE CG +AIAL DMHEC K+ K Y SGN
Sbjct: 33 MAIRPRTRKRVQAVRRAADGSAFKKCEECGVMIAIALYDMHECGEKRREVKRFKYIASGN 92
Query: 145 AKG-----RNFRDQPRSAFRFFMEE 86
+F D+PRS F FF+ +
Sbjct: 93 IDNISKPIGSFEDEPRSPFVFFLSK 117