BLASTX nr result

ID: Rauwolfia21_contig00040518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00040518
         (262 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004228596.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...    55   1e-05

>ref|XP_004228596.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2-like [Solanum
           lycopersicum]
          Length = 883

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
 Frame = +2

Query: 47  PQRKRPHPDSA------------STDNSKRVDAAXXXXXXXXXXXXXXXXXXXXXALGAK 190
           PQ+KRPH +S             S+DN K VDAA                      L AK
Sbjct: 11  PQKKRPHLNSVFSSPTMARHLKTSSDN-KDVDAAVLQHQNQKLVQQLDAQKHKLHDLEAK 69

Query: 191 LKELRDKQASYDAVLISVNRLWNQ 262
           +KELRDKQASYD  L+++NR+WNQ
Sbjct: 70  MKELRDKQASYDDFLVTLNRIWNQ 93


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