BLASTX nr result

ID: Rauwolfia21_contig00040473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00040473
         (286 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY08115.1| Repressor of gene silencing 1 isoform 3 [Theobrom...    56   6e-06
gb|EOY08114.1| Repressor of gene silencing 1 isoform 2 [Theobrom...    56   6e-06
gb|EOY08113.1| Repressor of gene silencing 1 isoform 1 [Theobrom...    56   6e-06

>gb|EOY08115.1| Repressor of gene silencing 1 isoform 3 [Theobroma cacao]
          Length = 1728

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
 Frame = -2

Query: 279  EFDDVISSQNSAVSPQHSID-SIGQTTNKTDSCYRSSSV----TGPTHNDC--STTSFVE 121
            E +DV+SSQNS VS ++S+D S+ QTT +T SC  S+S     T     D   S+TSFV+
Sbjct: 1072 ETNDVLSSQNSVVSSENSVDLSLVQTTERTGSCSESNSEGVDQTKQPILDILNSSTSFVQ 1131

Query: 120  LLQMAGTTMLHGIYYQGNRKESFN 49
            LLQM  +  LH +Y   N   S N
Sbjct: 1132 LLQMVDSARLHEVYGHQNMSTSEN 1155


>gb|EOY08114.1| Repressor of gene silencing 1 isoform 2 [Theobroma cacao]
          Length = 1885

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
 Frame = -2

Query: 279  EFDDVISSQNSAVSPQHSID-SIGQTTNKTDSCYRSSSV----TGPTHNDC--STTSFVE 121
            E +DV+SSQNS VS ++S+D S+ QTT +T SC  S+S     T     D   S+TSFV+
Sbjct: 1072 ETNDVLSSQNSVVSSENSVDLSLVQTTERTGSCSESNSEGVDQTKQPILDILNSSTSFVQ 1131

Query: 120  LLQMAGTTMLHGIYYQGNRKESFN 49
            LLQM  +  LH +Y   N   S N
Sbjct: 1132 LLQMVDSARLHEVYGHQNMSTSEN 1155


>gb|EOY08113.1| Repressor of gene silencing 1 isoform 1 [Theobroma cacao]
          Length = 1922

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
 Frame = -2

Query: 279  EFDDVISSQNSAVSPQHSID-SIGQTTNKTDSCYRSSSV----TGPTHNDC--STTSFVE 121
            E +DV+SSQNS VS ++S+D S+ QTT +T SC  S+S     T     D   S+TSFV+
Sbjct: 1072 ETNDVLSSQNSVVSSENSVDLSLVQTTERTGSCSESNSEGVDQTKQPILDILNSSTSFVQ 1131

Query: 120  LLQMAGTTMLHGIYYQGNRKESFN 49
            LLQM  +  LH +Y   N   S N
Sbjct: 1132 LLQMVDSARLHEVYGHQNMSTSEN 1155


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