BLASTX nr result
ID: Rauwolfia21_contig00040392
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00040392
(602 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353070.1| PREDICTED: putative E3 ubiquitin-protein lig... 66 8e-09
ref|XP_006495382.1| PREDICTED: putative E3 ubiquitin-protein lig... 65 1e-08
ref|XP_006468438.1| PREDICTED: putative E3 ubiquitin-protein lig... 65 1e-08
ref|XP_006468437.1| PREDICTED: putative E3 ubiquitin-protein lig... 65 1e-08
ref|XP_006468435.1| PREDICTED: putative E3 ubiquitin-protein lig... 65 1e-08
ref|XP_006448745.1| hypothetical protein CICLE_v10014170mg [Citr... 64 2e-08
ref|XP_006448744.1| hypothetical protein CICLE_v10014170mg [Citr... 64 2e-08
gb|EMJ14889.1| hypothetical protein PRUPE_ppa000859mg [Prunus pe... 63 7e-08
ref|XP_002332131.1| predicted protein [Populus trichocarpa] 62 9e-08
ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein lig... 61 2e-07
ref|XP_006376995.1| hypothetical protein POPTR_0012s11910g [Popu... 61 3e-07
emb|CAN67079.1| hypothetical protein VITISV_004500 [Vitis vinifera] 61 3e-07
>ref|XP_006353070.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Solanum
tuberosum]
Length = 1008
Score = 65.9 bits (159), Expect = 8e-09
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Frame = +2
Query: 149 SLLELLSKEGFDGCKRF-IRS*KKVKVRDWSSLD*LIALPIFICDDRRRFTS-QKNNSDK 322
SL ELL+ EGF+ K+ R+ +KVK +D + IALPI+IC DRR K S +
Sbjct: 3 SLQELLADEGFESTKKTPARTHRKVKFKDREDSN-NIALPIYICHDRRSSLDFSKTKSRR 61
Query: 323 PSTMNGSSRKGRQS*GD*IF*GYRSG-------------FVRTVVAILSW*AWQ*YIREK 463
P + SS Q + G +R V++ILS Q Y R+K
Sbjct: 62 PFSSTTSSVHSSQKSNVKSTHTHVEGNIPRRDEPAIDEIAIRAVISILSGFVGQ-YSRDK 120
Query: 464 TIFAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVEN 598
F + + K Y CF++K Y S+D I+A++EL IE I+RLV++
Sbjct: 121 D-FREAIKEKCYACFVRKKNY--SDDGIFADIELAIESIERLVDS 162
>ref|XP_006495382.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like, partial
[Citrus sinensis]
Length = 399
Score = 65.5 bits (158), Expect = 1e-08
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Frame = +2
Query: 149 SLLELLSKEGFD-GCKRFIRS*KKVKVRDWSSLD*-LIALPIFICDDRRRFTSQKNNSDK 322
SL +LL++EGF+ G ++F K +K++D +S D IALPI+IC D + F K SDK
Sbjct: 3 SLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQGSDK 62
Query: 323 -----PSTMNGSSRKGRQS*GD*IF*GYRSG------FVRTVVAILSW*AWQ*YIREKTI 469
++ S R+G S I R VR V++IL + Y++++ I
Sbjct: 63 AVSRQEYSIKSSEREGSNSKSSRIDGIGREEPAIDEVAVRAVISILGGYIGR-YLKDE-I 120
Query: 470 FAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVENQ 601
F + R K+ C ++ + + N I ANLELG+E I +LVE +
Sbjct: 121 FRESVREKFNSCLERRKRKEPDNG-ILANLELGVESIDKLVEGK 163
>ref|XP_006468438.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like isoform X4
[Citrus sinensis]
Length = 925
Score = 65.5 bits (158), Expect = 1e-08
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Frame = +2
Query: 149 SLLELLSKEGFD-GCKRFIRS*KKVKVRDWSSLD*-LIALPIFICDDRRRFTSQKNNSDK 322
SL +LL++EGF+ G ++F K +K++D +S D IALPI+IC D + F K SDK
Sbjct: 3 SLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQGSDK 62
Query: 323 -----PSTMNGSSRKGRQS*GD*IF*GYRSG------FVRTVVAILSW*AWQ*YIREKTI 469
++ S R+G S I R VR V++IL + Y++++ I
Sbjct: 63 AVSRQEYSIKSSEREGSNSKSSRIDGIGREEPAIDEVAVRAVISILGGYIGR-YLKDE-I 120
Query: 470 FAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVENQ 601
F + R K+ C ++ + + N I ANLELG+E I +LVE +
Sbjct: 121 FRESVREKFNSCLERRKRKEPDNG-ILANLELGVESIDKLVEGK 163
>ref|XP_006468437.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like isoform X3
[Citrus sinensis]
Length = 939
Score = 65.5 bits (158), Expect = 1e-08
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Frame = +2
Query: 149 SLLELLSKEGFD-GCKRFIRS*KKVKVRDWSSLD*-LIALPIFICDDRRRFTSQKNNSDK 322
SL +LL++EGF+ G ++F K +K++D +S D IALPI+IC D + F K SDK
Sbjct: 3 SLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQGSDK 62
Query: 323 -----PSTMNGSSRKGRQS*GD*IF*GYRSG------FVRTVVAILSW*AWQ*YIREKTI 469
++ S R+G S I R VR V++IL + Y++++ I
Sbjct: 63 AVSRQEYSIKSSEREGSNSKSSRIDGIGREEPAIDEVAVRAVISILGGYIGR-YLKDE-I 120
Query: 470 FAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVENQ 601
F + R K+ C ++ + + N I ANLELG+E I +LVE +
Sbjct: 121 FRESVREKFNSCLERRKRKEPDNG-ILANLELGVESIDKLVEGK 163
>ref|XP_006468435.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like isoform X1
[Citrus sinensis] gi|568828208|ref|XP_006468436.1|
PREDICTED: putative E3 ubiquitin-protein ligase LIN-like
isoform X2 [Citrus sinensis]
Length = 940
Score = 65.5 bits (158), Expect = 1e-08
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Frame = +2
Query: 149 SLLELLSKEGFD-GCKRFIRS*KKVKVRDWSSLD*-LIALPIFICDDRRRFTSQKNNSDK 322
SL +LL++EGF+ G ++F K +K++D +S D IALPI+IC D + F K SDK
Sbjct: 3 SLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQGSDK 62
Query: 323 -----PSTMNGSSRKGRQS*GD*IF*GYRSG------FVRTVVAILSW*AWQ*YIREKTI 469
++ S R+G S I R VR V++IL + Y++++ I
Sbjct: 63 AVSRQEYSIKSSEREGSNSKSSRIDGIGREEPAIDEVAVRAVISILGGYIGR-YLKDE-I 120
Query: 470 FAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVENQ 601
F + R K+ C ++ + + N I ANLELG+E I +LVE +
Sbjct: 121 FRESVREKFNSCLERRKRKEPDNG-ILANLELGVESIDKLVEGK 163
>ref|XP_006448745.1| hypothetical protein CICLE_v10014170mg [Citrus clementina]
gi|557551356|gb|ESR61985.1| hypothetical protein
CICLE_v10014170mg [Citrus clementina]
Length = 954
Score = 64.3 bits (155), Expect = 2e-08
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 13/164 (7%)
Frame = +2
Query: 149 SLLELLSKEGFD-GCKRFIRS*KKVKVRDWSSLD*-LIALPIFICDDRRRFTSQKNNSDK 322
SL +LL++EGF+ G ++F K +K++D +S D IALPI+IC D + F K SDK
Sbjct: 3 SLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQRSDK 62
Query: 323 -----PSTMNGSSRKGRQS*GD*IF*GYRSG------FVRTVVAILSW*AWQ*YIREKTI 469
++ S R+G S I R VR V++IL + Y+++ I
Sbjct: 63 AVSRQEYSIKSSEREGSNSKSSRIDGIGREEPAIDEVAVRAVISILGGYIGR-YLKD-GI 120
Query: 470 FAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVENQ 601
F + R K+ C ++ + + N I ANLELG+E I +LVE +
Sbjct: 121 FRESVREKFNSCLERRKRKEPDNG-ILANLELGVESIDKLVEGK 163
>ref|XP_006448744.1| hypothetical protein CICLE_v10014170mg [Citrus clementina]
gi|557551355|gb|ESR61984.1| hypothetical protein
CICLE_v10014170mg [Citrus clementina]
Length = 932
Score = 64.3 bits (155), Expect = 2e-08
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 13/164 (7%)
Frame = +2
Query: 149 SLLELLSKEGFD-GCKRFIRS*KKVKVRDWSSLD*-LIALPIFICDDRRRFTSQKNNSDK 322
SL +LL++EGF+ G ++F K +K++D +S D IALPI+IC D + F K SDK
Sbjct: 3 SLQQLLAEEGFERGHRQFTEGPKPMKLKDRTSTDHDSIALPIYICHDLKSFDFSKQRSDK 62
Query: 323 -----PSTMNGSSRKGRQS*GD*IF*GYRSG------FVRTVVAILSW*AWQ*YIREKTI 469
++ S R+G S I R VR V++IL + Y+++ I
Sbjct: 63 AVSRQEYSIKSSEREGSNSKSSRIDGIGREEPAIDEVAVRAVISILGGYIGR-YLKD-GI 120
Query: 470 FAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVENQ 601
F + R K+ C ++ + + N I ANLELG+E I +LVE +
Sbjct: 121 FRESVREKFNSCLERRKRKEPDNG-ILANLELGVESIDKLVEGK 163
>gb|EMJ14889.1| hypothetical protein PRUPE_ppa000859mg [Prunus persica]
Length = 980
Score = 62.8 bits (151), Expect = 7e-08
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 13/164 (7%)
Frame = +2
Query: 149 SLLELLSKEGFDGCKRFIRS*KKVKVRDWSSLD*LIAL-PIFICDDRRRFTSQKNNSDKP 325
SL ELL+ E + K++ +S K VK R+ + D IAL PI+IC R+ + + + KP
Sbjct: 3 SLQELLTDERLELGKKYPKSPKPVKHRERVAPDESIALLPIYICHGRKSYDFSNHEAQKP 62
Query: 326 STMNGSSRK-----GRQS*GD*IF*GYRSG-------FVRTVVAILSW*AWQ*YIREKTI 469
+ GSSR+ R + + R+ R V++ILS A + YI+++
Sbjct: 63 AMRKGSSRRVSSTSERSNSKSLVSESSRTNEPAIDEVATRAVISILSGCAGR-YIKDEA- 120
Query: 470 FAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVENQ 601
F + K C ++K + + ++EI+ANLELGIE I +LVE+Q
Sbjct: 121 FRETIWEKCSCCLVRKKKDE--DNEIFANLELGIESINKLVEDQ 162
>ref|XP_002332131.1| predicted protein [Populus trichocarpa]
Length = 980
Score = 62.4 bits (150), Expect = 9e-08
Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 11/162 (6%)
Frame = +2
Query: 149 SLLELLSKEGFDGCKRFIRS*KKVKVRDWSSLD*LIALPIFICDDRRRFTSQKNNSDKPS 328
SL ++LS+EGF+ ++F+RS ++ + S + LPI IC D++RF S K +D S
Sbjct: 3 SLHQMLSEEGFEH-RKFLRSRDRLTRPEES-----VILPIHICHDQKRFQSPKQKTDMGS 56
Query: 329 TMNGSSRKGRQS*GD-------*IF*GYRSGF----VRTVVAILSW*AWQ*YIREKTIFA 475
T GSS R+ D + G +R VV+ILS + YI++ + F
Sbjct: 57 TRKGSSISSRRVSSDTERLQSKSLLKGEEPAIDVIAIRAVVSILSGYIGR-YIKDVS-FR 114
Query: 476 KPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVENQ 601
+ R K C ++++ + S+D I+ N+E+G+E I++LVE +
Sbjct: 115 EVIREKCNSCLVRRS--KGSDDGIFVNMEVGMESIEKLVEEK 154
>ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
sativus] gi|449527759|ref|XP_004170877.1| PREDICTED:
putative E3 ubiquitin-protein ligase LIN-like [Cucumis
sativus]
Length = 863
Score = 61.2 bits (147), Expect = 2e-07
Identities = 53/169 (31%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Frame = +2
Query: 149 SLLELLSKEGFDGCKR-FIRS*KKVKVRDWSSLD*LIALPIFICDDRRRFTSQKNNSDKP 325
SL ELL++EGF+G R + K R ++ D + LPI+IC D++ S K DKP
Sbjct: 3 SLQELLTREGFEGSNYPSTRKLSRPKGRSRTAPDDSVTLPIYICHDKKTIDSSKKKHDKP 62
Query: 326 STMNGSSRKGRQS*GD*IF*GYRSGFV-------------------RTVVAILSW*AWQ* 448
NGSS ++ R G V R VV+ILS +
Sbjct: 63 LVRNGSS----------VYSSKRVGSVSETLPCKSMEEPAIDEIAIRAVVSILSGYVGR- 111
Query: 449 YIREKTIFAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVE 595
Y +++ F + R K PC ++K + + I +NLE+G++ + RLVE
Sbjct: 112 YSKDEN-FREIVRKKCNPCLIRKGEME---SGICSNLEMGMKSVDRLVE 156
>ref|XP_006376995.1| hypothetical protein POPTR_0012s11910g [Populus trichocarpa]
gi|550326930|gb|ERP54792.1| hypothetical protein
POPTR_0012s11910g [Populus trichocarpa]
Length = 980
Score = 60.8 bits (146), Expect = 3e-07
Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 11/162 (6%)
Frame = +2
Query: 149 SLLELLSKEGFDGCKRFIRS*KKVKVRDWSSLD*LIALPIFICDDRRRFTSQKNNSDKPS 328
SL ++LS+EGF+ ++F+R+ ++ + S + LPI IC D++RF S K +D S
Sbjct: 3 SLHQMLSEEGFEH-RKFLRNRDRLTRPEES-----VILPIHICHDQKRFQSPKQKTDMGS 56
Query: 329 TMNGSSRKGRQS*GD-------*IF*GYRSGF----VRTVVAILSW*AWQ*YIREKTIFA 475
T GSS R+ D + G +R VV+ILS + YI++ + F
Sbjct: 57 TRKGSSISSRRVSSDTERLQSKSLLKGEEPAIDVIAIRAVVSILSGYIAR-YIKDVS-FR 114
Query: 476 KPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLVENQ 601
+ R K C ++++ + S+D I+ N+E+G+E I++LVE +
Sbjct: 115 EVIREKCNSCLVRRS--KGSDDGIFVNMEVGMESIEKLVEEK 154
>emb|CAN67079.1| hypothetical protein VITISV_004500 [Vitis vinifera]
Length = 1049
Score = 60.8 bits (146), Expect = 3e-07
Identities = 59/172 (34%), Positives = 90/172 (52%), Gaps = 24/172 (13%)
Frame = +2
Query: 149 SLLELLSKEGFDGCKRFIRS*KKVKV-----RDWS-SLD*LIALPIFICDDRRRFTSQKN 310
SL +LL +EGF+ K ++ +K + RD + D IALPI+IC DRR F S K+
Sbjct: 3 SLHDLLVEEGFERTKNHPKTSRKPPLLSKPNRDPRLARDDSIALPIYICHDRRNFHSVKH 62
Query: 311 NSDKPSTMNG------------SSRKGRQS*GD*IF*GYRSG------FVRTVVAILSW* 436
+DK T N S R QS G R G +R V++ILS
Sbjct: 63 KADKAITRNAPGLLSSKRVSSDSERANSQSLGG-SEGARRDGPAIDEVAIRAVISILSGY 121
Query: 437 AWQ*YIREKTIFAKPTRAKYYPCFMKKNQYQYSNDEIYANLELGIEIIKRLV 592
+ Y++++T F + R K Y C +++ + S++ ++AN+ELGIE I++LV
Sbjct: 122 IGR-YLKDET-FRESVREKCYACL--ESRKKDSDNGVFANMELGIESIEQLV 169