BLASTX nr result
ID: Rauwolfia21_contig00040203
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00040203 (334 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001268193.1| promoter-binding protein SPL10 [Vitis vinife... 74 2e-11 emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera] 66 5e-09 ref|XP_006372253.1| hypothetical protein POPTR_0018s14680g [Popu... 60 4e-07 emb|CBI24049.3| unnamed protein product [Vitis vinifera] 56 6e-06 >ref|NP_001268193.1| promoter-binding protein SPL10 [Vitis vinifera] gi|295815792|gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera] Length = 500 Score = 74.3 bits (181), Expect = 2e-11 Identities = 49/133 (36%), Positives = 66/133 (49%), Gaps = 28/133 (21%) Frame = +1 Query: 1 CSLKMADLGSSLVSP--SAYTDKKEDLP-------------------------PQHLNLG 99 CS K G SL+ P + DK+ LP P+ LN G Sbjct: 292 CSFKDTQTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHVNSERMLSFDGSTPRVLNQG 351 Query: 100 KDASVPVSGINKSPATPRALSLLSTSSWGLNEPEPHSLEQILQ-RTITMPQPVLKLEPQN 276 +AS S N +P RALSLLST+SWGLN+P P SL+Q++ +M QP + +EP N Sbjct: 352 LEASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQSSMAQPTMHVEPHN 411 Query: 277 WQRISSEHVSKEQ 315 W SSE++ +Q Sbjct: 412 WALASSENMHVQQ 424 >emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera] Length = 1048 Score = 65.9 bits (159), Expect = 5e-09 Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%) Frame = +1 Query: 76 PPQHLNLGKDASVPVSGINKSPATPRALSLLSTSSWGLNEPEPHSLEQILQ-RTITMPQP 252 PP+ L +AS S N +P RALSLLST+SWGLN+P P SL+Q++ +M QP Sbjct: 931 PPKSL----EASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQXSMAQP 986 Query: 253 VLKLEPQNWQRISSEHVSKEQ 315 EP NW SSE++ +Q Sbjct: 987 TXHAEPHNWALASSENMHVQQ 1007 >ref|XP_006372253.1| hypothetical protein POPTR_0018s14680g [Populus trichocarpa] gi|566215919|ref|XP_006372254.1| hypothetical protein POPTR_0018s14680g [Populus trichocarpa] gi|566215921|ref|XP_006372255.1| hypothetical protein POPTR_0018s14680g [Populus trichocarpa] gi|550318784|gb|ERP50050.1| hypothetical protein POPTR_0018s14680g [Populus trichocarpa] gi|550318785|gb|ERP50051.1| hypothetical protein POPTR_0018s14680g [Populus trichocarpa] gi|550318786|gb|ERP50052.1| hypothetical protein POPTR_0018s14680g [Populus trichocarpa] Length = 472 Score = 59.7 bits (143), Expect = 4e-07 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Frame = +1 Query: 10 KMADLGSSLVSPSAYTDKKEDLPPQHLNLGKDASVPVSGINKSPATPRALSLLSTSSWGL 189 ++ D S++ + S E PQ + G + S S I +P RALSLLST+SWG Sbjct: 329 EVPDAASTIPTDSDKIISFERSTPQVFSQGFEGSALTSNIEVAPDLRRALSLLSTTSWGS 388 Query: 190 NEPEPHSLEQI-LQRTITMPQPVLKLEPQNWQRISSEHVSKEQAA 321 NE SL+Q+ L +M QP++ E QN SSE+ EQA+ Sbjct: 389 NEHGSTSLDQLMLANQTSMTQPMINAELQNCPVASSENARMEQAS 433 >emb|CBI24049.3| unnamed protein product [Vitis vinifera] Length = 326 Score = 55.8 bits (133), Expect = 6e-06 Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 27/102 (26%) Frame = +1 Query: 1 CSLKMADLGSSLVSP--SAYTDKKEDLP-------------------------PQHLNLG 99 CS K G SL+ P + DK+ LP P+ LN G Sbjct: 169 CSFKDTQTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHGNSERMLSFDGSTPRVLNQG 228 Query: 100 KDASVPVSGINKSPATPRALSLLSTSSWGLNEPEPHSLEQIL 225 +AS S N +P RALSLLST+SWGLN+P P SL+Q++ Sbjct: 229 LEASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLM 270