BLASTX nr result

ID: Rauwolfia21_contig00040203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00040203
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001268193.1| promoter-binding protein SPL10 [Vitis vinife...    74   2e-11
emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera]    66   5e-09
ref|XP_006372253.1| hypothetical protein POPTR_0018s14680g [Popu...    60   4e-07
emb|CBI24049.3| unnamed protein product [Vitis vinifera]               56   6e-06

>ref|NP_001268193.1| promoter-binding protein SPL10 [Vitis vinifera]
           gi|295815792|gb|ADG36381.1| promoter-binding protein
           SPL10 [Vitis vinifera]
          Length = 500

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 49/133 (36%), Positives = 66/133 (49%), Gaps = 28/133 (21%)
 Frame = +1

Query: 1   CSLKMADLGSSLVSP--SAYTDKKEDLP-------------------------PQHLNLG 99
           CS K    G SL+ P  +   DK+  LP                         P+ LN G
Sbjct: 292 CSFKDTQTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHVNSERMLSFDGSTPRVLNQG 351

Query: 100 KDASVPVSGINKSPATPRALSLLSTSSWGLNEPEPHSLEQILQ-RTITMPQPVLKLEPQN 276
            +AS   S  N +P   RALSLLST+SWGLN+P P SL+Q++     +M QP + +EP N
Sbjct: 352 LEASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQSSMAQPTMHVEPHN 411

Query: 277 WQRISSEHVSKEQ 315
           W   SSE++  +Q
Sbjct: 412 WALASSENMHVQQ 424


>emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera]
          Length = 1048

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +1

Query: 76   PPQHLNLGKDASVPVSGINKSPATPRALSLLSTSSWGLNEPEPHSLEQILQ-RTITMPQP 252
            PP+ L    +AS   S  N +P   RALSLLST+SWGLN+P P SL+Q++     +M QP
Sbjct: 931  PPKSL----EASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQXSMAQP 986

Query: 253  VLKLEPQNWQRISSEHVSKEQ 315
                EP NW   SSE++  +Q
Sbjct: 987  TXHAEPHNWALASSENMHVQQ 1007


>ref|XP_006372253.1| hypothetical protein POPTR_0018s14680g [Populus trichocarpa]
           gi|566215919|ref|XP_006372254.1| hypothetical protein
           POPTR_0018s14680g [Populus trichocarpa]
           gi|566215921|ref|XP_006372255.1| hypothetical protein
           POPTR_0018s14680g [Populus trichocarpa]
           gi|550318784|gb|ERP50050.1| hypothetical protein
           POPTR_0018s14680g [Populus trichocarpa]
           gi|550318785|gb|ERP50051.1| hypothetical protein
           POPTR_0018s14680g [Populus trichocarpa]
           gi|550318786|gb|ERP50052.1| hypothetical protein
           POPTR_0018s14680g [Populus trichocarpa]
          Length = 472

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +1

Query: 10  KMADLGSSLVSPSAYTDKKEDLPPQHLNLGKDASVPVSGINKSPATPRALSLLSTSSWGL 189
           ++ D  S++ + S      E   PQ  + G + S   S I  +P   RALSLLST+SWG 
Sbjct: 329 EVPDAASTIPTDSDKIISFERSTPQVFSQGFEGSALTSNIEVAPDLRRALSLLSTTSWGS 388

Query: 190 NEPEPHSLEQI-LQRTITMPQPVLKLEPQNWQRISSEHVSKEQAA 321
           NE    SL+Q+ L    +M QP++  E QN    SSE+   EQA+
Sbjct: 389 NEHGSTSLDQLMLANQTSMTQPMINAELQNCPVASSENARMEQAS 433


>emb|CBI24049.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 27/102 (26%)
 Frame = +1

Query: 1   CSLKMADLGSSLVSP--SAYTDKKEDLP-------------------------PQHLNLG 99
           CS K    G SL+ P  +   DK+  LP                         P+ LN G
Sbjct: 169 CSFKDTQTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHGNSERMLSFDGSTPRVLNQG 228

Query: 100 KDASVPVSGINKSPATPRALSLLSTSSWGLNEPEPHSLEQIL 225
            +AS   S  N +P   RALSLLST+SWGLN+P P SL+Q++
Sbjct: 229 LEASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLM 270


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