BLASTX nr result

ID: Rauwolfia21_contig00040138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00040138
         (635 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234622.1| plant resistance protein [Solanum lycopersic...    56   8e-06
gb|AAC32253.1| disease resistance gene homolog Mi-copy1 [Solanum...    56   8e-06

>ref|NP_001234622.1| plant resistance protein [Solanum lycopersicum]
           gi|3449378|gb|AAC67237.1| plant resistance protein
           [Solanum lycopersicum]
          Length = 1255

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
 Frame = +2

Query: 146 LKVYLLCLTNWKKSSFGRDKNYGFLQE--------SHIEKTLEEAERKIKESGFEGCNAV 301
           ++  LL L++  K     DK +  L          S + + LEE  R   + G    N  
Sbjct: 295 MEFLLLILSDMPKDFIHHDKLFDLLDRVGVLTREVSTLVRDLEEEPRN--KEGNNQTNCA 352

Query: 302 ASELLQNIKLCKPKIEEDCLNFLDCSMQCYFSLDEVPEFMRSISASLNNLLHSKVDMMLD 481
             +LL+NI+L K  ++   L  LD S QC F + + P FM  +   LN+LL S    +  
Sbjct: 353 TLDLLENIELLKKDLKHVYLKALDSS-QCCFPMSDGPLFMHLLHIHLNDLLDSNAYSIAL 411

Query: 482 VKVEIESLEHNLEFFKELF 538
           +K EIE ++ +L+F +  F
Sbjct: 412 IKEEIELVKQDLKFIRSFF 430


>gb|AAC32253.1| disease resistance gene homolog Mi-copy1 [Solanum lycopersicum]
          Length = 1204

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
 Frame = +2

Query: 146 LKVYLLCLTNWKKSSFGRDKNYGFLQE--------SHIEKTLEEAERKIKESGFEGCNAV 301
           ++  LL L++  K     DK +  L          S + + LEE  R   + G    N  
Sbjct: 244 MEFLLLILSDMPKDFIHHDKLFDLLDRVGVLTREVSTLVRDLEEEPRN--KEGNNQTNCA 301

Query: 302 ASELLQNIKLCKPKIEEDCLNFLDCSMQCYFSLDEVPEFMRSISASLNNLLHSKVDMMLD 481
             +LL+NI+L K  ++   L  LD S QC F + + P FM  +   LN+LL S    +  
Sbjct: 302 TLDLLENIELLKKDLKHVYLKALDSS-QCCFPMSDGPLFMHLLHIHLNDLLDSNAYSIAL 360

Query: 482 VKVEIESLEHNLEFFKELF 538
           +K EIE ++ +L+F +  F
Sbjct: 361 IKEEIELVKQDLKFIRSFF 379


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