BLASTX nr result
ID: Rauwolfia21_contig00040041
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00040041
(269 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY19564.1| Uncharacterized protein TCM_044707 [Theobroma cacao] 82 1e-13
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 76 4e-12
emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera] 74 2e-11
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 74 3e-11
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 72 6e-11
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 71 1e-10
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 70 4e-10
emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera] 69 8e-10
emb|CAN79826.1| hypothetical protein VITISV_006524 [Vitis vinifera] 69 8e-10
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 68 1e-09
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 68 1e-09
ref|XP_006367809.1| PREDICTED: uncharacterized protein LOC102582... 67 2e-09
dbj|BAF00495.1| hypothetical protein [Arabidopsis thaliana] 66 4e-09
gb|AAK44121.1|AF370306_1 putative retroelement pol polyprotein [... 66 6e-09
dbj|BAD43492.1| putative retroelement pol polyprotein [Arabidops... 65 7e-09
emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera] 65 9e-09
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 65 1e-08
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] 64 2e-08
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 64 3e-08
dbj|BAF00669.1| retrotransposon like protein [Arabidopsis thaliana] 63 4e-08
>gb|EOY19564.1| Uncharacterized protein TCM_044707 [Theobroma cacao]
Length = 346
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISDARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIG 180
RF+++ Q +EIPQALA LS +D DP + D GA+ HMTN+S + +K Y+G D I +G
Sbjct: 149 RFDYSYQFEEIPQALATLSTNDQNDPSFYVDFGATSHMTNDSSKLSYIKPYNGNDVIYVG 208
Query: 181 DGKSLSISHAGDASINTEIGPLNLKNVLL 267
DG I + +INTE G LNLK+VL+
Sbjct: 209 DGNIFPIC---EVNINTENGQLNLKDVLV 234
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISDARDP---QWIPDTGASCHMTNNSGIFTVLKSYDGKDQI 171
RF+++ Q +++P ALA + I+D D +WIPD+ AS H+TNN + + Y G D I
Sbjct: 296 RFDNSYQHEDLPMALATMRITDVTDHHGHEWIPDSAASAHVTNNRHVLQQSQPYHGSDSI 355
Query: 172 VIGDGKSLSISHAGDASINTEIGPLNLKNVLL 267
++ DG L I+H G SI + G + LK VL+
Sbjct: 356 MVADGNFLPITHTGSGSIASSSGKIPLKEVLV 387
>emb|CAN60203.1| hypothetical protein VITISV_036059 [Vitis vinifera]
Length = 1412
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 19 QPKEIPQALAALSISDA-RDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIGDGKSL 195
Q +IPQALAAL++ + + +W DTGAS HMT G+ T +++Y G D ++IGDG SL
Sbjct: 324 QQDDIPQALAALTLDNTIAETEWTSDTGASNHMTGKQGMLTNIRNYSGSDSVLIGDGSSL 383
Query: 196 SISHAGDASINTEIGPLNLKNVLL 267
I GD+SI L L +VLL
Sbjct: 384 PILGIGDSSIKQRNKVLPLHDVLL 407
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/89 (34%), Positives = 55/89 (61%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISDARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIG 180
RF+H Q + QA ++L +SD+ +W+PD+ A+ H+T+++ Y+G D +++G
Sbjct: 298 RFDHNYQSVDTAQAFSSLRVSDSSGKEWVPDSAATAHVTSSTNNLQAASPYNGSDTVLVG 357
Query: 181 DGKSLSISHAGDASINTEIGPLNLKNVLL 267
DG L I+H G +I+++ G L L VL+
Sbjct: 358 DGAYLPITHVGSTTISSDSGTLPLNEVLV 386
>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
putative protein [Arabidopsis thaliana]
Length = 1415
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/89 (34%), Positives = 56/89 (62%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISDARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIG 180
RF+HA Q ++ +A AA+ +SD + W+ D+GA+ H+TN++ + Y G+D +++G
Sbjct: 266 RFDHAFQSEDFSKAFAAMRVSDQKSNPWVTDSGATSHITNSTSQLQSAQPYSGEDSVIVG 325
Query: 181 DGKSLSISHAGDASINTEIGPLNLKNVLL 267
+ L I+H G A + + G L L++VL+
Sbjct: 326 NSDFLPITHIGSAVLTSNQGNLPLRDVLV 354
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISD---ARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQI 171
RF+++ Q E+ ALAA+ +SD +R +W PDTGAS H+TN + Y G D +
Sbjct: 301 RFDNSYQLDEMHNALAAMRVSDMIDSRGGEWFPDTGASAHITNTPHHLQNAQPYMGSDSV 360
Query: 172 VIGDGKSLSISHAGDASINTEIGPLNLKNVLL 267
++G+G+ L I+H G ASI + G L L +VL+
Sbjct: 361 MVGNGEYLPITHTGAASIASSSGNLILNDVLV 392
>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISDARDP---QWIPDTGASCHMTNNSGIFTVLKSYDGKDQI 171
RFN++ Q +E+P+ALAA+ I+D D +W+PD+ A+ H+TN+ + Y G D +
Sbjct: 302 RFNNSYQYEELPRALAAMRITDITDQHGNEWLPDSAATAHVTNSPRSLQQSQPYHGSDAV 361
Query: 172 VIGDGKSLSISHAGDASINTEIGPLNLKNVLL 267
++ DG L I+H G ++ + G + L +VL+
Sbjct: 362 MVADGNFLPITHTGSTNLASSSGNVPLTDVLV 393
>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
Length = 1556
Score = 68.6 bits (166), Expect = 8e-10
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 19 QPKEIPQALAALSISDA-RDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIGDGKSL 195
Q +IPQALA L++ + +W +TGAS HMT G+ T +++Y G D +IGDG SL
Sbjct: 584 QQDDIPQALAXLTLDNTIAXMEWTSBTGASNHMTGKQGMLTNIRNYSGSDSXLIGDGSSL 643
Query: 196 SISHAGDASINTEIGPLNLKNVLL 267
I GD+SI + L L +VLL
Sbjct: 644 PILGIGDSSIKQKNKVLPLHDVLL 667
>emb|CAN79826.1| hypothetical protein VITISV_006524 [Vitis vinifera]
Length = 399
Score = 68.6 bits (166), Expect = 8e-10
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 19 QPKEIPQALAALSISDA-RDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIGDGKSL 195
Q +IPQALAAL++++ + +W DTGAS HM G+ T +++Y G ++IGDG SL
Sbjct: 208 QQDDIPQALAALTLNNTIAETEWTSDTGASNHMIGKQGMLTNIRNYSGSYSVLIGDGSSL 267
Query: 196 SISHAGDASINTEIGPLNLKNVLL 267
I GD+SI + L L ++LL
Sbjct: 268 PILGIGDSSIKQKNKVLPLHDILL 291
>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
Length = 1392
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISD---ARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQI 171
RF P+++P A AA+ +SD A +W+PD+ A+ H+TN + ++Y G D +
Sbjct: 297 RFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSV 356
Query: 172 VIGDGKSLSISHAGDASINTEIGPLNLKNVLL 267
++G+G L I+H G +N G L L++VL+
Sbjct: 357 IVGNGDFLPITHIGTIPLNISQGTLPLEDVLV 388
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISD---ARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQI 171
RF P+++P A AA+ +SD A +W+PD+ A+ H+TN + ++Y G D +
Sbjct: 294 RFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSV 353
Query: 172 VIGDGKSLSISHAGDASINTEIGPLNLKNVLL 267
++G+G L I+H G +N G L L++VL+
Sbjct: 354 IVGNGDFLPITHIGTIPLNISQGTLPLEDVLV 385
>ref|XP_006367809.1| PREDICTED: uncharacterized protein LOC102582397, partial [Solanum
tuberosum]
Length = 794
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +1
Query: 28 EIPQALAALSISDARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIGDGKSLSISH 207
E+PQ LA+ ++ + D D+GAS HMT+NSGI T LK Y+G D+I+IG+G L I+H
Sbjct: 568 ELPQTLASTNLQNTTDDTLYVDSGASSHMTHNSGILTDLKHYNGPDKIIIGNGSKLDITH 627
Query: 208 AGDASINTEIGPLNLKNVL 264
N L LK VL
Sbjct: 628 VR----NISGSGLKLKEVL 642
>dbj|BAF00495.1| hypothetical protein [Arabidopsis thaliana]
Length = 271
Score = 66.2 bits (160), Expect = 4e-09
Identities = 27/80 (33%), Positives = 49/80 (61%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISDARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIG 180
RF+HA Q ++ +A AA+ +SD + W+ D+GA+ H+TN++ + Y G+D +++G
Sbjct: 179 RFDHAFQSEDFSKAFAAMRVSDQKSNPWVTDSGATSHITNSTSQLQSAQPYSGEDSVIVG 238
Query: 181 DGKSLSISHAGDASINTEIG 240
+ L I+H G A + + G
Sbjct: 239 NSDFLPITHIGSAVLTSNQG 258
>gb|AAK44121.1|AF370306_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|17104755|gb|AAL34266.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|51971701|dbj|BAD44515.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|51971723|dbj|BAD44526.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
gi|110741320|dbj|BAF02210.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 405
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISDARDP---QWIPDTGASCHMTNNSGIFTVLKSYDGKDQI 171
RFN++ Q +E+P+ALAA+ I+D D +W+PD+ A+ H+TN+ + Y G D +
Sbjct: 312 RFNNSYQYEELPRALAAMRITDITDQHGNEWLPDSAATAHVTNSPRSLQQSQPYHGSDAV 371
Query: 172 VIGDGKSLSISHAGDASINTEIG 240
++ DG L I+H G ++ + G
Sbjct: 372 MVADGNFLPITHTGSTNLASSSG 394
>dbj|BAD43492.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 207
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISDARDP---QWIPDTGASCHMTNNSGIFTVLKSYDGKDQI 171
RFN++ Q +E+P+ALAA+ I+D D +W+PD+ A+ H+TN+ + Y G D +
Sbjct: 114 RFNNSYQYEELPRALAAMRITDITDQHGNEWLPDSAATAHVTNSPRSLQQSQPYHGSDAV 173
Query: 172 VIGDGKSLSISHAGDASINTEIG 240
+ DG L I+H G ++ + G
Sbjct: 174 TVADGNFLPITHTGSTNLASSSG 196
>emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera]
Length = 430
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +1
Query: 19 QPKEIPQALAALSISDARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIGDGKSLS 198
Q + +A + SI D D +W PD+GA+ HMT+++ Y G +++++G+G+SL+
Sbjct: 282 QSANLAEAFSTCSIQDFNDSEWFPDSGATSHMTSDTEGVNQPAVYYGNERVMVGNGQSLA 341
Query: 199 ISHAGDASINTEIGPLNLKNVLL 267
ISH G S PL L NVL+
Sbjct: 342 ISHTGSISSLVPSSPLLLSNVLV 364
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/89 (33%), Positives = 52/89 (58%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISDARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIG 180
RF++ Q + QA +AL +SD +W PD+ A+ H+T ++ +Y+G D +++G
Sbjct: 297 RFDNNYQSEVPTQAFSALRVSDETGKEWYPDSAATAHITASTSGLQNATTYEGNDAVLVG 356
Query: 181 DGKSLSISHAGDASINTEIGPLNLKNVLL 267
DG L I+H G +I++ G + L VL+
Sbjct: 357 DGTYLPITHVGSTTISSSKGTIPLNEVLV 385
>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
Length = 1361
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +1
Query: 19 QPKEIPQALAALSISDARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQIVIGDGKSLS 198
Q + +A +A SI D D +W PD+GA+ HMT+++ Y G +++++G+G+SL+
Sbjct: 412 QSANLAEAFSAYSIQDFNDSEWFPDSGATSHMTSDTEGVNQPDVYSGNERVMVGNGQSLA 471
Query: 199 ISHAGDASINTEIGPLNLKN 258
ISH G S PL L N
Sbjct: 472 ISHTGSISSLIPSSPLLLSN 491
>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 RFNHACQPKEIPQA-LAALSISDARDPQ-WIPDTGASCHMTNNSGIFTVLKSYDGKDQIV 174
RF+ + Q E A +AL I+D D W+PD+ A+ H+TNNS ++ Y G D ++
Sbjct: 285 RFDDSYQHSEAAAAAFSALHITDVSDDSGWVPDSAATAHITNNSSRLQQMQPYLGNDTVM 344
Query: 175 IGDGKSLSISHAGDASINTEIGPLNLKNVLL 267
DG L I+H G A++ + G L LK+VL+
Sbjct: 345 ASDGNFLPITHIGSANLPSTSGNLPLKDVLV 375
>dbj|BAF00669.1| retrotransposon like protein [Arabidopsis thaliana]
Length = 392
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 RFNHACQPKEIPQALAALSISD---ARDPQWIPDTGASCHMTNNSGIFTVLKSYDGKDQI 171
RF P+++P A AA+ +SD A +W+PD+ A+ H+TN + ++Y G D +
Sbjct: 297 RFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSV 356
Query: 172 VIGDGKSLSISHAGDASINTEIGPLN 249
++G+G L I+H G +N G N
Sbjct: 357 IVGNGDFLPITHIGTIPLNISQGQTN 382