BLASTX nr result
ID: Rauwolfia21_contig00040002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00040002
(286 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 77 3e-12
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 73 3e-11
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 72 8e-11
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 71 1e-10
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 68 1e-09
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t... 68 1e-09
gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [... 67 2e-09
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 67 2e-09
gb|EMJ01337.1| hypothetical protein PRUPE_ppa017266mg, partial [... 67 3e-09
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas... 67 3e-09
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 66 4e-09
ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein A... 66 5e-09
ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302... 65 9e-09
ref|XP_004293032.1| PREDICTED: uncharacterized protein LOC101314... 64 2e-08
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 64 2e-08
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 64 3e-08
ref|XP_002520283.1| conserved hypothetical protein [Ricinus comm... 63 4e-08
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S... 63 5e-08
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 62 6e-08
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera] 62 8e-08
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 76.6 bits (187), Expect = 3e-12
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
IHG K +R P IS+L+FADD +F RAT +E + I +ILN + A GQ IN +KS + F
Sbjct: 671 IHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSF 730
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+ V K EL +L M + + +KY+G P
Sbjct: 731 SRGVSCEKKEELITLLHMRQVDRHQKYLGIP 761
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 73.2 bits (178), Expect = 3e-11
Identities = 42/91 (46%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
+HG K +R P IS+L FAD +F RA+ +E I ILN + A GQ IN DKS + F
Sbjct: 668 LHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEILNLYEQASGQKINYDKSEVSF 727
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
SK V K EL +IL M + E KY+G P
Sbjct: 728 SKGVSIAQKEELSNILQMKQVERHMKYLGIP 758
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNFAL--GQSINLDKSVIRF 179
+HG K +R P IS+L FADD +F RA +E I +ILN + L GQ IN +KS + +
Sbjct: 668 LHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVSY 727
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+ V K EL +IL M + + KY+G P
Sbjct: 728 SRGVSVSQKDELTNILNMRQVDRHEKYLGIP 758
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
+HG K +R P IS+L+FA D +FC+AT+EE + + N+L + A GQ++N KS I F
Sbjct: 119 LHGFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILF 178
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
K +D +L +L + + E +Y+G P
Sbjct: 179 GKGLDFRTSEQLSQLLGIYKTEGFGRYLGLP 209
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/91 (36%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
IHG +I R P +S+L FADD +F +A+V+E + +I++ + A GQ +NL K+ + F
Sbjct: 667 IHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVF 726
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S++VD+ + + ++L + E + + KY+G P
Sbjct: 727 SRSVDRERRSAIVNVLGVKEVDRQEKYLGLP 757
>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
Length = 405
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
IHGVK+ R P +S+L+FAD+ +FCRA V EA + IL + A GQ INL KS + F
Sbjct: 52 IHGVKVCRGAPVVSHLLFADNCFLFCRANVVEAQRLLTILKTYEAASGQEINLSKSEVFF 111
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+N+ + +L I+ + KY+G P
Sbjct: 112 SRNMSGAAQEDLSRIIGVRHVMGTGKYLGLP 142
>gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [Prunus persica]
Length = 949
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNFA--LGQSINLDKSVIRF 179
+HG+K++ +PP+S+L+FADD +FC+A+ E +K++L+ +A GQ +N DKS + F
Sbjct: 469 LHGIKVSSSSPPLSHLLFADDSILFCKASEGEMDMVKHVLDLYAKGSGQQVNFDKSSLFF 528
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTPF 275
S N Q + L L + + KY+G F
Sbjct: 529 STNCSQETRDRLARSLNIPQGRGFGKYLGLKF 560
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
IHGVKI + PIS+L FADD +F RAT EE + +IL+ + A GQ +N++KS + +
Sbjct: 673 IHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKSEMSY 732
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+N++ L+ L E KY+G P
Sbjct: 733 SRNLEPDKINTLQMKLAFKTVEGHEKYLGLP 763
>gb|EMJ01337.1| hypothetical protein PRUPE_ppa017266mg, partial [Prunus persica]
Length = 525
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
+ G+K++R P +S+LMFADD IF RAT + + +LN + A GQ I+L KS I F
Sbjct: 192 LQGIKLSRSGPILSHLMFADDTLIFLRATEQNCTNMVQLLNAYCRASGQQISLAKSTIFF 251
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S N L +++ IL M + KY+G P
Sbjct: 252 SPNTPSNLGQQICHILRMPRVDDPGKYLGLP 282
>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 653
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
+HGVK+ ++ P +S+L+FADD +F RA E +K+IL+ + A Q IN+ KS I F
Sbjct: 256 LHGVKVCKRAPTVSHLLFADDSFLFFRANENETRALKDILDTYANASDQLINMQKSEIYF 315
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+NV K L ++L + E RKY+G P
Sbjct: 316 SRNVPVTKKNTLSNMLWVSEGIGIRKYLGLP 346
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
IHGV I R P +S+L +ADD +FC ATV + + +KNI + + A GQ IN DKS I F
Sbjct: 952 IHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICF 1011
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S +K IL M +Y+G P
Sbjct: 1012 SPKSPAAIKEACSAILDMPVVPCHERYLGLP 1042
>ref|XP_004301927.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 968
Score = 65.9 bits (159), Expect = 5e-09
Identities = 38/91 (41%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKN--ILNNFALGQSINLDKSVIRF 179
IHGVK P IS+L+FADD +F RA + EAI +K +L A GQ IN KS I F
Sbjct: 293 IHGVKAAVDAPIISHLLFADDSLLFGRAEIHEAIHVKQCLLLYESAAGQKINFQKSAIAF 352
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
+D K E+ +L + + KY+G P
Sbjct: 353 GPGLDDQTKLEITQMLGLPMVDCHEKYLGLP 383
>ref|XP_004295829.1| PREDICTED: uncharacterized protein LOC101302635 [Fragaria vesca
subsp. vesca]
Length = 913
Score = 65.1 bits (157), Expect = 9e-09
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKN--ILNNFALGQSINLDKSVIRF 179
IHGVK P IS+++FADD +F RA + EAI +K +L A GQ IN KS I F
Sbjct: 223 IHGVKAAVDAPIISHMLFADDSLLFGRAEIHEAIHVKQCLLLYESAAGQKINFQKSAIAF 282
Query: 180 SKNVDQ*LKRELEDIL--MMVECEHKRKYIGTP 272
+D K E+ +L MV+C KY+G P
Sbjct: 283 GPGLDDQTKLEITQMLGVPMVDCH--EKYLGLP 313
>ref|XP_004293032.1| PREDICTED: uncharacterized protein LOC101314917 [Fragaria vesca
subsp. vesca]
Length = 344
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
IHG+ I PPI++L FADD IF +A EE ++N+L + A GQ ++ +KS I F
Sbjct: 205 IHGISIASSAPPINHLFFADDSFIFFKAEGEECQRVQNMLRIYEEASGQKVSFEKSSIAF 264
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
SKNV + EL +L + + +Y+G P
Sbjct: 265 SKNVVMEEQIELAAVLGVERVDKHERYLGLP 295
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
I G KI + P IS+L+FADD +F +A +A +KNIL + + GQSIN KS + +
Sbjct: 1088 ISGAKICKNAPIISHLLFADDCFLFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEVFY 1147
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+NVD +K + IL + + KY+G P
Sbjct: 1148 SRNVDDAVKASISQILGVQQVMGTGKYLGVP 1178
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
IHGV I P I++L FADD IF RA V E +K+IL + ALGQ ++ KS I F
Sbjct: 624 IHGVSIATGAPSINHLFFADDSFIFLRAEVVEWYRLKHILQVYEEALGQQVHFQKSSISF 683
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+NV + + L +L + + KY+G P
Sbjct: 684 SRNVAREAQDRLASLLGVERVDKHDKYLGLP 714
>ref|XP_002520283.1| conserved hypothetical protein [Ricinus communis]
gi|223540502|gb|EEF42069.1| conserved hypothetical
protein [Ricinus communis]
Length = 460
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
IHG KI P IS ++FADD + A EEA ++K+IL N+ A GQ +NL K + +
Sbjct: 11 IHGFKIKPDCPVISSILFADDTMVMGNALAEEAQKLKSILFNYCKASGQRVNLQKFEVLY 70
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+N +K + +IL E E +K +G P
Sbjct: 71 SRNTRLRVKERINNILRFKESEAIKKCLGVP 101
>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
gi|241922442|gb|EER95586.1| hypothetical protein
SORBIDRAFT_01g048580 [Sorghum bicolor]
Length = 517
Score = 62.8 bits (151), Expect = 5e-08
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
I G+KI R P +++L FADD + RA E+A E+K+IL + A GQ IN DKS I F
Sbjct: 88 IEGIKICRGAPRVNHLFFADDSLMLMRARKEDAHELKHILEIYERASGQVINKDKSSIMF 147
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S N K ++ L +++ KY+G P
Sbjct: 148 SPNTSDYFKGKMRKELSIMQEARSEKYLGGP 178
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 62.4 bits (150), Expect = 6e-08
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNFA--LGQSINLDKSVIRF 179
+HG + R + +L FADDL +F +AT E+ +K IL + GQ INL+KS + F
Sbjct: 132 LHGCSVARGASTVLHLFFADDLYLFFKATESESRSLKQILLRYQNLSGQEINLNKSALTF 191
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+N D +KR + IL + E Y+G P
Sbjct: 192 SRNTDDVVKRGICSILQVEEXADPGIYLGMP 222
>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
Length = 1793
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 IHGVKINRQNPPISYLMFADDLTIFCRATVEEAIEIKNILNNF--ALGQSINLDKSVIRF 179
+HG + R P +S+L FAD+ +F +AT E+ +K IL + GQ INL+K + F
Sbjct: 1219 LHGCSVARGAPXVSHLFFADBSYLFFKATESESRSLKQILLRYQNLSGQEINLNKXALTF 1278
Query: 180 SKNVDQ*LKRELEDILMMVECEHKRKYIGTP 272
S+N D +KR + IL + E Y+G P
Sbjct: 1279 SRNTDDVVKRGICSILQVEEQADPGIYLGMP 1309