BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00039663
         (611 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309283.1| PREDICTED: putative ribonuclease H protein A...    61   3e-07
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo...    57   3e-06

>ref|XP_004309283.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 182

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
 Frame = -1

Query: 410 HSAGVGCILCDHTGTCFLAMAKELTHSPSSEHAETSAIQDGPRLADRFGHSRFTLKSDCK 231
           H  G G IL +  G      ++      S  HAE +A+ DG RLA+   H R   ++DC 
Sbjct: 49  HHGGSGVILRNEHGIFQAGASRAYVQLTSPFHAELNALLDGMRLAECLHHDRVIFETDCL 108

Query: 230 SVVDSIRASSVDVSLLGPIHILFHSLLARLHVNITFARRH--FNVPAHFLSQCATSAYRS 57
            +  +++   VD+S LG   +    +++R HV+   A  +   N  AH L+  A  +  S
Sbjct: 109 MLTQALQQQDVDLSSLGDTIVDVKEIMSR-HVDFRVAHIYCEANRVAHVLANHALHSSES 167

Query: 56  NIWIGVAPH 30
             W  +APH
Sbjct: 168 QSWFTIAPH 176


>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
          Length = 940

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
 Frame = -1

Query: 410  HSAGVGCILCDHTGTCFLAMAKELTHSPSSEHAETSAIQDGPRLADRFGHSRFTLKSDCK 231
            +S G+G +  DH+G C  A  +  +     E AE  AI+   R A   GH +  L SDC 
Sbjct: 803  NSFGLGFLFRDHSGLCLFAANERHSGCIQPEMAEALAIRCALRTAMEEGHQKIVLASDCL 862

Query: 230  SVVDSIRASSVDVSLLGPIHILFHSLLAR-LHVNITFARRHFNVPAHFLSQCA----TSA 66
            +++  I++ + D S++G +    + L A  L  +     R  N  AH L+QC+     + 
Sbjct: 863  AIIQKIQSGARDRSMVGALVSDINFLAAGFLDCSFIHVNRVTNAAAHLLAQCSEQTVCNT 922

Query: 65   YRSNI 51
            YRS I
Sbjct: 923  YRSVI 927