BLASTX nr result

ID: Rauwolfia21_contig00039654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00039654
         (309 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360578.1| PREDICTED: beta-amylase-like [Solanum tubero...   106   3e-21
ref|XP_004243448.1| PREDICTED: beta-amylase-like [Solanum lycope...   106   3e-21
pdb|1Q6C|A Chain A, Crystal Structure Of Soybean Beta-Amylase Co...   105   5e-21
gb|AAZ38831.1| beta-amylase [Glycine max]                             105   5e-21
pdb|1WDS|A Chain A, The Role Of An Inner Loop In The Catalytic M...   105   5e-21
pdb|1WDQ|A Chain A, The Role Of An Inner Loop In The Catalytic M...   105   5e-21
pdb|1WDR|A Chain A, The Role Of An Inner Loop In The Catalytic M...   105   5e-21
pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Cataly...   105   5e-21
pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...   105   5e-21
pdb|1Q6G|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...   105   5e-21
pdb|1Q6D|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...   105   5e-21
pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mu...   105   5e-21
dbj|BAA09462.1| beta-amylase [Glycine max] gi|2196550|dbj|BAA204...   105   5e-21
pdb|2DQX|A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean          105   5e-21
dbj|BAD93288.1| beta-amylase [Glycine max]                            105   5e-21
dbj|BAD93291.1| beta-amylase [Glycine max]                            105   5e-21
dbj|BAD93289.1| beta-amylase [Glycine max]                            105   5e-21
dbj|BAD93290.1| beta-amylase [Glycine max]                            105   5e-21
gb|ESW04583.1| hypothetical protein PHAVU_011G107700g [Phaseolus...   105   8e-21
gb|AAY40266.1| beta-amylase [Glycine max]                             104   1e-20

>ref|XP_006360578.1| PREDICTED: beta-amylase-like [Solanum tuberosum]
          Length = 578

 Score =  106 bits (265), Expect = 3e-21
 Identities = 47/55 (85%), Positives = 53/55 (96%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE G+I+DIEVGLGPAGELRYPSYT++QGW++PGIGEFQ
Sbjct: 223 IYSDYMRSFRENMSDFLEAGSIVDIEVGLGPAGELRYPSYTQSQGWKFPGIGEFQ 277


>ref|XP_004243448.1| PREDICTED: beta-amylase-like [Solanum lycopersicum]
          Length = 575

 Score =  106 bits (265), Expect = 3e-21
 Identities = 47/55 (85%), Positives = 53/55 (96%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE G+I+DIEVGLGPAGELRYPSYT++QGW++PGIGEFQ
Sbjct: 220 IYSDYMRSFRENMSDFLEAGSIVDIEVGLGPAGELRYPSYTQSQGWKFPGIGEFQ 274


>pdb|1Q6C|A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With
           Maltose gi|62738228|pdb|1WDP|A Chain A, The Role Of An
           Inner Loop In The Catalytic Mechanism Of Soybean
           Beta-Amylase gi|157830279|pdb|1BFN|A Chain A,
           Beta-AmylaseBETA-Cyclodextrin Complex
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>gb|AAZ38831.1| beta-amylase [Glycine max]
          Length = 496

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 154 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 208


>pdb|1WDS|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of
           Soybean Beta- Amylase
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>pdb|1WDQ|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of
           Soybean Beta-Amylase
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>pdb|1WDR|A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of
           Soybean Beta-Amylase
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>pdb|1V3I|A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction
           Of Soybean Beta-Amylase
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>pdb|1UKP|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant
           Substituted At Surface Region gi|46015830|pdb|1UKP|B
           Chain B, Crystal Structure Of Soybean Beta-Amylase
           Mutant Substituted At Surface Region
           gi|46015831|pdb|1UKP|C Chain C, Crystal Structure Of
           Soybean Beta-Amylase Mutant Substituted At Surface
           Region gi|46015832|pdb|1UKP|D Chain D, Crystal Structure
           Of Soybean Beta-Amylase Mutant Substituted At Surface
           Region
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>pdb|1Q6G|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t)
           With Increased Ph Optimum
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>pdb|1Q6D|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t)
           With Increased Ph Optimum
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>pdb|1UKO|A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant
           Substituted At Surface Region gi|46015826|pdb|1UKO|B
           Chain B, Crystal Structure Of Soybean Beta-Amylase
           Mutant Substituted At Surface Region
           gi|46015827|pdb|1UKO|C Chain C, Crystal Structure Of
           Soybean Beta-Amylase Mutant Substituted At Surface
           Region gi|46015828|pdb|1UKO|D Chain D, Crystal Structure
           Of Soybean Beta-Amylase Mutant Substituted At Surface
           Region
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>dbj|BAA09462.1| beta-amylase [Glycine max] gi|2196550|dbj|BAA20453.1| beta-amylase
           [Glycine max] gi|71673373|gb|AAZ38832.1| beta-amylase
           [Glycine max]
          Length = 496

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 154 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 208


>pdb|2DQX|A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean
          Length = 495

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 153 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 207


>dbj|BAD93288.1| beta-amylase [Glycine max]
          Length = 496

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 154 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 208


>dbj|BAD93291.1| beta-amylase [Glycine max]
          Length = 496

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 154 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 208


>dbj|BAD93289.1| beta-amylase [Glycine max]
          Length = 496

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 154 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 208


>dbj|BAD93290.1| beta-amylase [Glycine max]
          Length = 496

 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIGEFQ
Sbjct: 154 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQ 208


>gb|ESW04583.1| hypothetical protein PHAVU_011G107700g [Phaseolus vulgaris]
          Length = 497

 Score =  105 bits (261), Expect = 8e-21
 Identities = 47/55 (85%), Positives = 51/55 (92%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G I+DIEVGLGPAGELRYPSY + QGWE+PGIGEFQ
Sbjct: 155 IYSDYMKSFRENMSDFLESGLIVDIEVGLGPAGELRYPSYPQNQGWEFPGIGEFQ 209


>gb|AAY40266.1| beta-amylase [Glycine max]
          Length = 496

 Score =  104 bits (260), Expect = 1e-20
 Identities = 47/55 (85%), Positives = 52/55 (94%)
 Frame = -3

Query: 307 IYSDYMTSFRENMSDFLETGTIIDIEVGLGPAGELRYPSYTKTQGWEYPGIGEFQ 143
           IYSDYM SFRENMSDFLE+G IIDIEVGLGPAGELRYPSY ++QGWE+PGIG+FQ
Sbjct: 154 IYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGDFQ 208


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