BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00039556
         (735 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containi...    97   4e-18
ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containi...    94   5e-17
ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containi...    94   5e-17
gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis]      71   4e-10
gb|EPS68102.1| hypothetical protein M569_06665 [Genlisea aurea]        67   5e-09
ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
emb|CBI26570.3| unnamed protein product [Vitis vinifera]               64   7e-08
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]    62   3e-07
ref|XP_002309826.2| pentatricopeptide repeat-containing family p...    57   6e-06

>ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Solanum lycopersicum]
          Length = 1464

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 59/140 (42%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
 Frame = -3

Query: 451 MAYTGVLPSFANPPLRSSRKSKVHRNTPASSC-LDCS-----TTTVNEQE--TVKKFTYS 296
           MA +  L S A P   S+ KSKV R  P  SC LD S     ++TV+E+   T KKFTY+
Sbjct: 1   MAASTALLSIAPPQFSSTAKSKVTRKPPFCSCSLDSSNSATTSSTVSEERDITPKKFTYT 60

Query: 295 RASPSVRWPHLKFTDTHHNSHHSSFTVTSPPTXXXXXXXXXXVNIGNYKSKAEVETSHNL 116
           RASPS RWPHLKFT+TH NS  S  +V +P             N+G+Y+ +   +     
Sbjct: 61  RASPSTRWPHLKFTETHQNSQPSPLSVAAPSVKDKEFDSGSDGNVGSYEGRRMEKNGEES 120

Query: 115 GDDSLLNVNDEEPESVGRPS 56
            D +    NDE  E +GRPS
Sbjct: 121 LDPNGFQSNDETQEVLGRPS 140


>ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1277

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 59/140 (42%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
 Frame = -3

Query: 451 MAYTGVLPSFANPPLRSSRKSKVHRNTPASSC-LDCS-----TTTVNEQE--TVKKFTYS 296
           MA +  L S A P   S+ KSKV R  P  SC LD S     ++TV+E+   T KKFTY+
Sbjct: 1   MAASTALLSIAPPQFNSTAKSKVTRKPPFCSCSLDSSNSATTSSTVSEERDNTPKKFTYT 60

Query: 295 RASPSVRWPHLKFTDTHHNSHHSSFTVTSPPTXXXXXXXXXXVNIGNYKSKAEVETSHNL 116
           RASPS RWPHLKFTDTH +S  S  +V  P             N+G Y+ +   +   +L
Sbjct: 61  RASPSSRWPHLKFTDTHQSSQPSPLSVAVPSVKDVEFDSGSDGNVGCYEGRGMEKGEESL 120

Query: 115 GDDSLLNVNDEEPESVGRPS 56
             +    +NDE  E +GRPS
Sbjct: 121 NSNG-FQLNDETQEVLGRPS 139


>ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1476

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 59/140 (42%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
 Frame = -3

Query: 451 MAYTGVLPSFANPPLRSSRKSKVHRNTPASSC-LDCS-----TTTVNEQE--TVKKFTYS 296
           MA +  L S A P   S+ KSKV R  P  SC LD S     ++TV+E+   T KKFTY+
Sbjct: 1   MAASTALLSIAPPQFNSTAKSKVTRKPPFCSCSLDSSNSATTSSTVSEERDNTPKKFTYT 60

Query: 295 RASPSVRWPHLKFTDTHHNSHHSSFTVTSPPTXXXXXXXXXXVNIGNYKSKAEVETSHNL 116
           RASPS RWPHLKFTDTH +S  S  +V  P             N+G Y+ +   +   +L
Sbjct: 61  RASPSSRWPHLKFTDTHQSSQPSPLSVAVPSVKDVEFDSGSDGNVGCYEGRGMEKGEESL 120

Query: 115 GDDSLLNVNDEEPESVGRPS 56
             +    +NDE  E +GRPS
Sbjct: 121 NSNG-FQLNDETQEVLGRPS 139


>gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis]
          Length = 1494

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 27/159 (16%)
 Frame = -3

Query: 451 MAYTGVLPSFANPPLR-----------SSRKSKVHRNTP---------ASSCLDCSTT-- 338
           MA+TGV+ S ++P L            SS  SKVHR T           SS   CS++  
Sbjct: 1   MAFTGVVSSVSSPILHKDSFSSSSSSSSSSSSKVHRPTSFSCSSIPTTCSSASSCSSSNA 60

Query: 337 -----TVNEQETVKKFTYSRASPSVRWPHLKFTDTHHNSHHSSFTVTSPPTXXXXXXXXX 173
                +++  +  +KF+YSRASPSVRWP +K ++++  S  + FT+ SP           
Sbjct: 61  EPLSDSISFDKNTQKFSYSRASPSVRWPDMKLSESYDQSPQTQFTIVSPELT-------- 112

Query: 172 XVNIGNYKSKAEVETSHNLGDDSLLNVNDEEPESVGRPS 56
                  +     E + NL     L+ NDE  + +GRPS
Sbjct: 113 -------RDSESTEKADNLRSLDSLDENDETQQVLGRPS 144


>gb|EPS68102.1| hypothetical protein M569_06665 [Genlisea aurea]
          Length = 1418

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 36/61 (59%), Positives = 42/61 (68%)
 Frame = -3

Query: 439 GVLPSFANPPLRSSRKSKVHRNTPASSCLDCSTTTVNEQETVKKFTYSRASPSVRWPHLK 260
           GVL  FA PPL+S RKS       A  CL CS+++   +ET  KFTYSRASPSVRWPH+K
Sbjct: 7   GVL-GFAPPPLKSRRKSAARGYDDAPFCL-CSSSSAAVEETCTKFTYSRASPSVRWPHMK 64

Query: 259 F 257
           F
Sbjct: 65  F 65


>ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1496

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
 Frame = -3

Query: 451 MAYTGVL-----PSFANPPLRSSRKSKVHRNTPASSCLDCSTTTV----------NEQET 317
           M++TGVL     P F +    SS  S        S+CL CS T            N+  T
Sbjct: 1   MSFTGVLALATSPLFHSDSSLSSSSSSSSDKVRKSTCLSCSLTQTPSTSSSEQPNNDSNT 60

Query: 316 VK-----KFTYSRASPSVRWPHLKFTDTHHNSHHSSFTVTSPPTXXXXXXXXXXVNIGNY 152
            +     KF+YSRASPSVRWPHLK ++T+ ++ H+   V                 + + 
Sbjct: 61  SQINNNNKFSYSRASPSVRWPHLKLSETYPSAPHTPVVVED---------AGFSAQLSDS 111

Query: 151 KSKAEVETSHNLGDDSL-LNVNDEEPESVGRPS 56
            S+++ E + ++G  +L L+ NDE    +GRPS
Sbjct: 112 DSESKEEDNGDVGSAALGLDKNDETQLVLGRPS 144


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 39/90 (43%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
 Frame = -3

Query: 451 MAYTGVLPSFANP----PLRSSRKSKVHRNTPASS-------CLDCSTTTVNEQETVKKF 305
           MA  GVL   + P    P  SS  SKV R++ A+        C   ST+T  EQ  ++KF
Sbjct: 1   MACAGVLAFSSAPKNSDPSSSSSSSKVCRSSTATVSCVSHCVCSAASTSTATEQANLQKF 60

Query: 304 TYSRASPSVRWPHLKFTDTHHNSHHSSFTV 215
           +YSRASPSVRWPHLK T+ +  S   +  V
Sbjct: 61  SYSRASPSVRWPHLKLTENYPPSQRPTHVV 90


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
 Frame = -3

Query: 451 MAYTGVLPSFANP----PLRSSRKSKVHRNTPASS-------CLDCSTTTVNEQETVKKF 305
           MA  GVL   + P    P  SS  SKV  ++ A+        C   ST+T  EQ  ++KF
Sbjct: 1   MACAGVLAFSSXPKNSDPSSSSSSSKVCXSSTATVSCVSHCVCSAASTSTATEQANLQKF 60

Query: 304 TYSRASPSVRWPHLKFTDTHHNSHHSSFTV 215
           +YSRASPSVRWPHLK T+ +  S   +  V
Sbjct: 61  SYSRASPSVRWPHLKLTENYPPSQRPTHVV 90


>ref|XP_002309826.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550333963|gb|EEE90276.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 1484

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
 Frame = -3

Query: 454 SMAYTGVLPSFANPPLR----SSRKSKVHRNTPASSCLDCSTTTVNEQETV-KKFTYSRA 290
           SM  +GVL    + P +    +S    +H++ P+++  +    + +  +   +KF+YSRA
Sbjct: 4   SMECSGVLAFLPSTPSKVCKSTSLSCSLHQSAPSTATTELKNNSTDCSDNAPQKFSYSRA 63

Query: 289 SPSVRWPHLKFTDTHHNSHHSSFTVTS 209
           SPSVRWP LK  +T+H+S  + FT  S
Sbjct: 64  SPSVRWPQLKLNETYHSSPQTQFTEMS 90