BLASTX nr result
ID: Rauwolfia21_contig00038912
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00038912
(307 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB25448.1| hypothetical protein L484_005904 [Morus notabilis] 84 1e-14
ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
gb|EMJ15335.1| hypothetical protein PRUPE_ppa018240mg [Prunus pe... 83 4e-14
ref|XP_004488292.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_006468055.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
ref|XP_006449009.1| hypothetical protein CICLE_v10018083mg [Citr... 79 5e-13
gb|ESW10502.1| hypothetical protein PHAVU_009G215000g [Phaseolus... 79 8e-13
gb|ESW10499.1| hypothetical protein PHAVU_009G2147000g, partial ... 79 8e-13
gb|ESW10492.1| hypothetical protein PHAVU_009G214200g [Phaseolus... 77 2e-12
ref|XP_006597934.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
gb|EOY27640.1| Pentatricopeptide repeat protein 78 [Theobroma ca... 75 1e-11
ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago t... 72 1e-10
ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group] g... 64 3e-08
gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sat... 64 3e-08
ref|XP_006404535.1| hypothetical protein EUTSA_v10000062mg [Eutr... 63 4e-08
ref|XP_004971712.1| PREDICTED: putative pentatricopeptide repeat... 63 5e-08
ref|XP_006490200.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea m... 62 8e-08
>gb|EXB25448.1| hypothetical protein L484_005904 [Morus notabilis]
Length = 713
Score = 84.3 bits (207), Expect = 1e-14
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLR 149
LRD+GLKK PGCSWLE+NG+VHEFR AD SHP+++ IY ILGN+ELE K L+
Sbjct: 654 LRDRGLKKTPGCSWLEINGRVHEFRVADWSHPRSNDIYTILGNLELEIKMLK 705
>ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 706
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSED 134
LR+KGLKK PGCSWLE+NG V EFR AD++HP+A IY ILGN+ELE K++R+ S D
Sbjct: 643 LRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPD 699
>ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSED 134
LR+KGLKK PGCSWLE+NG V EFR AD++HP+A IY ILGN+ELE K++R+ S D
Sbjct: 544 LRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPD 600
>ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSED 134
LR+KGLKK PGCSWLE+NG V EFR AD++HP+A IY ILGN+ELE K++R+ S D
Sbjct: 659 LRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPD 715
>gb|EMJ15335.1| hypothetical protein PRUPE_ppa018240mg [Prunus persica]
Length = 696
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLR 149
LRD+GLKK PGCSW+E+NG HEFR AD+SHP++D IYAIL N+E E KD R
Sbjct: 640 LRDRGLKKTPGCSWVEINGCPHEFRVADRSHPRSDGIYAILRNLEWEIKDAR 691
>ref|XP_004488292.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cicer arietinum]
Length = 714
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSEDVNY 125
LRD+GLKK PGCSWLE+NGQVHEFR AD+SHP+++ IY++L +ELE + +DV
Sbjct: 649 LRDRGLKKTPGCSWLELNGQVHEFRVADQSHPRSEDIYSVLKVLELE----ADMEDDVEL 704
Query: 124 FF 119
FF
Sbjct: 705 FF 706
>ref|XP_006468055.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Citrus sinensis]
Length = 727
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSED 134
LRD+GLKK PGCSW+E+ VHEF AAD+SHPQADAIY ILG +ELE + R+ S +
Sbjct: 666 LRDRGLKKTPGCSWIEIGKLVHEFWAADQSHPQADAIYTILGILELEIMEGRRESSE 722
>ref|XP_006449009.1| hypothetical protein CICLE_v10018083mg [Citrus clementina]
gi|557551620|gb|ESR62249.1| hypothetical protein
CICLE_v10018083mg [Citrus clementina]
Length = 727
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/57 (64%), Positives = 44/57 (77%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSED 134
LRD+GLKK PGCSW+E VHEF AAD+SHPQADAIY ILG +ELE + R+ S +
Sbjct: 666 LRDRGLKKTPGCSWIETGKLVHEFWAADQSHPQADAIYTILGILELEIMEGRRESSE 722
>gb|ESW10502.1| hypothetical protein PHAVU_009G215000g [Phaseolus vulgaris]
Length = 730
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/61 (60%), Positives = 46/61 (75%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSEDVNY 125
LRD+GLKK PGCSWLE+NGQVHEFR ADKSH + + IY+IL +ELE D+ +D+
Sbjct: 650 LRDRGLKKTPGCSWLELNGQVHEFRVADKSHQRWEDIYSILNVLELEAGDME--DDDLEL 707
Query: 124 F 122
F
Sbjct: 708 F 708
>gb|ESW10499.1| hypothetical protein PHAVU_009G2147000g, partial [Phaseolus
vulgaris]
Length = 115
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSE 137
LRD+GLKK PGCSWLE+NGQVHEFR ADKSH + + IY+IL +ELE D+ E
Sbjct: 52 LRDRGLKKTPGCSWLELNGQVHEFRVADKSHKRWEDIYSILNVLELEAGDMEDYLE 107
>gb|ESW10492.1| hypothetical protein PHAVU_009G214200g [Phaseolus vulgaris]
Length = 732
Score = 77.0 bits (188), Expect = 2e-12
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDL 152
LRD+GLKK PGCSWLE+NGQVH+FR ADKSH + + IY+IL +ELE D+
Sbjct: 653 LRDRGLKKTPGCSWLELNGQVHDFRVADKSHQRWEDIYSILNVLELEAGDM 703
>ref|XP_006597934.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 734
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDL 152
LRD+GLKK PG SWLE+NGQVHEFR AD+SHP+ + IY+IL +ELE D+
Sbjct: 659 LRDRGLKKTPGYSWLELNGQVHEFRVADQSHPRWEDIYSILKVLELEAGDM 709
>gb|EOY27640.1| Pentatricopeptide repeat protein 78 [Theobroma cacao]
Length = 697
Score = 74.7 bits (182), Expect = 1e-11
Identities = 31/52 (59%), Positives = 42/52 (80%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLR 149
L+++GLKK PGCSWL++NG VHEFR AD+SHP+A IYA++G +E K+ R
Sbjct: 638 LKERGLKKIPGCSWLQINGHVHEFRVADQSHPKAKDIYALIGILEFAIKEAR 689
>ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484604|gb|AES65807.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 1040
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSEDVNY 125
LRD+GLKK PGCSW+ ++GQ HEFR AD SHP+++ IY++L +ELE +D+ +
Sbjct: 651 LRDRGLKKTPGCSWVVLDGQFHEFRVADHSHPRSEDIYSVLKVLELE---AGMEDDDLEF 707
Query: 124 FFN 116
FF+
Sbjct: 708 FFD 710
>ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa
Japonica Group] gi|125578262|gb|EAZ19408.1| hypothetical
protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 63.5 bits (153), Expect = 3e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -1
Query: 307 NLRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDL 152
++++KG++K P CSW+E G+VHEFR DKSHP +D IY L + LE K +
Sbjct: 501 DMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTM 552
>gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 63.5 bits (153), Expect = 3e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -1
Query: 307 NLRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDL 152
++++KG++K P CSW+E G+VHEFR DKSHP +D IY L + LE K +
Sbjct: 548 DMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTM 599
>ref|XP_006404535.1| hypothetical protein EUTSA_v10000062mg [Eutrema salsugineum]
gi|557105663|gb|ESQ45988.1| hypothetical protein
EUTSA_v10000062mg [Eutrema salsugineum]
Length = 708
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSEDVNY 125
+R GL+K+PGCSW+E++G+VH F A DKSHP+ IY L + RKL + +
Sbjct: 648 MRASGLEKHPGCSWIEIDGKVHSFSARDKSHPETKEIYEKLSEV------ARKLESEAIF 701
Query: 124 FFNLEKV 104
+NL +
Sbjct: 702 IYNLHMI 708
>ref|XP_004971712.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Setaria italica]
Length = 667
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/52 (50%), Positives = 39/52 (75%)
Frame = -1
Query: 307 NLRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDL 152
++ +KG+KK PGCS +EMNG +HEF A D+SHP ++ IY+ L NI + ++L
Sbjct: 523 SIMEKGIKKEPGCSLIEMNGMIHEFVAGDRSHPMSNEIYSKLENIITDLENL 574
>ref|XP_006490200.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Citrus sinensis]
Length = 762
Score = 62.0 bits (149), Expect = 8e-08
Identities = 23/51 (45%), Positives = 39/51 (76%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDL 152
++++G+KK PGCSW+ + G+VH+F A+D+ HPQ + IYA L ++ +FK +
Sbjct: 702 MKEQGVKKEPGCSWISVEGRVHKFYASDQQHPQKEDIYATLEELKEKFKSM 752
>tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea mays]
Length = 1056
Score = 62.0 bits (149), Expect = 8e-08
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = -1
Query: 304 LRDKGLKKNPGCSWLEMNGQVHEFRAADKSHPQADAIYAILGNIELEFKDLRKLSEDV 131
+R +GLKK PGCS++E NG+VH F A D SHPQA IY ++ +EL K+ + E V
Sbjct: 911 MRKRGLKKEPGCSYVEHNGRVHLFMADDHSHPQARRIYELVTRLELMVKEKSGVRESV 968