BLASTX nr result
ID: Rauwolfia21_contig00038390
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00038390
(443 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera] 68 1e-09
ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ... 66 5e-09
gb|EOX95584.1| Pentatricopeptide repeat-containing protein, mito... 65 9e-09
gb|AHB18410.1| pentatricopeptide repeat-containing protein [Goss... 62 6e-08
ref|XP_004494974.1| PREDICTED: conserved oligomeric Golgi comple... 62 6e-08
ref|XP_006605274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 62 8e-08
gb|EMJ20615.1| hypothetical protein PRUPE_ppa021922mg [Prunus pe... 62 8e-08
gb|ESW11013.1| hypothetical protein PHAVU_009G258200g, partial [... 62 1e-07
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple... 61 2e-07
emb|CBI38715.3| unnamed protein product [Vitis vinifera] 58 1e-06
ref|XP_002320901.2| hypothetical protein POPTR_0014s10150g [Popu... 57 3e-06
ref|XP_002515077.1| pentatricopeptide repeat-containing protein,... 57 3e-06
ref|XP_006491485.1| PREDICTED: conserved oligomeric Golgi comple... 57 3e-06
>emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/55 (52%), Positives = 42/55 (76%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATRSK 279
W+ I+PRI EVD+ R ++ DE LK+EI PNTR++E G GLEEY+I+K+ +S+
Sbjct: 366 WVAIIPRICEVDKLVRMENIFDEXLKLEITPNTRLVEAGIGLEEYVIRKVRDKSR 420
>ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 451
Score = 65.9 bits (159), Expect = 5e-09
Identities = 30/55 (54%), Positives = 43/55 (78%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATRSK 279
WM I+P+I EVD+ + D ++EVLKIEIK +TRI++ G GLE+YLI+KI +S+
Sbjct: 395 WMIIVPQICEVDDGVKIDGVLEEVLKIEIKGDTRIVDAGIGLEDYLIRKIRAKSR 449
>gb|EOX95584.1| Pentatricopeptide repeat-containing protein, mitochondrial
[Theobroma cacao]
Length = 461
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATRSK 279
W+ I+PRI E E ER ++EV+K+EIK +TRI++ G GLE+YLI+KI +RSK
Sbjct: 405 WVLIIPRICEDYETERMGEILEEVMKVEIKRDTRIVDAGTGLEDYLIRKIRSRSK 459
>gb|AHB18410.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 458
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATRSK 279
W I+P I E E E+ + ++EV+KIEIK +TRI+E G GLE+YLI+KI RSK
Sbjct: 404 WGTIVPTICEDYETEKMEEILEEVMKIEIKRDTRIVEAGIGLEDYLIRKIRNRSK 458
>ref|XP_004494974.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Cicer
arietinum]
Length = 1302
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/55 (50%), Positives = 42/55 (76%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATRSK 279
WM ++P+I EVD+ + ++EVLKIEIK +TRI++ G GLE+YLI+KI +S+
Sbjct: 385 WMIVVPQICEVDDGLKIGGVLEEVLKIEIKGHTRIVDAGIGLEDYLIRKIRAKSR 439
>ref|XP_006605274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g01400, mitochondrial-like, partial [Glycine
max]
Length = 403
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATRSK 279
WM I+P I EVD++ + ++EVLKIEIK +TRI++ G GLE YLI KI +RS+
Sbjct: 347 WMIIMPVICEVDDEGKSSGALEEVLKIEIKGHTRIVDAGIGLENYLIGKIRSRSR 401
>gb|EMJ20615.1| hypothetical protein PRUPE_ppa021922mg [Prunus persica]
Length = 465
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATRSK 279
W+ I+P I E E ER + + EV+K+EI+PNTRI+E GLE+YLIKKI + +
Sbjct: 408 WLTIVPGICEEIELERLEEILREVMKVEIRPNTRIVEAAIGLEDYLIKKIRAKPR 462
>gb|ESW11013.1| hypothetical protein PHAVU_009G258200g, partial [Phaseolus
vulgaris]
Length = 418
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATRSK 279
WM ++P I EVD+ + ++EVLKIEIK +TRI++ G GLE YLIKKI S+
Sbjct: 362 WMVLMPVICEVDDGGKISGALEEVLKIEIKGHTRIVDAGIGLENYLIKKIRANSR 416
>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
vinifera]
Length = 1105
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYL 306
W+ I+PRI EVD+ R ++ DE LK+EI PNTR++E G GLEEY+
Sbjct: 323 WVAIIPRICEVDKLVRMENIFDEALKLEITPNTRLVEAGIGLEEYM 368
>emb|CBI38715.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATR-SKNR 273
W+ I+PRI EVD+ R ++ DE LK+EI PNTR++E G GLEE ++ I + KNR
Sbjct: 339 WVAIIPRICEVDKLVRMENIFDEALKLEITPNTRLVEAGIGLEERGLELIGSDCRKNR 396
>ref|XP_002320901.2| hypothetical protein POPTR_0014s10150g [Populus trichocarpa]
gi|550323886|gb|EEE99216.2| hypothetical protein
POPTR_0014s10150g [Populus trichocarpa]
Length = 475
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKK 297
W+ ++ RI EVD+ +R +D+V K+E+K +TRI+E G GLEEYLIK+
Sbjct: 419 WVMMVSRICEVDDLQRIGEILDKVKKVELKGDTRIVEAGIGLEEYLIKR 467
>ref|XP_002515077.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545557|gb|EEF47061.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 262
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKK 297
W+ ILPRI EVD+ E ++D+ + +EI +TRI+E G GLE+YLIKK
Sbjct: 207 WIIILPRICEVDDLEGIRQSLDKAMMVEIMGDTRIVEAGIGLEDYLIKK 255
>ref|XP_006491485.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
[Citrus sinensis]
Length = 1352
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = -1
Query: 443 WMEILPRISEVDEKERFDHTIDEVLKIEIKPNTRIMEVGAGLEEYLIKKIATRSKNR*FS 264
W+ I+P+I +E E+ ++E++K+EIK +TRI+E G GLE+YLI K +R + F
Sbjct: 414 WVMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSRPRREKFG 473
Query: 263 LECST 249
T
Sbjct: 474 TNNGT 478