BLASTX nr result
ID: Rauwolfia21_contig00038287
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00038287
(260 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ28309.1| hypothetical protein PRUPE_ppa026753mg, partial [... 62 8e-13
ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313... 61 4e-12
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A... 63 5e-12
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 61 1e-11
gb|EOY04491.1| Non-LTR retroelement reverse transcriptase-like p... 55 2e-10
gb|EMJ07680.1| hypothetical protein PRUPE_ppa018770mg [Prunus pe... 59 1e-09
gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at t... 54 2e-09
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 59 4e-09
gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [... 53 3e-08
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 50 2e-07
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 52 3e-07
gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptas... 46 3e-07
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 57 3e-07
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 57 3e-07
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 57 3e-07
gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao] 50 4e-07
emb|CAN78815.1| hypothetical protein VITISV_041732 [Vitis vinifera] 60 4e-07
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 54 4e-07
ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296... 49 5e-07
emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera] 59 5e-07
>gb|EMJ28309.1| hypothetical protein PRUPE_ppa026753mg, partial [Prunus persica]
Length = 172
Score = 62.4 bits (150), Expect(2) = 8e-13
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = -3
Query: 159 KKAKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
K + WK++ LS A RITLIQ ++IP YTMQ KLP +L E+L+K ++ FLW
Sbjct: 63 KLSAWKSQLLSMAGRITLIQSVASSIPQYTMQMAKLPQALCEDLDKSSKSFLW 115
Score = 36.6 bits (83), Expect(2) = 8e-13
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -1
Query: 230 YLGMPILHGRSTKALYDFLTVKVQKKLS 147
YLG+P++ GR TKA Y + VKVQ KLS
Sbjct: 38 YLGVPLVQGRVTKATYKGVLVKVQAKLS 65
>ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313223 [Fragaria vesca
subsp. vesca]
Length = 543
Score = 60.8 bits (146), Expect(2) = 4e-12
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = -3
Query: 153 AKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
+ WK++ L+ A R+TLIQ + IP+Y MQ K P SL + L+KLNR FLW
Sbjct: 352 SSWKSKVLNMAGRLTLIQSVTSAIPNYAMQTTKFPVSLCDRLDKLNRNFLW 402
Score = 35.8 bits (81), Expect(2) = 4e-12
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKLS 147
+YLGMP++H R K YD + KVQ +LS
Sbjct: 324 KYLGMPLIHSRVNKHTYDAIFYKVQSRLS 352
>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 407
Score = 63.2 bits (152), Expect(2) = 5e-12
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = -3
Query: 153 AKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
+ WK++ LS A R+TLIQ + IP+Y MQ K P SL E L+KLNR FLW
Sbjct: 40 SSWKSKVLSMAGRLTLIQSVSSAIPNYAMQTAKFPVSLCENLDKLNRNFLW 90
Score = 33.1 bits (74), Expect(2) = 5e-12
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKLS 147
+YLGMP++H R K YD + +VQ +LS
Sbjct: 12 KYLGMPLIHSRVNKHTYDGIFDQVQSRLS 40
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 61.2 bits (147), Expect(2) = 1e-11
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -3
Query: 159 KKAKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
K A WK +TLS A R TLIQ A ++IP YTMQ KLP S +++++ +R FLW
Sbjct: 781 KLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRSFLW 833
Score = 33.5 bits (75), Expect(2) = 1e-11
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKLSG 144
+YLG+P ++GRS+K Y +L ++ KL+G
Sbjct: 755 KYLGVPTINGRSSKREYQYLVDRINGKLAG 784
>gb|EOY04491.1| Non-LTR retroelement reverse transcriptase-like protein [Theobroma
cacao]
Length = 393
Score = 55.1 bits (131), Expect(2) = 2e-10
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = -3
Query: 165 GPKKAKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
G K +W + LS A R++L+Q +T+ SY MQ LP S+ E++KLNR F+W
Sbjct: 88 GRKLEQWSNKFLSMAGRVSLVQAVSSTMASYIMQTTLLPDSVAMEIDKLNRNFIW 142
Score = 35.8 bits (81), Expect(2) = 2e-10
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKL 150
+YLG P+LHGR TKA Y L KV +KL
Sbjct: 64 KYLGAPMLHGRVTKATYSDLCNKVGRKL 91
>gb|EMJ07680.1| hypothetical protein PRUPE_ppa018770mg [Prunus persica]
Length = 790
Score = 59.3 bits (142), Expect(2) = 1e-09
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = -3
Query: 153 AKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
A WK++ LS A R TLIQ A+IP Y MQ KLP S+ +L++LNR F W
Sbjct: 649 ASWKSKLLSLAGRATLIQAVTASIPIYAMQTTKLPVSVCNDLDRLNRNFFW 699
Score = 28.5 bits (62), Expect(2) = 1e-09
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 230 YLGMPILHGRSTKALYDFLTVKVQKKLS 147
YLGMP+LH K Y L KV +L+
Sbjct: 622 YLGMPLLHSTIGKHTYSSLVDKVHNRLA 649
>gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like
protein [Theobroma cacao]
Length = 620
Score = 54.3 bits (129), Expect(2) = 2e-09
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = -3
Query: 147 WKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
WKA +LS R+TL+Q + +IP YTMQ + +P + +++E L R FLW
Sbjct: 356 WKASSLSSTGRLTLVQSVLTSIPLYTMQTISIPLEICKKIELLCRNFLW 404
Score = 32.7 bits (73), Expect(2) = 2e-09
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKL 150
+Y+G+P+LHGR T +Y L KV+ +L
Sbjct: 326 KYIGVPLLHGRKTAHIYKSLIDKVRSRL 353
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 58.9 bits (141), Expect(2) = 4e-09
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = -3
Query: 147 WKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
WK+R+LS A RITL + + +IP +TM + LP+SL+E+L+K++R FLW
Sbjct: 577 WKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLW 625
Score = 27.3 bits (59), Expect(2) = 4e-09
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKLSG 144
+YLGMP+L R K + + +V +LSG
Sbjct: 547 KYLGMPVLQKRINKDTFGEVLERVSSRLSG 576
>gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
Length = 387
Score = 53.1 bits (126), Expect(2) = 3e-08
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = -3
Query: 147 WKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
WK++ LS A R TLIQ ++IP YTMQ KLP S+ L+++N F W
Sbjct: 154 WKSKHLSLAGRATLIQSVTSSIPVYTMQTAKLPVSVCNALDRINCNFFW 202
Score = 30.0 bits (66), Expect(2) = 3e-08
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 230 YLGMPILHGRSTKALYDFLTVKVQKKLS 147
YLGMPILH + K Y L KVQ L+
Sbjct: 125 YLGMPILHNKVCKDTYGGLVNKVQNCLT 152
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = -3
Query: 147 WKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
W A LS A RITL Q + +P Y MQ LP S+ +L+++ R+FLW
Sbjct: 209 WAASQLSLAGRITLTQSVLQAVPIYAMQTTNLPGSIKTKLDQICRRFLW 257
Score = 30.8 bits (68), Expect(2) = 2e-07
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKLSG 144
+YLGMP+LH R ++ Y + K +KL G
Sbjct: 179 KYLGMPLLHSRVSQQTYQGILDKTDQKLLG 208
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 52.0 bits (123), Expect(2) = 3e-07
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = -3
Query: 159 KKAKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
K + WK + LS A RITL + +++IP Y MQ K+P ++ +E+EK+ R F+W
Sbjct: 205 KLSGWKQQCLSLAGRITLSKFVISSIPYYHMQYAKIPKTICDEIEKIQRGFVW 257
Score = 28.1 bits (61), Expect(2) = 3e-07
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKLSG 144
+YLG I GR+++ ++ + K+Q KLSG
Sbjct: 179 KYLGANITPGRTSRGHFNHIINKIQNKLSG 208
>gb|EOY24339.1| RNA-directed DNA polymerase (Reverse transcriptase),
Polynucleotidyl transferase, Ribonuclease H fold-like
protein [Theobroma cacao]
Length = 616
Score = 45.8 bits (107), Expect(2) = 3e-07
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = -3
Query: 159 KKAKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
K + WKA +LS A +TL++ ++TIP Y MQ V +P + +E+ + FLW
Sbjct: 76 KLSGWKAFSLSFAGILTLVKSVLSTIPYYVMQIVSIPLDSCKRMERYCQNFLW 128
Score = 34.3 bits (77), Expect(2) = 3e-07
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 230 YLGMPILHGRSTKALYDFLTVKVQKKLSG 144
YLG+P+ HGR + FL KV+ KLSG
Sbjct: 51 YLGVPLFHGRKRITSFKFLEDKVRSKLSG 79
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 56.6 bits (135), Expect(2) = 3e-07
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = -3
Query: 159 KKAKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
K + WKA +L+ A R L+Q ++AT+P+YTMQ + LP S E++K R FLW
Sbjct: 1311 KLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLW 1363
Score = 23.1 bits (48), Expect(2) = 3e-07
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 230 YLGMPILHGRSTKALYDFLTVKVQKKLS 147
YLG+P+L R ++ ++ + K++ KLS
Sbjct: 1286 YLGIPMLKERVSRNTFNAVIDKMRTKLS 1313
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 56.6 bits (135), Expect(2) = 3e-07
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = -3
Query: 159 KKAKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
K + WKA +L+ A R L+Q ++AT+P+YTMQ + LP S E++K R FLW
Sbjct: 779 KLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLW 831
Score = 23.1 bits (48), Expect(2) = 3e-07
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 230 YLGMPILHGRSTKALYDFLTVKVQKKLS 147
YLG+P+L R ++ ++ + K++ KLS
Sbjct: 754 YLGIPMLKERVSRNTFNAVIDKMRTKLS 781
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 56.6 bits (135), Expect(2) = 3e-07
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = -3
Query: 159 KKAKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
K + WKA +L+ A R L+Q ++AT+P+YTMQ + LP S E++K R FLW
Sbjct: 779 KLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLW 831
Score = 23.1 bits (48), Expect(2) = 3e-07
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 230 YLGMPILHGRSTKALYDFLTVKVQKKLS 147
YLG+P+L R ++ ++ + K++ KLS
Sbjct: 754 YLGIPMLKERVSRNTFNAVIDKMRTKLS 781
>gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao]
Length = 475
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = -3
Query: 153 AKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
+ WKA LS A R+TL++ + IPSY MQ V +P E++E R FLW
Sbjct: 297 SSWKASALSFAGRLTLVKSILLYIPSYAMQTVAIPEKTREKIEMHCRNFLW 347
Score = 30.0 bits (66), Expect(2) = 4e-07
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKLS 147
+YLG+P+L GR +L+ +L K+ +LS
Sbjct: 269 KYLGVPLLRGRKKYSLFKYLEEKICNRLS 297
>emb|CAN78815.1| hypothetical protein VITISV_041732 [Vitis vinifera]
Length = 781
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = -3
Query: 153 AKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
A+WK + +SK RITLI+ MA++P YTM ++P S+V+ LEK+ R FLW
Sbjct: 488 AQWKRQYISKGGRITLIKCTMASLPIYTMSLFRMPKSVVKRLEKIQRDFLW 538
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 53.5 bits (127), Expect(2) = 4e-07
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = -3
Query: 153 AKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
A WK R LS A R+TL + +++IP +TM + LP S ++ L+K++R FLW
Sbjct: 302 AGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLW 352
Score = 25.8 bits (55), Expect(2) = 4e-07
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKLSG 144
+YLGMP+L R K + + K+ +L+G
Sbjct: 274 KYLGMPVLQRRINKDTFGDILEKLTTRLAG 303
>ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296313 [Fragaria vesca
subsp. vesca]
Length = 449
Score = 48.5 bits (114), Expect(2) = 5e-07
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -3
Query: 147 WKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFL 4
WK++ LS R+TL+Q + IP Y MQ K +L ++L+KLNR F+
Sbjct: 348 WKSKVLSFVGRLTLVQSVTSAIPMYAMQTAKFHVNLCDKLDKLNRDFI 395
Score = 30.8 bits (68), Expect(2) = 5e-07
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -1
Query: 233 QYLGMPILHGRSTKALYDFLTVKVQKKL 150
+YLGMP+++ R K Y L KVQK+L
Sbjct: 318 KYLGMPLIYDRVNKCTYAGLFDKVQKRL 345
>emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]
Length = 2009
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = -3
Query: 153 AKWKARTLSKAARITLIQPAMATIPSYTMQKVKLPSSLVEELEKLNRKFLW 1
A+WK + LSK RITLI+ +A+IP Y M ++P S+V+ LEKL R FLW
Sbjct: 1689 ARWKRQYLSKGGRITLIKSTLASIPIYQMSIFRMPKSVVKRLEKLQRDFLW 1739