BLASTX nr result

ID: Rauwolfia21_contig00038283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00038283
         (726 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...    58   4e-06
emb|CBI28142.3| unnamed protein product [Vitis vinifera]               58   4e-06
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...    57   5e-06

>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 30/57 (52%), Positives = 37/57 (64%)
 Frame = +1

Query: 1   EDVRKVRRKMRGLRIKKSPGCSSIEVDSDIPEVNAGDAFHTAGKESQMMSASRSKPL 171
           EDV KVRRKM+ L +KK PGCSS+EV+  + E   GDA H   +E   M  S +KPL
Sbjct: 588 EDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPL 644


>emb|CBI28142.3| unnamed protein product [Vitis vinifera]
          Length = 571

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 30/57 (52%), Positives = 37/57 (64%)
 Frame = +1

Query: 1   EDVRKVRRKMRGLRIKKSPGCSSIEVDSDIPEVNAGDAFHTAGKESQMMSASRSKPL 171
           EDV KVRRKM+ L +KK PGCSS+EV+  + E   GDA H   +E   M  S +KPL
Sbjct: 497 EDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPL 553


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 31/57 (54%), Positives = 37/57 (64%)
 Frame = +1

Query: 1   EDVRKVRRKMRGLRIKKSPGCSSIEVDSDIPEVNAGDAFHTAGKESQMMSASRSKPL 171
           EDV KVRRKM+ L +KK+PGCSSIEVDS I E  +G   H   +E   M    +KPL
Sbjct: 593 EDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAKPL 649


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