BLASTX nr result
ID: Rauwolfia21_contig00037480
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00037480
(555 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus tri... 54 9e-12
gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii] 54 9e-12
gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|3408071... 54 9e-12
ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [... 54 9e-12
gb|AGW04559.1| hypothetical chloroplast protein [Eustegia minuta] 51 4e-11
gb|AEK78240.1| hypothetical chloroplast RF2 [Nepenthes alata] 52 2e-10
gb|AEK71487.1| hypothetical chloroplast RF2 [Ixerba brexioides] 49 2e-10
gb|AAB50536.1| ORF2280 gene homolog [Nepenthes alata] 52 2e-10
ref|XP_002893650.1| predicted protein [Arabidopsis lyrata subsp.... 50 2e-10
gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata] 54 3e-10
gb|AAB50330.1| ORF2280 gene homolog, partial (chloroplast) [Steg... 49 4e-10
gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum] 49 4e-10
ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata] gi|317... 49 4e-10
gb|ADD30894.1| putative RF2 protein [Gunnera manicata] gi|340807... 49 4e-10
gb|ABQ14849.1| Ycf2 [Itea virginica] 49 4e-10
gb|ABQ14908.1| Ycf2 [Pterostemon rotundifolius] 49 4e-10
gb|ADZ36356.1| hypothetical protein RF2 [Stewartia malacodendron] 49 4e-10
gb|ABQ14823.1| Ycf2 [Daphniphyllum sp. 205-82] 49 4e-10
ref|YP_567121.1| Ycf2 [Vitis vinifera] gi|91984056|ref|YP_567140... 49 4e-10
gb|AEK71879.1| hypothetical chloroplast RF2 [Myrothamnus flabell... 49 4e-10
>gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus trichostomus]
Length = 2294
Score = 53.5 bits (127), Expect(2) = 9e-12
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIPSEVEGFFKQQGAGSTTQSNDI
Sbjct: 274 EKIPSEVEGFFKQQGAGSTTQSNDI 298
Score = 42.0 bits (97), Expect(2) = 9e-12
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3
Query: 58 RNKWTISLQNNTQFHMWQF 2
RNKW ISLQN+ QFHMWQF
Sbjct: 307 RNKWAISLQNSAQFHMWQF 325
>gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii]
Length = 2279
Score = 53.5 bits (127), Expect(2) = 9e-12
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIPSEVEGFFKQQGAGSTTQSNDI
Sbjct: 273 EKIPSEVEGFFKQQGAGSTTQSNDI 297
Score = 42.0 bits (97), Expect(2) = 9e-12
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3
Query: 58 RNKWTISLQNNTQFHMWQF 2
RNKW ISLQN+ QFHMWQF
Sbjct: 306 RNKWAISLQNSAQFHMWQF 324
>gb|ADD30887.1| putative RF2 protein [Nerium oleander] gi|340807172|gb|AEK71765.1|
hypothetical chloroplast RF2 [Nerium oleander]
Length = 2278
Score = 53.5 bits (127), Expect(2) = 9e-12
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIPSEVEGFFKQQGAGSTTQSNDI
Sbjct: 273 EKIPSEVEGFFKQQGAGSTTQSNDI 297
Score = 42.0 bits (97), Expect(2) = 9e-12
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3
Query: 58 RNKWTISLQNNTQFHMWQF 2
RNKW ISLQN+ QFHMWQF
Sbjct: 306 RNKWAISLQNSAQFHMWQF 324
>ref|YP_008081309.1| hypothetical chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|511348399|ref|YP_008081328.1| hypothetical
chloroplast RF2 (chloroplast) [Catharanthus roseus]
gi|474452120|gb|AGI51188.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
gi|474452139|gb|AGI51207.1| hypothetical chloroplast RF2
(chloroplast) [Catharanthus roseus]
Length = 2273
Score = 53.5 bits (127), Expect(2) = 9e-12
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIPSEVEGFFKQQGAGSTTQSNDI
Sbjct: 273 EKIPSEVEGFFKQQGAGSTTQSNDI 297
Score = 42.0 bits (97), Expect(2) = 9e-12
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3
Query: 58 RNKWTISLQNNTQFHMWQF 2
RNKW ISLQN+ QFHMWQF
Sbjct: 306 RNKWAISLQNSAQFHMWQF 324
>gb|AGW04559.1| hypothetical chloroplast protein [Eustegia minuta]
Length = 2320
Score = 51.2 bits (121), Expect(2) = 4e-11
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIPSEVEGFFKQQGA STTQSNDI
Sbjct: 293 EKIPSEVEGFFKQQGAASTTQSNDI 317
Score = 42.0 bits (97), Expect(2) = 4e-11
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3
Query: 58 RNKWTISLQNNTQFHMWQF 2
RNKW ISLQN+ QFHMWQF
Sbjct: 326 RNKWAISLQNSAQFHMWQF 344
>gb|AEK78240.1| hypothetical chloroplast RF2 [Nepenthes alata]
Length = 2281
Score = 52.4 bits (124), Expect(2) = 2e-10
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1
Query: 147 CEKIPSEVEGFFKQQGAGSTTQSNDI 70
CEKIP EVEGFFKQQGAGST QSNDI
Sbjct: 272 CEKIPIEVEGFFKQQGAGSTIQSNDI 297
Score = 38.9 bits (89), Expect(2) = 2e-10
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQ+ QFHMWQF
Sbjct: 302 HLFSRNKWAISLQSCAQFHMWQF 324
>gb|AEK71487.1| hypothetical chloroplast RF2 [Ixerba brexioides]
Length = 2278
Score = 48.9 bits (115), Expect(2) = 2e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 272 EKIPIEVEGFFKQQGAGSTIQSNDI 296
Score = 42.4 bits (98), Expect(2) = 2e-10
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN+ QFHMWQF
Sbjct: 301 HLFSRNKWAISLQNSAQFHMWQF 323
>gb|AAB50536.1| ORF2280 gene homolog [Nepenthes alata]
Length = 182
Score = 52.4 bits (124), Expect(2) = 2e-10
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1
Query: 147 CEKIPSEVEGFFKQQGAGSTTQSNDI 70
CEKIP EVEGFFKQQGAGST QSNDI
Sbjct: 82 CEKIPIEVEGFFKQQGAGSTIQSNDI 107
Score = 38.9 bits (89), Expect(2) = 2e-10
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQ+ QFHMWQF
Sbjct: 112 HLFSRNKWAISLQSCAQFHMWQF 134
>ref|XP_002893650.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339492|gb|EFH69909.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 838
Score = 50.1 bits (118), Expect(2) = 2e-10
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP+EVEGFFKQQGAGST QSNDI
Sbjct: 273 EKIPNEVEGFFKQQGAGSTIQSNDI 297
Score = 40.8 bits (94), Expect(2) = 2e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 302 HLFSRNKWAISLQNCAQFHMWQF 324
>gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata]
Length = 2308
Score = 53.5 bits (127), Expect(2) = 3e-10
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIPSEVEGFFKQQGAGSTTQSNDI
Sbjct: 273 EKIPSEVEGFFKQQGAGSTTQSNDI 297
Score = 36.6 bits (83), Expect(2) = 3e-10
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3
Query: 58 RNKWTISLQNNTQFHMWQF 2
RNK ISLQN+ QFHMWQF
Sbjct: 306 RNKRAISLQNSAQFHMWQF 324
>gb|AAB50330.1| ORF2280 gene homolog, partial (chloroplast) [Stegnosperma
halimifolium]
Length = 182
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 83 EKIPIEVEGFFKQQGAGSTIQSNDI 107
Score = 41.2 bits (95), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW+ISLQN QFHMWQF
Sbjct: 112 HLFSRNKWSISLQNCAQFHMWQF 134
>gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum]
Length = 2316
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 273 EKIPIEVEGFFKQQGAGSTIQSNDI 297
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 302 HLFSRNKWAISLQNCAQFHMWQF 324
>ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata]
gi|317046232|ref|YP_004072521.1| Ycf2 protein
[Corynocarpus laevigata] gi|309252933|gb|ADO60353.1|
Ycf2 protein [Corynocarpus laevigata]
gi|309252949|gb|ADO60369.1| Ycf2 protein [Corynocarpus
laevigata]
Length = 2316
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 275 EKIPIEVEGFFKQQGAGSTIQSNDI 299
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 304 HLFSRNKWAISLQNCAQFHMWQF 326
>gb|ADD30894.1| putative RF2 protein [Gunnera manicata] gi|340807148|gb|AEK71744.1|
hypothetical chloroplast RF2 [Gunnera manicata]
Length = 2306
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 275 EKIPIEVEGFFKQQGAGSTIQSNDI 299
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 304 HLFSRNKWAISLQNCAQFHMWQF 326
>gb|ABQ14849.1| Ycf2 [Itea virginica]
Length = 2306
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 273 EKIPIEVEGFFKQQGAGSTIQSNDI 297
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 302 HLFSRNKWAISLQNCAQFHMWQF 324
>gb|ABQ14908.1| Ycf2 [Pterostemon rotundifolius]
Length = 2305
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 273 EKIPIEVEGFFKQQGAGSTIQSNDI 297
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 302 HLFSRNKWAISLQNCAQFHMWQF 324
>gb|ADZ36356.1| hypothetical protein RF2 [Stewartia malacodendron]
Length = 2304
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 275 EKIPIEVEGFFKQQGAGSTIQSNDI 299
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 304 HLFSRNKWAISLQNCAQFHMWQF 326
>gb|ABQ14823.1| Ycf2 [Daphniphyllum sp. 205-82]
Length = 2303
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 273 EKIPIEVEGFFKQQGAGSTIQSNDI 297
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 302 HLFSRNKWAISLQNCAQFHMWQF 324
>ref|YP_567121.1| Ycf2 [Vitis vinifera] gi|91984056|ref|YP_567140.1| Ycf2 [Vitis
vinifera] gi|122246606|sp|Q0ZIV6.1|YCF2_VITVI RecName:
Full=Protein Ycf2 gi|91701693|gb|ABE47577.1|
hypothetical chloroplast RF2 [Vitis vinifera]
gi|91701714|gb|ABE47598.1| hypothetical chloroplast RF2
[Vitis vinifera] gi|550533693|dbj|BAO01537.1| Ycf2
(chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533710|dbj|BAO01554.1| Ycf2 (chloroplast) [Vitis
vinifera subsp. caucasica] gi|550533779|dbj|BAO01621.1|
Ycf2 (chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533796|dbj|BAO01638.1| Ycf2 (chloroplast) [Vitis
vinifera subsp. caucasica] gi|550533864|dbj|BAO01705.1|
Ycf2 (chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533881|dbj|BAO01722.1| Ycf2 (chloroplast) [Vitis
vinifera subsp. caucasica]
Length = 2300
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 273 EKIPIEVEGFFKQQGAGSTIQSNDI 297
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 302 HLFSRNKWAISLQNCAQFHMWQF 324
>gb|AEK71879.1| hypothetical chloroplast RF2 [Myrothamnus flabellifolia]
Length = 2299
Score = 48.9 bits (115), Expect(2) = 4e-10
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1
Query: 144 EKIPSEVEGFFKQQGAGSTTQSNDI 70
EKIP EVEGFFKQQGAGST QSNDI
Sbjct: 273 EKIPIEVEGFFKQQGAGSTIQSNDI 297
Score = 40.8 bits (94), Expect(2) = 4e-10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3
Query: 70 YVSQRNKWTISLQNNTQFHMWQF 2
++ RNKW ISLQN QFHMWQF
Sbjct: 302 HLFSRNKWAISLQNCAQFHMWQF 324