BLASTX nr result
ID: Rauwolfia21_contig00037425
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00037425
(366 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 101 1e-34
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 100 3e-34
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 97 7e-33
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 97 7e-33
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 97 7e-33
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 97 3e-32
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 96 6e-32
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 96 6e-32
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 96 6e-32
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 96 6e-32
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 92 1e-31
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 96 1e-31
ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756... 96 1e-31
ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761... 96 1e-31
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 96 2e-31
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 95 5e-31
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 96 6e-31
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 89 6e-31
gb|ADB27476.1| gag-pol polyprotein [Bouteloua hirsuta subsp. pec... 93 1e-30
gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex] 91 1e-30
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 101 bits (252), Expect(2) = 1e-34
Identities = 51/66 (77%), Positives = 54/66 (81%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R + G DSI VVVDRFSKMAHFIPCHKTDDAI FFRE+VRLHGMP+TIVSD D
Sbjct: 1466 LPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTIVSDRDT 1525
Query: 193 KFLSYF 176
KFLSYF
Sbjct: 1526 KFLSYF 1531
Score = 70.5 bits (171), Expect(2) = 1e-34
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = -1
Query: 189 F*AIFWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYA 10
F + FW+ HPQTDGQTEVVNRTL TLLR L+ KNLK WE+ +P+
Sbjct: 1527 FLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHV 1586
Query: 9 EFA 1
EFA
Sbjct: 1587 EFA 1589
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 100 bits (249), Expect(2) = 3e-34
Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R + G DSI VVVDRFSKMAHFIPCHKTDDA+ FFRE+VRLHGMP+TIVSD D
Sbjct: 841 LPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAMHIANLFFREVVRLHGMPKTIVSDRDT 900
Query: 193 KFLSYF 176
KFLSYF
Sbjct: 901 KFLSYF 906
Score = 70.5 bits (171), Expect(2) = 3e-34
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = -1
Query: 189 F*AIFWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYA 10
F + FW+ HPQTDGQTEVVNRTL TLLR L+ KNLK WE+ +P+
Sbjct: 902 FLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHV 961
Query: 9 EFA 1
EFA
Sbjct: 962 EFA 964
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 97.1 bits (240), Expect(2) = 7e-33
Identities = 50/66 (75%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDA---IFFFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA FF EIVRLHGMP+TIVSD D
Sbjct: 1278 LPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDT 1337
Query: 193 KFLSYF 176
KFLSYF
Sbjct: 1338 KFLSYF 1343
Score = 69.3 bits (168), Expect(2) = 7e-33
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = -1
Query: 189 F*AIFWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYA 10
F + FW+ HPQTDGQTEVVNRTL LLR L+ KNLK WEE +P+
Sbjct: 1339 FLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHV 1398
Query: 9 EFA 1
EFA
Sbjct: 1399 EFA 1401
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 97.1 bits (240), Expect(2) = 7e-33
Identities = 50/66 (75%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDA---IFFFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA FF EIVRLHGMP+TIVSD D
Sbjct: 246 LPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDT 305
Query: 193 KFLSYF 176
KFLSYF
Sbjct: 306 KFLSYF 311
Score = 69.3 bits (168), Expect(2) = 7e-33
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = -1
Query: 189 F*AIFWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYA 10
F + FW+ HPQTDGQTEVVNRTL LLR L+ KNLK WEE +P+
Sbjct: 307 FLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHV 366
Query: 9 EFA 1
EFA
Sbjct: 367 EFA 369
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 97.1 bits (240), Expect(2) = 7e-33
Identities = 50/66 (75%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDA---IFFFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA FF EIVRLHGMP+TIVSD D
Sbjct: 246 LPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDT 305
Query: 193 KFLSYF 176
KFLSYF
Sbjct: 306 KFLSYF 311
Score = 69.3 bits (168), Expect(2) = 7e-33
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = -1
Query: 189 F*AIFWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYA 10
F + FW+ HPQTDGQTEVVNRTL LLR L+ KNLK WEE +P+
Sbjct: 307 FLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHV 366
Query: 9 EFA 1
EFA
Sbjct: 367 EFA 369
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 96.7 bits (239), Expect(2) = 3e-32
Identities = 50/66 (75%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHKTDDA FFREIVRLHG+P TIVSD D
Sbjct: 1275 LPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDT 1334
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 1335 KFLSHF 1340
Score = 67.4 bits (163), Expect(2) = 3e-32
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L KN+K WEE +P+ EFA
Sbjct: 1340 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFA 1398
Score = 55.1 bits (131), Expect(2) = 2e-13
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Frame = -3
Query: 352 KAGHDSILVVVDRFSKMAHFIPCHKT---DDAIFFFFREIVRLHGMPRTIVSDLDVKFLS 182
+ G+DSI VVVDR +K+A FIP T + +F IV LHG+P+ IVSD + +F S
Sbjct: 2101 QGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSDRESQFTS 2160
Query: 181 YF 176
+F
Sbjct: 2161 HF 2162
Score = 45.8 bits (107), Expect(2) = 2e-13
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW+ HPQTDGQTE +N+ L +L + K W++++PYAEF+
Sbjct: 2162 FWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFS 2220
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 95.5 bits (236), Expect(2) = 6e-32
Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA FFREIVRLHG+P TIVSD D
Sbjct: 1303 LPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDT 1362
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 1363 KFLSHF 1368
Score = 67.8 bits (164), Expect(2) = 6e-32
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L KN+K WEE +P+ EFA
Sbjct: 1368 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFA 1426
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 95.5 bits (236), Expect(2) = 6e-32
Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA FFREIVRLHG+P TIVSD D
Sbjct: 1303 LPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDT 1362
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 1363 KFLSHF 1368
Score = 67.8 bits (164), Expect(2) = 6e-32
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L KN+K WEE +P+ EFA
Sbjct: 1368 FWRTLWAKLGTKFLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFA 1426
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 95.5 bits (236), Expect(2) = 6e-32
Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA FFREIVRLHG+P TIVSD D
Sbjct: 1303 LPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDT 1362
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 1363 KFLSHF 1368
Score = 67.8 bits (164), Expect(2) = 6e-32
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L KN+K WEE +P+ EFA
Sbjct: 1368 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFA 1426
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 95.5 bits (236), Expect(2) = 6e-32
Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA FFREIVRLHG+P TIVSD D
Sbjct: 616 LPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDT 675
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 676 KFLSHF 681
Score = 67.8 bits (164), Expect(2) = 6e-32
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L KN+K WEE +P+ EFA
Sbjct: 681 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFA 739
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 92.4 bits (228), Expect(2) = 1e-31
Identities = 48/66 (72%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
LLR + G DSI VVVDRFSKM HFI CHKTDDA FFR+IVRLHG+PR+IVSD DV
Sbjct: 867 LLRSRNGRDSIFVVVDRFSKMTHFISCHKTDDATHIANLFFRKIVRLHGIPRSIVSDRDV 926
Query: 193 KFLSYF 176
KFLS F
Sbjct: 927 KFLSCF 932
Score = 70.1 bits (170), Expect(2) = 1e-31
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = -1
Query: 189 F*AIFWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYA 10
F + FW+ HPQTDGQ EVVNRTL TLLR ++ KNLKNWE+ +P+
Sbjct: 928 FLSCFWKVLWGKLGTKLLFSTTCHPQTDGQIEVVNRTLSTLLRTIIQKNLKNWEDCLPFT 987
Query: 9 EFA 1
EFA
Sbjct: 988 EFA 990
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 95.5 bits (236), Expect(2) = 1e-31
Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA FFREIVRLHG+P TIVSD D
Sbjct: 1199 LPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDT 1258
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 1259 KFLSHF 1264
Score = 66.6 bits (161), Expect(2) = 1e-31
Identities = 30/59 (50%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRT+ T+LR +L KN+K WEE +P+ EFA
Sbjct: 1264 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEECLPHVEFA 1322
>ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756049, partial [Setaria
italica]
Length = 763
Score = 95.9 bits (237), Expect(2) = 1e-31
Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDA---IFFFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHKTDDA FFREI+RLHG+P TIVSD D
Sbjct: 563 LPRTKKGRDSIFVVVDRFSKMAHFIPCHKTDDASNVAELFFREIIRLHGIPNTIVSDRDA 622
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 623 KFLSHF 628
Score = 66.2 bits (160), Expect(2) = 1e-31
Identities = 30/59 (50%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L K+LK WE+ +P+ EFA
Sbjct: 628 FWRSLWNKMGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLDKHLKRWEDCLPHVEFA 686
>ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761720, partial [Setaria
italica]
Length = 738
Score = 95.9 bits (237), Expect(2) = 1e-31
Identities = 49/66 (74%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDA---IFFFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHKTDDA FFREI+RLHG+P TIVSD D
Sbjct: 538 LPRTKKGRDSIFVVVDRFSKMAHFIPCHKTDDASNVAELFFREIIRLHGIPNTIVSDRDA 597
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 598 KFLSHF 603
Score = 66.2 bits (160), Expect(2) = 1e-31
Identities = 30/59 (50%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L K+LK WE+ +P+ EFA
Sbjct: 603 FWRSLWNKMGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLDKHLKRWEDCLPHVEFA 661
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 95.5 bits (236), Expect(2) = 2e-31
Identities = 48/66 (72%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R + G DS+ VVVDRFSKMAHFIPCHKTDDA FFREIVRLHG+P TIVSD D
Sbjct: 1278 LPRTRKGRDSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDA 1337
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 1338 KFLSHF 1343
Score = 66.2 bits (160), Expect(2) = 2e-31
Identities = 30/59 (50%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L KN+K WE+ +P+ EFA
Sbjct: 1343 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFA 1401
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 95.1 bits (235), Expect(2) = 5e-31
Identities = 49/66 (74%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKM HFIPCHKTDDA FFREIVRLHG+P TIVSD D
Sbjct: 1254 LPRTKRGRDSIFVVVDRFSKMVHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDT 1313
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 1314 KFLSHF 1319
Score = 65.1 bits (157), Expect(2) = 5e-31
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQ EVVNRTL T+LR +L KN+K WEE +P+ EFA
Sbjct: 1319 FWRTLWAKLGTKLLFSTTCHPQTDGQIEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFA 1377
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 95.9 bits (237), Expect(2) = 6e-31
Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDAI---FFFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA+ FFREI+RLHG+P TIVSD D
Sbjct: 1319 LPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAVNVADLFFREIIRLHGVPNTIVSDRDT 1378
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 1379 KFLSHF 1384
Score = 63.9 bits (154), Expect(2) = 6e-31
Identities = 30/59 (50%), Positives = 34/59 (57%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L N K WEE +P+ EFA
Sbjct: 1384 FWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFA 1442
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 89.4 bits (220), Expect(2) = 6e-31
Identities = 44/62 (70%), Positives = 49/62 (79%), Gaps = 3/62 (4%)
Frame = -3
Query: 352 KAGHDSILVVVDRFSKMAHFIPCHKTDDAIF---FFFREIVRLHGMPRTIVSDLDVKFLS 182
K G DS+ VVVDRFSKMAHFIPC K DDA FF+EIVRLHG+PR+IVSD D KFLS
Sbjct: 876 KNGKDSVFVVVDRFSKMAHFIPCKKVDDACHVADLFFKEIVRLHGLPRSIVSDRDAKFLS 935
Query: 181 YF 176
+F
Sbjct: 936 HF 937
Score = 70.5 bits (171), Expect(2) = 6e-31
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTLGTLLR +L KNLK+WE +P+ EFA
Sbjct: 937 FWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRTVLKKNLKSWEACLPHVEFA 995
>gb|ADB27476.1| gag-pol polyprotein [Bouteloua hirsuta subsp. pectinata]
Length = 227
Score = 93.2 bits (230), Expect(2) = 1e-30
Identities = 47/66 (71%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDA---IFFFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSK+AHFIPCHKTDDA FFREI+RLHG+P TIV+D D
Sbjct: 91 LPRTKKGRDSIFVVVDRFSKIAHFIPCHKTDDASNVAELFFREIIRLHGIPHTIVTDRDA 150
Query: 193 KFLSYF 176
KFLS+F
Sbjct: 151 KFLSHF 156
Score = 65.9 bits (159), Expect(2) = 1e-30
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L KNLK WE+ +P+ E A
Sbjct: 156 FWRSLWNKLGTKLLLSTTCHPQTDGQTEVVNRTLSTMLRAVLDKNLKRWEDCLPHVELA 214
>gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]
Length = 227
Score = 90.9 bits (224), Expect(2) = 1e-30
Identities = 46/66 (69%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Frame = -3
Query: 364 LLR*KAGHDSILVVVDRFSKMAHFIPCHKTDDA---IFFFFREIVRLHGMPRTIVSDLDV 194
L R K G DSI VVVDRFSKMAHFIPCHK+DDA FFRE++RLHG+P TIVSD D
Sbjct: 91 LPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATNIADLFFREVIRLHGVPTTIVSDRDA 150
Query: 193 KFLSYF 176
KF S+F
Sbjct: 151 KFPSHF 156
Score = 68.2 bits (165), Expect(2) = 1e-30
Identities = 32/59 (54%), Positives = 36/59 (61%)
Frame = -1
Query: 177 FWEXXXXXXXXXXXXXXXSHPQTDGQTEVVNRTLGTLLRVLLSKNLKNWEETIPYAEFA 1
FW HPQTDGQTEVVNRTL T+LR +L KNLK WEE +P+ EFA
Sbjct: 156 FWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNLKMWEECLPHIEFA 214