BLASTX nr result
ID: Rauwolfia21_contig00037216
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00037216
(820 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 265 2e-68
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 262 1e-67
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 262 1e-67
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 260 5e-67
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 254 3e-65
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus... 251 2e-64
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 251 2e-64
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s... 250 5e-64
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 249 8e-64
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 246 5e-63
gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, put... 246 9e-63
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 245 1e-62
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor... 241 3e-61
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 241 3e-61
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe... 240 5e-61
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 239 1e-60
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 231 2e-58
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 231 3e-58
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 230 5e-58
ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III s... 230 5e-58
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 265 bits (676), Expect = 2e-68
Identities = 135/239 (56%), Positives = 170/239 (71%), Gaps = 5/239 (2%)
Frame = -2
Query: 705 GMSRSGEGGLKRKRPGPDTLS----NADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVR 538
GMSRS LKRKRP +T S +A+ + ++IRSK DMGI RD+K + LPD+VV
Sbjct: 61 GMSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 120
Query: 537 KSLTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSIC 358
KSL L K L+KEV NIQ +G KHY+A + EPSKE+TGG +YV G LD ++I ILK C
Sbjct: 121 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 180
Query: 357 LELVRKKKVATVETAYEALAKQG-AVKDCTKELIAKILHALVLGSEIIEVKSTGLGEYHS 181
+ ++ K KVAT E E++ K G +C+ + IA+IL ALVL +EI+EV+S+G GE+ S
Sbjct: 181 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 240
Query: 180 VPIGAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
+PIGAVCYR N G G P IGAMASIPCG+CPRI QCTPDG+ISP+TC YY KWLD
Sbjct: 241 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 299
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 262 bits (670), Expect = 1e-67
Identities = 134/238 (56%), Positives = 169/238 (71%), Gaps = 5/238 (2%)
Frame = -2
Query: 702 MSRSGEGGLKRKRPGPDTLS----NADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRK 535
MSRS LKRKRP +T S +A+ + ++IRSK DMGI RD+K + LPD+VV K
Sbjct: 1 MSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTK 60
Query: 534 SLTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICL 355
SL L K L+KEV NIQ +G KHY+A + EPSKE+TGG +YV G LD ++I ILK C+
Sbjct: 61 SLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCV 120
Query: 354 ELVRKKKVATVETAYEALAKQG-AVKDCTKELIAKILHALVLGSEIIEVKSTGLGEYHSV 178
++ K KVAT E E++ K G +C+ + IA+IL ALVL +EI+EV+S+G GE+ S+
Sbjct: 121 RVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSI 180
Query: 177 PIGAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
PIGAVCYR N G G P IGAMASIPCG+CPRI QCTPDG+ISP+TC YY KWLD
Sbjct: 181 PIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 238
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 262 bits (670), Expect = 1e-67
Identities = 134/238 (56%), Positives = 169/238 (71%), Gaps = 5/238 (2%)
Frame = -2
Query: 702 MSRSGEGGLKRKRPGPDTLS----NADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRK 535
MSRS LKRKRP +T S +A+ + ++IRSK DMGI RD+K + LPD+VV K
Sbjct: 1 MSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTK 60
Query: 534 SLTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICL 355
SL L K L+KEV NIQ +G KHY+A + EPSKE+TGG +YV G LD ++I ILK C+
Sbjct: 61 SLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCV 120
Query: 354 ELVRKKKVATVETAYEALAKQG-AVKDCTKELIAKILHALVLGSEIIEVKSTGLGEYHSV 178
++ K KVAT E E++ K G +C+ + IA+IL ALVL +EI+EV+S+G GE+ S+
Sbjct: 121 RVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSI 180
Query: 177 PIGAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
PIGAVCYR N G G P IGAMASIPCG+CPRI QCTPDG+ISP+TC YY KWLD
Sbjct: 181 PIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 238
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 260 bits (664), Expect = 5e-67
Identities = 133/238 (55%), Positives = 170/238 (71%), Gaps = 5/238 (2%)
Frame = -2
Query: 702 MSRSGEGGLKRKRPGPDTLS----NADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRK 535
MSRS LKRKRP + S +A+ + ++IRSK DMGI RD+K + LPD+VV K
Sbjct: 1 MSRSQGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTK 60
Query: 534 SLTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICL 355
SL L K L+KEV NIQ +G KHY+A + EPSKE+TGG +YV G LD ++I ILK C+
Sbjct: 61 SLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCV 120
Query: 354 ELVRKKKVATVETAYEALAKQG-AVKDCTKELIAKILHALVLGSEIIEVKSTGLGEYHSV 178
+++ K KVAT E E++ K G +C+ + IA+IL ALVL +EI+EV+S+G GE+ S+
Sbjct: 121 KVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSI 180
Query: 177 PIGAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
PIGAVCYR N G G PKIGAMASIPCG+CPRI QCTPDG+ISP++C YY KWLD
Sbjct: 181 PIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLD 238
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform 1 [Solanum lycopersicum]
gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like isoform 2 [Solanum
lycopersicum]
Length = 237
Score = 254 bits (649), Expect = 3e-65
Identities = 129/237 (54%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Frame = -2
Query: 702 MSRSGEGG-LKRKRPGPDT--LSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRKS 532
MSRS E LKRKRP T L +A+L VLNV++SK + G+ V DVK + + ++V K
Sbjct: 1 MSRSSEAAALKRKRPDSSTQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVDKC 60
Query: 531 LTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLE 352
LT LV KNL+K+V +IQ + K+Y+A + EPS+E+TGG +Y G+LDK+FI +L+ CL+
Sbjct: 61 LTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCLK 120
Query: 351 LVRKKKVATVETAYEALAKQGAVKDCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVPI 172
++ KVATVE ++ L K+ V+ CT + + +IL+++VL IIEVKSTGLGEYHS+PI
Sbjct: 121 VIGMMKVATVEGIHDFLKKRKVVECCTSQQVGEILNSMVLDDSIIEVKSTGLGEYHSIPI 180
Query: 171 GAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLDI 1
G+VCYRIA G G IG MASIPCG CPRI CTPDG+ISP+TCVY+ KWLDI
Sbjct: 181 GSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLDI 235
>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 251 bits (642), Expect = 2e-64
Identities = 128/230 (55%), Positives = 165/230 (71%), Gaps = 5/230 (2%)
Frame = -2
Query: 678 LKRKRPG----PDTLSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRKSLTLLVSK 511
LKRKR ++++ + + N+I SK DMGI D+K + LPDS+V+KSL LL SK
Sbjct: 10 LKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKLLQSK 69
Query: 510 NLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLELVRKKKV 331
NL+KEV NIQ +G KHY+AA+ EPSKEITGG++Y G LD DFI+++K +CL+ + ++KV
Sbjct: 70 NLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKCIFRQKV 129
Query: 330 ATVETAYEALAKQGA-VKDCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVPIGAVCYR 154
AT + E K G + T + I +IL ALVL EI EVKSTGLG++ SVP+G +CYR
Sbjct: 130 ATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPVGRICYR 189
Query: 153 IANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
G N+G+ K GAMASIPCG+CPRI CTPDG+ISPRTCVYYQKWLD
Sbjct: 190 -CKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLD 238
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Glycine max]
Length = 239
Score = 251 bits (642), Expect = 2e-64
Identities = 128/234 (54%), Positives = 164/234 (70%), Gaps = 5/234 (2%)
Frame = -2
Query: 690 GEGGLKRKRPG----PDTLSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRKSLTL 523
G LKRKR +L++ + + N+I SK DMGI D+K + LPDS+V+KSL L
Sbjct: 6 GSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKL 65
Query: 522 LVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLELVR 343
L SKNL+KEV NIQ +G KHY+AA+ EPSKEITGG +Y G LD DFI+++K +CL+ +
Sbjct: 66 LQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIF 125
Query: 342 KKKVATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVPIGA 166
++KVAT + E K G + T + I +IL LVL EI+EVKSTG G++ SVP+G
Sbjct: 126 RQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPVGR 185
Query: 165 VCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
+CYR G N+G+ K GAMASIPCG+CPRI CTPDG+ISPRTCVYYQKWLD
Sbjct: 186 ICYR-CKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLD 238
>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Solanum tuberosum]
Length = 237
Score = 250 bits (638), Expect = 5e-64
Identities = 126/237 (53%), Positives = 169/237 (71%), Gaps = 3/237 (1%)
Frame = -2
Query: 702 MSRSGEGG-LKRKRPGPDT--LSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRKS 532
MSRS E +KRKR T L +A+ VLNV++SK ++G+ V DVK + + ++V K
Sbjct: 1 MSRSSEAAAMKRKRLDSSTQGLVDAEFVVLNVVKSKKNLGVWVADVKKEANIAPALVDKC 60
Query: 531 LTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLE 352
LT LV KNL+K+V IQ + KHY+A + EPS+E+TGG +Y G+LDK+FI +L+ CL+
Sbjct: 61 LTSLVKKNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCLK 120
Query: 351 LVRKKKVATVETAYEALAKQGAVKDCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVPI 172
++ KVATVE ++ L K+ V+ CT + + +IL+++VL IIEVKSTGLGEYHS+PI
Sbjct: 121 VIGMMKVATVEGIHDFLKKRKVVECCTSQQVGEILNSMVLDDAIIEVKSTGLGEYHSIPI 180
Query: 171 GAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLDI 1
G+ CYRIA G+ G IG MASIPCG CPRI CTPDG+ISP+TCVYY KWL+I
Sbjct: 181 GSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYTKWLNI 235
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 249 bits (636), Expect = 8e-64
Identities = 129/235 (54%), Positives = 168/235 (71%), Gaps = 5/235 (2%)
Frame = -2
Query: 708 IGMSRSGEGGLKRKRPGPDTLS----NADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVV 541
+GMSRS LKRKRP + S +A+ + ++IRSK DMGI RD+K + LPD+VV
Sbjct: 89 LGMSRSQGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 148
Query: 540 RKSLTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSI 361
KSL L K L+KEV NIQ +G KHY+A + EPSKE+TGG +YV G LD ++I ILK
Sbjct: 149 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 208
Query: 360 CLELVRKKKVATVETAYEALAKQG-AVKDCTKELIAKILHALVLGSEIIEVKSTGLGEYH 184
C++++ K KVAT E E++ K G +C+ + IA+IL ALVL +EI+EV+S+G GE+
Sbjct: 209 CVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 268
Query: 183 SVPIGAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYY 19
S+PIGAVCYR N G G PKIGAMASIPCG+CPRI QCTPDG+ISP++ V+Y
Sbjct: 269 SIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSSVHY 323
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 246 bits (629), Expect = 5e-63
Identities = 125/230 (54%), Positives = 165/230 (71%), Gaps = 5/230 (2%)
Frame = -2
Query: 678 LKRKRPGPDT----LSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRKSLTLLVSK 511
LKRK+P + L+ + + NVI SK DMGI RD+K + LPD+VV KSL +L +K
Sbjct: 7 LKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQAK 66
Query: 510 NLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLELVRKKKV 331
NL+KEV NIQ +G KHY+A + EPSKEITGG +YV G LD +FI +LK +C + V K KV
Sbjct: 67 NLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLKV 126
Query: 330 ATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVPIGAVCYR 154
AT+E +++ + G + TK+ I +I+ ALVL + +IEVKS G+ E+ +PIG VCY+
Sbjct: 127 ATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCYK 186
Query: 153 IANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
G G+ G+P+IGAMASIPCG+CPRI QCTPDG+ISP+TCVYY KWLD
Sbjct: 187 CV-GKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLD 235
>gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 246 bits (627), Expect = 9e-63
Identities = 123/237 (51%), Positives = 171/237 (72%), Gaps = 4/237 (1%)
Frame = -2
Query: 702 MSR-SGEGGLKRKRPGP--DTLSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRKS 532
MSR G LKRKRPG D+L+ + V +VI+ K DMGI+ RD+K +I LPD++V K
Sbjct: 1 MSRLQGPNALKRKRPGATSDSLTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVTKC 60
Query: 531 LTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLE 352
L L++KNL+KEVKNIQ RG KH+++A+ EPS EITGG +YV G LD ++I++LK C
Sbjct: 61 LKSLLAKNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCWR 120
Query: 351 LVRKKKVATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVP 175
+ KVAT+E +A+ + + + +K+ I +I+ ALVL +E++EVKS+G GE+ S+P
Sbjct: 121 KIYGLKVATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASIP 180
Query: 174 IGAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
+G VCY+ G G+PK+G MASIPCG+CP+I CTPDG+ISP+TCVYY+KWLD
Sbjct: 181 VGKVCYKCIGKRGYG-GEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWLD 236
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 245 bits (626), Expect = 1e-62
Identities = 135/271 (49%), Positives = 179/271 (66%), Gaps = 7/271 (2%)
Frame = -2
Query: 795 CFFLFNGIGLRTSVDKKIFQLLLAYSRRRIGMSR-SGEGGLKRKRPGPDT----LSNADL 631
C LF+ LR V L + +GMSR G LKRKRP ++ L+ +
Sbjct: 24 CRCLFSSFDLR--VPAYCTGCLFRFDVLSVGMSRVQGPSSLKRKRPELNSPVQSLTEHER 81
Query: 630 AVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRKSLTLLVSKNLVKEVKNIQKRGIKHYVAA 451
+ +VIRSK D+GI RD+K + KLPD+VV KSL L KNL+KEV NIQ +G KH++A
Sbjct: 82 ILYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSLKALRVKNLIKEVVNIQNKGRKHFMAT 141
Query: 450 DIEPSKEITGGEFYVNGELDKDFIDILKSICLELVRKKKVATVETAYEALAKQGAVK-DC 274
+ EPSKEI+GG +Y+ G LD +FI+ L+ +C + KK VAT+E +++ A D
Sbjct: 142 EFEPSKEISGGAWYLEGSLDTEFIESLRQLCKRQIEKKGVATLEEVTDSINSYPAFNVDV 201
Query: 273 TKELIAKILHALVLGSEIIEVKSTGLGEYHSVPIGAVCYR-IANGAGNNKGDPKIGAMAS 97
TK+ I +IL L+L + I+EVKS G+GE+ S+P G VCYR I+ GA G+PK GA+AS
Sbjct: 202 TKQQIEEILRTLILDNAIMEVKSNGMGEFASIPFGKVCYRYISKGALG--GEPKAGALAS 259
Query: 96 IPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
IPCG+CPRI CTPDG+ISP+TCVYYQKWLD
Sbjct: 260 IPCGVCPRISHCTPDGIISPKTCVYYQKWLD 290
>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
Length = 238
Score = 241 bits (614), Expect = 3e-61
Identities = 124/239 (51%), Positives = 171/239 (71%), Gaps = 6/239 (2%)
Frame = -2
Query: 702 MSRSGE-GGLKRKRPGP----DTLSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVR 538
MSR E LKRK+P D+L+ + + NVIRSK DMGI ++D+K K+PD+V
Sbjct: 1 MSRLQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVAN 60
Query: 537 KSLTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSIC 358
K+L L +K L+KEV NIQKRG KHYVAA+ EP+ EITGG +Y NG++D I+ILK C
Sbjct: 61 KALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQC 120
Query: 357 LELVRKKKVATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLGEYHS 181
L+ + K++VAT+E +A+ K G + T I +++ ALVL +E++EVKS G+GE+ S
Sbjct: 121 LKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFDS 180
Query: 180 VPIGAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
+P+G VCY+ + + ++GDPKIGAM+SIPCG+CPRI CTPDG+ISP+TC YY +WLD
Sbjct: 181 IPVGKVCYK--STSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWLD 237
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 241 bits (614), Expect = 3e-61
Identities = 125/231 (54%), Positives = 166/231 (71%), Gaps = 5/231 (2%)
Frame = -2
Query: 681 GLKRKRP----GPDTLSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRKSLTLLVS 514
G KRK+P +L+ + A+ N IRSK DMGI RD+K + LPD+VV KSL +L +
Sbjct: 6 GQKRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQA 65
Query: 513 KNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLELVRKKK 334
KNL+KEV NIQ +G K+Y+A + EPSKEITGG +YV G LD FI +LK C + + K K
Sbjct: 66 KNLIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLK 125
Query: 333 VATVETAYEALAKQG-AVKDCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVPIGAVCY 157
VATVE + + + G + TK+ I +IL ALVL +++ EVKS G+GE+ S+P+G VCY
Sbjct: 126 VATVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCY 185
Query: 156 RIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
+ + G G++ GDPKIGAMASIPCG+CPRI CTP+G+ISP+TCVYY KWL+
Sbjct: 186 K-SIGKGSS-GDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLE 234
>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 240 bits (612), Expect = 5e-61
Identities = 122/235 (51%), Positives = 165/235 (70%), Gaps = 5/235 (2%)
Frame = -2
Query: 693 SGEGGLKRKRPGP----DTLSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVRKSLT 526
S LKRK+P ++L+ + V +VIRSK DMGI RD+K + LPD++V KS+
Sbjct: 2 SRPSALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIK 61
Query: 525 LLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLELV 346
L +KNL+KEV N+Q +G KHY+AA+ EPSKE+TGG++Y NG LDK +I +K +++
Sbjct: 62 SLQAKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKII 121
Query: 345 RKKKVATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVPIG 169
+ KVAT+E + + K G K TK+ I +IL LVL + EVKSTG+GE+ S P+G
Sbjct: 122 YQLKVATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVG 181
Query: 168 AVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
VCY+ + G +K +PK+GAMASIPCG+CPRI QCTPDG+ISPRTCVY+ KWLD
Sbjct: 182 KVCYK-STSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLD 235
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 239 bits (609), Expect = 1e-60
Identities = 123/239 (51%), Positives = 166/239 (69%), Gaps = 6/239 (2%)
Frame = -2
Query: 702 MSR-SGEGGLKRKRPGPDT----LSNADLAVLNVIRSKGDMGIAVRDVKLDIKLPDSVVR 538
MSR G LKRKRP ++ L+ + + +VIRSK D+GI RD+K + KLPD+VV
Sbjct: 1 MSRLQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60
Query: 537 KSLTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSIC 358
KSL L K L+KEV NIQ +G KH++A + EPSKEI+GG +Y+ G LD +FI+ LK +C
Sbjct: 61 KSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLC 120
Query: 357 LELVRKKKVATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLGEYHS 181
+ ++ VAT+E +++ A D TK+ I +IL L+L + I+EVKS G+GE+ S
Sbjct: 121 KRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFAS 180
Query: 180 VPIGAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
+P G VCY+ + G G+PK GA+ASIPCG+CPRI QCTPDG+ISP+TCVYYQKWLD
Sbjct: 181 IPFGEVCYKYISKVGLG-GEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLD 238
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
Length = 233
Score = 231 bits (589), Expect = 2e-58
Identities = 119/232 (51%), Positives = 167/232 (71%), Gaps = 8/232 (3%)
Frame = -2
Query: 675 KRKRPGP----DTLSNADLAVLNVIRSKGDMGIAVRDVK--LDIKLPDSVVRKSLTLLVS 514
KRKRP D+L++ + + +VIRSK DMGI RD+K L + LPD++V KS+ L +
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 513 KNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLELVRKKK 334
K+L+KEV NI +G KH +A + EPSKEI+GG +Y G LD +FI ++KS CL+ + K K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 333 VATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVPIGAVCY 157
VAT+E +++ + GA K D TK+ I +I+ ALVL ++I+EVKS G GE+ ++P+G VCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 156 R-IANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
+ ++ G G G+PK G++ASIPCG+CP+I C PDGVISP+TCVYY KWLD
Sbjct: 183 KNVSKGGGG--GEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLD 232
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 231 bits (588), Expect = 3e-58
Identities = 119/232 (51%), Positives = 167/232 (71%), Gaps = 8/232 (3%)
Frame = -2
Query: 675 KRKRPGP----DTLSNADLAVLNVIRSKGDMGIAVRDVK--LDIKLPDSVVRKSLTLLVS 514
KRKRP D+L++ + + +VIRSK DMGI RD+K L + LPD++V KS+ L +
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 513 KNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLELVRKKK 334
K+L+KEV NI +G KH +A + EPSKEI+GG +Y G LD +FI ++KS CL+ + K K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 333 VATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVPIGAVCY 157
VAT+E +++ + GA K D TK+ I +I+ ALVL ++I+EVKS G GE+ ++P+G VCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 156 R-IANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
+ ++ G G G+PK G++ASIPCG+CP+I CTPDGVISP+TCVYY WLD
Sbjct: 183 KNVSKGGGG--GEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLD 232
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 230 bits (586), Expect = 5e-58
Identities = 121/244 (49%), Positives = 175/244 (71%), Gaps = 9/244 (3%)
Frame = -2
Query: 708 IGMSRSGEGGLKRKRPGP----DTLSNADLAVLNVIRS-KGDMGIAVRDVKLDIK--LPD 550
+G+++ G G KRKRP D+L++ + + +VIRS K DMGI RD+K ++K LPD
Sbjct: 11 LGLAK-GSGMSKRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPD 69
Query: 549 SVVRKSLTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDIL 370
++V KS+ L +K+L+KEV NI +G KH +A + EPSKEI+GG +Y G LD +FI ++
Sbjct: 70 NIVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVV 129
Query: 369 KSICLELVRKKKVATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLG 193
KS CL+ + K KVAT+E +++ + GA K D TK+ I +I+ A+VL ++I+EVKS G G
Sbjct: 130 KSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSG 189
Query: 192 EYHSVPIGAVCYR-IANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQ 16
E+ ++P+G VCY+ ++ G G G+PK G+ AS+PCG+CP+I CTPDGVISP+TCVYY
Sbjct: 190 EFTNIPVGKVCYKNVSKGGGG--GEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYT 247
Query: 15 KWLD 4
KWLD
Sbjct: 248 KWLD 251
>ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Cucumis sativus] gi|449506569|ref|XP_004162785.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like [Cucumis sativus]
Length = 243
Score = 230 bits (586), Expect = 5e-58
Identities = 113/237 (47%), Positives = 164/237 (69%), Gaps = 8/237 (3%)
Frame = -2
Query: 690 GEGGLKRKRPGPDTLSNADLAVL-------NVIRSKGDMGIAVRDVKLDIKLPDSVVRKS 532
G LKRKRP T +++ A++ ++I SK MGI D+K + K +SVV KS
Sbjct: 6 GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKS 65
Query: 531 LTLLVSKNLVKEVKNIQKRGIKHYVAADIEPSKEITGGEFYVNGELDKDFIDILKSICLE 352
L L +K L+K V++ Q +G K Y++ D EP+KE+TGG +Y +GELDKD+I+ LK +C
Sbjct: 66 LKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCAR 125
Query: 351 LVRKKKVATVETAYEALAKQGAVK-DCTKELIAKILHALVLGSEIIEVKSTGLGEYHSVP 175
++++KK+ T+E E+ + GA K + ++E I +I++ALVL ++++EVKS+G GE+ +P
Sbjct: 126 MIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIP 185
Query: 174 IGAVCYRIANGAGNNKGDPKIGAMASIPCGMCPRIGQCTPDGVISPRTCVYYQKWLD 4
IG +CY+ G KG+PK GAMASIPCG+CPRI CTP+G+ISP TCVYY KWLD
Sbjct: 186 IGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLD 242