BLASTX nr result

ID: Rauwolfia21_contig00037208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00037208
         (479 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306345.2| hypothetical protein POPTR_0005s08510g [Popu...    77   2e-12
ref|XP_006493850.1| PREDICTED: nuclear transcription factor Y su...    77   2e-12
ref|XP_006428057.1| hypothetical protein CICLE_v10027508mg, part...    77   2e-12
ref|XP_002528664.1| ccaat-binding transcription factor subunit A...    75   8e-12
emb|CBI21496.3| unnamed protein product [Vitis vinifera]               75   1e-11
ref|XP_002276300.1| PREDICTED: nuclear transcription factor Y su...    75   1e-11
gb|EXB80825.1| Nuclear transcription factor Y subunit B-3 [Morus...    73   3e-11
gb|ADM89632.1| nuclear transcription factor Y-alpha [Populus eup...    70   2e-10
gb|AGE10680.1| nuclear transcription factor YB7 [Populus nigra x...    70   4e-10
gb|ESW31748.1| hypothetical protein PHAVU_002G264300g [Phaseolus...    67   2e-09
ref|XP_004304851.1| PREDICTED: nuclear transcription factor Y su...    63   4e-08
ref|XP_002310018.2| hypothetical protein POPTR_0007s06480g [Popu...    62   8e-08
ref|XP_003524282.1| PREDICTED: nuclear transcription factor Y su...    56   4e-06

>ref|XP_002306345.2| hypothetical protein POPTR_0005s08510g [Populus trichocarpa]
           gi|550338407|gb|EEE93341.2| hypothetical protein
           POPTR_0005s08510g [Populus trichocarpa]
          Length = 224

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHLPIPTNSSTNNLGKLSKVSDSNSD-----HFQSSRN 314
           LKVYLNKYRE EGEK SMAR+ED L  PTN  T    + +KV+ + +D       QS  N
Sbjct: 107 LKVYLNKYRETEGEKNSMARQEDQLS-PTNHGTVGTHETNKVNGTLTDPSTEMDLQSFNN 165

Query: 313 GYYSLGGAKMTPNNYGDPGRAFGYGDHIITGAFN 212
           G YSL G ++T  +YG+  R  GY ++ + G FN
Sbjct: 166 GLYSL-GTEVTAKSYGENTRLLGYQENFMAGDFN 198


>ref|XP_006493850.1| PREDICTED: nuclear transcription factor Y subunit B-3-like [Citrus
           sinensis]
          Length = 221

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHL--PIPTNSSTNNLGKL--SKVSDSNSDHFQSSRNG 311
           LK+YLNKYRE EGEK SMAR+ED    P P++++   + K   S  S  N   FQ+   G
Sbjct: 103 LKIYLNKYRETEGEKNSMARQEDQAANPNPSHAAAAEINKANNSFSSSDNKADFQNFNMG 162

Query: 310 YYSLGGAKMTPNNYGDPGRAFGYGDHIITGAFN 212
           +YSL GA++ PN+ G+  R  GYG+++   AFN
Sbjct: 163 FYSL-GAQVAPNSNGEGTRVMGYGENLGVEAFN 194


>ref|XP_006428057.1| hypothetical protein CICLE_v10027508mg, partial [Citrus clementina]
           gi|557530047|gb|ESR41297.1| hypothetical protein
           CICLE_v10027508mg, partial [Citrus clementina]
          Length = 226

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHL--PIPTNSSTNNLGKL--SKVSDSNSDHFQSSRNG 311
           LK+YLNKYRE EGEK SMAR+ED    P P++++   + K   S  S  N   FQ+   G
Sbjct: 98  LKIYLNKYRETEGEKNSMARQEDQAANPNPSHAAAAEINKANNSFSSSDNKADFQNFNMG 157

Query: 310 YYSLGGAKMTPNNYGDPGRAFGYGDHIITGAFN 212
           +YSL GA++ PN+ G+  R  GYG+++   AFN
Sbjct: 158 FYSL-GAQVAPNSNGEGTRVMGYGENLGVEAFN 189


>ref|XP_002528664.1| ccaat-binding transcription factor subunit A, putative [Ricinus
           communis] gi|223531887|gb|EEF33703.1| ccaat-binding
           transcription factor subunit A, putative [Ricinus
           communis]
          Length = 220

 Score = 74.7 bits (182), Expect(2) = 8e-12
 Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHLPIPTNSSTNNLGKLSKVSDSNSDHFQ--SSRNGYY 305
           LKVYLNKYRE EGEK SMAR ++  P PT +  N L   S  +D +    Q  +   G+Y
Sbjct: 103 LKVYLNKYRETEGEKNSMARHDEQSPPPT-TEINKLNDSSLPTDHHHVEVQGFNCTTGFY 161

Query: 304 SLGGAKMTPNNYGDP-GRAFGYGDHIITGA----FNNI-GNITEIEGSANRVIATNL 152
           SL G+++T  +YGD   R+ GYG+++++GA    FN I GN    +G+ NR +A  L
Sbjct: 162 SL-GSQVTNKSYGDNYTRSVGYGENLVSGAGGFNFNKIRGN---GDGNGNRAVAAQL 214



 Score = 20.8 bits (42), Expect(2) = 8e-12
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -3

Query: 150 HHGVEW 133
           HHGVEW
Sbjct: 215 HHGVEW 220


>emb|CBI21496.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTS-MAREEDHLPIPTNSSTNNLGKLSKVSDSNSDHFQSSRNGYYS 302
           LKVYL+KYRE EGEK + +AR ED   +    ++N + K +K    + D FQ    G+YS
Sbjct: 186 LKVYLSKYRETEGEKNNVVARHEDQSAV---FNSNQMNKANKSIPIDPD-FQGFNGGFYS 241

Query: 301 LGGAKMTPNNYGD-PGRAFGYGDHIITGAFNNIGNITEIEGSANRVIATNLSP 146
           LG     P   GD    A GYGD ++TGAFN    I E +G+ NR++A+  SP
Sbjct: 242 LG-----PQMNGDEAAAAMGYGDSLVTGAFNR-SRIRENDGNGNRIMASYSSP 288


>ref|XP_002276300.1| PREDICTED: nuclear transcription factor Y subunit B-3-like [Vitis
           vinifera]
          Length = 208

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTS-MAREEDHLPIPTNSSTNNLGKLSKVSDSNSDHFQSSRNGYYS 302
           LKVYL+KYRE EGEK + +AR ED   +    ++N + K +K    + D FQ    G+YS
Sbjct: 103 LKVYLSKYRETEGEKNNVVARHEDQSAV---FNSNQMNKANKSIPIDPD-FQGFNGGFYS 158

Query: 301 LGGAKMTPNNYGD-PGRAFGYGDHIITGAFNNIGNITEIEGSANRVIATNLSP 146
           LG     P   GD    A GYGD ++TGAFN    I E +G+ NR++A+  SP
Sbjct: 159 LG-----PQMNGDEAAAAMGYGDSLVTGAFNR-SRIRENDGNGNRIMASYSSP 205


>gb|EXB80825.1| Nuclear transcription factor Y subunit B-3 [Morus notabilis]
          Length = 254

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 27/136 (19%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHLPIPTNSSTN----------------NLGKLSKVSD 347
           LKVYLNKYRE EGEK  M+R+EDH    TN++T+                N+   +K S+
Sbjct: 113 LKVYLNKYREVEGEKNFMSRQEDHHSPTTNTTTSSNHGPHHHDHDYHQMVNINNNNKGSN 172

Query: 346 S----NSDHFQS-SRNGYYSLGGAKMTPNNYGD--PGRAFGYG-DHIITGAFNNIGNITE 191
           S    N   FQ  +  G++SLGG    P +Y +   G  FGYG D+ ++G  N   N+T 
Sbjct: 173 SVPLINKVDFQDFNSGGFHSLGGQMNVPKSYEEVSNGMVFGYGSDNYVSGISNYNVNVTH 232

Query: 190 I---EGSANRVIATNL 152
               +G+ANRV+A +L
Sbjct: 233 ESGGDGNANRVMAAHL 248


>gb|ADM89632.1| nuclear transcription factor Y-alpha [Populus euphratica]
          Length = 223

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/93 (47%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHLPIPTNSSTNNLGKLSKVSDSNS----DHFQSSRNG 311
           LKVYLNKYR+ EGEK SMAR+EDHL  PTN  +    +  KV+ S S       QS   G
Sbjct: 107 LKVYLNKYRDTEGEKNSMARQEDHLS-PTNHGSLGTHETIKVNGSPSLSTGMDLQSFNAG 165

Query: 310 YYSLGGAKMTPNNYGDPGRAFGYGDHIITGAFN 212
            YSL G ++T  +YG   R  GY +  + G FN
Sbjct: 166 LYSL-GTEVTAKSYGQNTRFLGYQESSMVGDFN 197


>gb|AGE10680.1| nuclear transcription factor YB7 [Populus nigra x Populus x
           canadensis]
          Length = 223

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 43/93 (46%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHLPIPTNSSTNNLGKLSKVSDSNS----DHFQSSRNG 311
           LKVYLNKYR+ EGEK SMAR+ED L  PTN  +    +  KV+ S S       QS   G
Sbjct: 107 LKVYLNKYRDTEGEKNSMARQEDQLS-PTNHGSLGTHETIKVNGSPSLSTGMDLQSFNAG 165

Query: 310 YYSLGGAKMTPNNYGDPGRAFGYGDHIITGAFN 212
            YSL G ++T  +YG   R  GY ++++ G FN
Sbjct: 166 LYSL-GTEVTAKSYGQNTRFLGYQENLMVGDFN 197


>gb|ESW31748.1| hypothetical protein PHAVU_002G264300g [Phaseolus vulgaris]
          Length = 225

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHLPI----PTNSSTNNLGKLSKVSDSNSDHFQSSRNG 311
           LK+YL+ YRE EGEK+SMA++E+H P      TN   + L KL     + +D F +   G
Sbjct: 108 LKLYLHNYRETEGEKSSMAKQEEHSPTDQTHQTNDGVSELNKLPHSVTTKAD-FNTFSGG 166

Query: 310 YYSLGGAKMTPNNYGDPGRAFGYGDHIITGAFNNIGNITEIEGSANRVIATNL 152
           +YS+G     P  + D G   GY D  +           + + S NR++  NL
Sbjct: 167 FYSVGSRVTAPKTFTDIGGINGYRDSSMNSIIAQSAVSGDQDASGNRLMPPNL 219


>ref|XP_004304851.1| PREDICTED: nuclear transcription factor Y subunit B-3-like
           [Fragaria vesca subsp. vesca]
          Length = 217

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAR---EEDHLPIPTNSSTNNLGKLSKVSD------SNSDHFQ 326
           LK YLNKYRE EGEK SMAR   ++DH     +   NN  +L   ++      +N     
Sbjct: 107 LKGYLNKYRETEGEKNSMARGQEDQDHSSHDDHHINNNKKQLQNGANGINTVGTNKVDLL 166

Query: 325 SSRNGYYSLGGAKMT-PNNYGDPGRAFGYGDHIITGAFNNIGNITEIEGSANRV 167
           S+  G+YSLGG +M+ P  +G+ GR   YGD  +         +T  +GSAN +
Sbjct: 167 SNIGGFYSLGGQQMSAPKAFGESGRVIDYGDQNL---------MTYGDGSANHL 211


>ref|XP_002310018.2| hypothetical protein POPTR_0007s06480g [Populus trichocarpa]
           gi|550334271|gb|EEE90468.2| hypothetical protein
           POPTR_0007s06480g [Populus trichocarpa]
          Length = 210

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 40/83 (48%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHLPIPTNSSTNNLGKLSKVSDSNS----DHFQSSRNG 311
           LKVYLNKYR+ EGEK SMAR+ED L  PTN  +    +  KV+ S S       QS   G
Sbjct: 107 LKVYLNKYRDTEGEKNSMARQEDQLS-PTNHGSLGTHETIKVNGSPSLSTGMDLQSFNAG 165

Query: 310 YYSLGGAKMTPNNYGDPGRAFGY 242
            YSL G ++T  +YG   R  GY
Sbjct: 166 LYSL-GTEVTAKSYGQNTRFLGY 187


>ref|XP_003524282.1| PREDICTED: nuclear transcription factor Y subunit B-7-like [Glycine
           max]
          Length = 225

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
 Frame = -2

Query: 478 LKVYLNKYRENEGEKTSMAREEDHLP----------IPTNSSTNNLGKLSKVSDSNSDHF 329
           LK YLN YRE EGEK+SMA++E+H P          +  N   +++   +K +D N+   
Sbjct: 109 LKFYLNNYRETEGEKSSMAKQEEHSPTHQTNIDGVVVEINKLHHSVAATNKAADFNT--- 165

Query: 328 QSSRNGYYSLGGAKMTPNNYGDPGRAFGYGDHIITGAFNNIGNITEIEGSANRVIATNL 152
             S  G+YS+G     P ++ + G   GY +  I  +  +     + + S NR++  NL
Sbjct: 166 -FSGGGFYSVGPQVAAPKSFTEIGGINGYRESSIAQSAVS----GDHDASGNRMMPPNL 219


Top