BLASTX nr result

ID: Rauwolfia21_contig00036513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00036513
         (402 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]     112   4e-23
ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-l...   112   5e-23
ref|XP_006452831.1| hypothetical protein CICLE_v10009897mg [Citr...   112   5e-23
ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citr...   112   5e-23
gb|EOY30223.1| Small nuclear ribonucleoprotein family protein is...   112   7e-23
ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like prote...   112   7e-23
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   112   7e-23
ref|XP_004488097.1| PREDICTED: probable U6 snRNA-associated Sm-l...   111   9e-23
ref|XP_004141715.1| PREDICTED: U6 snRNA-associated Sm-like prote...   111   9e-23
ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Me...   111   9e-23
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote...   111   1e-22
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is...   110   1e-22
ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Me...   110   1e-22
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   110   1e-22
gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus...   110   2e-22
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote...   110   2e-22
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote...   110   2e-22
gb|AFK42388.1| unknown [Medicago truncatula]                          110   2e-22
ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [A...   109   3e-22
ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutr...   109   4e-22

>gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]
          Length = 128

 Score =  112 bits (281), Expect = 4e-23
 Identities = 54/62 (87%), Positives = 60/62 (96%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD+RKLLG LRSFDQFANVVLEGACER+IVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKILVLLRDNRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
           [Citrus sinensis]
          Length = 128

 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLG LRSFDQFANVVLEGACER+IVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_006452831.1| hypothetical protein CICLE_v10009897mg [Citrus clementina]
           gi|557556057|gb|ESR66071.1| hypothetical protein
           CICLE_v10009897mg [Citrus clementina]
          Length = 96

 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLG LRSFDQFANVVLEGACER+IVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_006452830.1| hypothetical protein CICLE_v10009897mg [Citrus clementina]
           gi|557556056|gb|ESR66070.1| hypothetical protein
           CICLE_v10009897mg [Citrus clementina]
          Length = 128

 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLG LRSFDQFANVVLEGACER+IVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>gb|EOY30223.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 128

 Score =  112 bits (279), Expect = 7e-23
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLG LRSFDQFANVVLEGACERVIVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
           vesca subsp. vesca]
          Length = 128

 Score =  112 bits (279), Expect = 7e-23
 Identities = 55/62 (88%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLG LRSFDQFANVVLEGACERVIVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
           gi|561008464|gb|ESW07413.1| hypothetical protein
           PHAVU_010G127800g [Phaseolus vulgaris]
          Length = 128

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKL+GTLRSFDQFAN VLEGACERVIVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_004488097.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
           [Cicer arietinum]
          Length = 128

 Score =  111 bits (278), Expect = 9e-23
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLG LRSFDQFANVVLEGACERVIVGDLY D+PLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_004141715.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cucumis
           sativus] gi|449480489|ref|XP_004155908.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm1-like [Cucumis
           sativus]
          Length = 128

 Score =  111 bits (278), Expect = 9e-23
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +KV+V+LRD RKLLG LRSFDQFAN VLEG+CERVIVGDLYSDIPLGLYVIRGENVVL+G
Sbjct: 21  KKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
           gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like
           protein LSm1 [Medicago truncatula]
          Length = 128

 Score =  111 bits (278), Expect = 9e-23
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLG LRSFDQFANVVLEGACERVIVGDLY D+PLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
           [Cicer arietinum]
          Length = 128

 Score =  111 bits (277), Expect = 1e-22
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++++LRD RKL+GTLRSFDQFAN VLEGACERV+VGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 128

 Score =  110 bits (276), Expect = 1e-22
 Identities = 53/62 (85%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKL+GTLRSFDQFAN VLEGAC+RVIVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
           gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like
           protein LSm1 [Medicago truncatula]
          Length = 131

 Score =  110 bits (276), Expect = 1e-22
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++++LRD RKL+GTLRSFDQFAN VLEGACERVIVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           E+
Sbjct: 81  EM 82


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  110 bits (276), Expect = 1e-22
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD+RKLLG LRSFDQFAN VLEGACERVIVGDLY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
          Length = 128

 Score =  110 bits (275), Expect = 2e-22
 Identities = 53/62 (85%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKL+GTLRSFDQFAN VLEGACERVIVG+LY DIPLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGELYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           tuberosum]
          Length = 128

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLGTLRSFDQFAN VLEGACERVIVG++Y DIPLGLY+IRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEIYCDIPLGLYIIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           lycopersicum]
          Length = 128

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLGTLRSFDQFAN VLEGACERVIVG++Y DIPLGLY+IRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEIYCDIPLGLYIIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>gb|AFK42388.1| unknown [Medicago truncatula]
          Length = 128

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/62 (85%), Positives = 59/62 (95%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLG LRSFDQFANVVL+GACERVIVGDLY D+PLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLLGLLRSFDQFANVVLKGACERVIVGDLYCDVPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
           gi|548839141|gb|ERM99455.1| hypothetical protein
           AMTR_s00131p00107350 [Amborella trichopoda]
          Length = 128

 Score =  109 bits (273), Expect = 3e-22
 Identities = 53/62 (85%), Positives = 58/62 (93%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           +K++V+LRD RKLLG LRSFDQFAN VLEGACERVIVGDLY D+PLGLYVIRGENVVLIG
Sbjct: 21  KKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDLYCDLPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


>ref|XP_006407130.1| hypothetical protein EUTSA_v10021763mg [Eutrema salsugineum]
           gi|557108276|gb|ESQ48583.1| hypothetical protein
           EUTSA_v10021763mg [Eutrema salsugineum]
          Length = 128

 Score =  109 bits (272), Expect = 4e-22
 Identities = 53/62 (85%), Positives = 58/62 (93%)
 Frame = +1

Query: 217 RKVIVMLRDSRKLLGTLRSFDQFANVVLEGACERVIVGDLYSDIPLGLYVIRGENVVLIG 396
           RK++V+LRD RKL+GTLRSFDQFAN VLEGACERVIVG+ Y DIPLGLYVIRGENVVLIG
Sbjct: 21  RKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIG 80

Query: 397 EL 402
           EL
Sbjct: 81  EL 82


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