BLASTX nr result

ID: Rauwolfia21_contig00035905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00035905
         (437 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360615.1| PREDICTED: psbP-like protein 2, chloroplasti...    56   4e-06
ref|XP_004248685.1| PREDICTED: psbP-like protein 2, chloroplasti...    55   1e-05

>ref|XP_006360615.1| PREDICTED: psbP-like protein 2, chloroplastic-like isoform X1
           [Solanum tuberosum]
          Length = 226

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = -2

Query: 133 MGSVKQS*QFLTSVCTFSTGVPDKYEVFVDKADGYSYYYPSDWR 2
           +G+   S   L +    + GVP+ YE+FVDK DGYSYYYPSDWR
Sbjct: 52  LGAGALSLNLLPATPLLAQGVPENYEIFVDKRDGYSYYYPSDWR 95


>ref|XP_004248685.1| PREDICTED: psbP-like protein 2, chloroplastic-like [Solanum
           lycopersicum]
          Length = 227

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = -2

Query: 76  GVPDKYEVFVDKADGYSYYYPSDWR 2
           GVP+ YE+FVDK DGYSYYYPSDWR
Sbjct: 72  GVPENYEIFVDKRDGYSYYYPSDWR 96


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