BLASTX nr result

ID: Rauwolfia21_contig00035899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00035899
         (1367 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323691.2| hypothetical protein POPTR_0016s14860g [Popu...    73   2e-10
ref|XP_002326268.1| predicted protein [Populus trichocarpa] gi|5...    71   9e-10
ref|XP_002531818.1| conserved hypothetical protein [Ricinus comm...    60   2e-06

>ref|XP_002323691.2| hypothetical protein POPTR_0016s14860g [Populus trichocarpa]
            gi|550321536|gb|EEF05452.2| hypothetical protein
            POPTR_0016s14860g [Populus trichocarpa]
          Length = 346

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
 Frame = +1

Query: 568  KFLVKLRVTTFRMMMASLLKLREFTSSPPEKMSRQDIHQVKPRNKQMLVVKPFKKLF--- 738
            KFLVK R    R ++AS +K R+  + P  K         K       ++KPF K     
Sbjct: 202  KFLVKFRTLRIRTLLASFMKSRQEINFPRGK---------KNIGAYQTLIKPFDKWLVRK 252

Query: 739  --GRVQYTQRWKGSGKTGGNTQRSSSAIGGVIINLKGSEEAGRPDGDGGEKAIISSKGQE 912
              G    +    G+G      +++  AI GV+                 E    S  G++
Sbjct: 253  GQGSSSNSNNPFGNGDRSRVMEKNLDAIRGVL-----------------EAMSTSVGGKD 295

Query: 913  KKTKSCPASVKSSPTKVHFSCEIGGGPTSTHSQTKMHCGRDNSVQAAIAHCKKSVG 1080
            +K+KSCP+S KSSPT + FS         +  Q    C +DNS+QAAIAHCK+S G
Sbjct: 296  RKSKSCPSSTKSSPTHLGFS---------SGDQNHKICAQDNSIQAAIAHCKRSFG 342


>ref|XP_002326268.1| predicted protein [Populus trichocarpa]
            gi|566175687|ref|XP_006381276.1| hypothetical protein
            POPTR_0006s11310g [Populus trichocarpa]
            gi|550335977|gb|ERP59073.1| hypothetical protein
            POPTR_0006s11310g [Populus trichocarpa]
          Length = 345

 Score = 71.2 bits (173), Expect = 9e-10
 Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 7/180 (3%)
 Frame = +1

Query: 562  VGKFLVKLRVTTFRMMMASLLKLREFTSSPPEKMSRQDIHQVKPRNK--QMLVVKPFKKL 735
            V KFL+K R    R ++AS +K  +  +SP E           PRN      ++ PF K 
Sbjct: 197  VMKFLIKFRTLKIRTLLASFMKSCQVINSPQE-----------PRNTGTHQKLMNPFDKW 245

Query: 736  FGRVQ-----YTQRWKGSGKTGGNTQRSSSAIGGVIINLKGSEEAGRPDGDGGEKAIISS 900
            F         Y+    G G+  G  +     +  V+  +  S   GR D           
Sbjct: 246  FAPGSSSSNVYSNNLFGDGERSGVLEMKMDTVRAVVETMSSSSSIGRED----------- 294

Query: 901  KGQEKKTKSCPASVKSSPTKVHFSCEIGGGPTSTHSQTKMHCGRDNSVQAAIAHCKKSVG 1080
                +K +SCP+  KSSP     S +          Q    C +DNS+QAAIAHCK+S G
Sbjct: 295  ----RKFRSCPSPTKSSPVHQELSSD---------DQNHKICAKDNSIQAAIAHCKRSFG 341


>ref|XP_002531818.1| conserved hypothetical protein [Ricinus communis]
            gi|223528552|gb|EEF30575.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 344

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 46/170 (27%), Positives = 75/170 (44%)
 Frame = +1

Query: 571  FLVKLRVTTFRMMMASLLKLREFTSSPPEKMSRQDIHQVKPRNKQMLVVKPFKKLFGRVQ 750
            F VKLRV+  + ++AS LK  +  S   +    ++  +   RN    ++ P  K     +
Sbjct: 205  FFVKLRVSKLKTLLASFLKASQTNSGRHKGKKPEETFRTNYRN----LINPIDKGSAAAE 260

Query: 751  YTQRWKGSGKTGGNTQRSSSAIGGVIINLKGSEEAGRPDGDGGEKAIISSKGQEKKTKSC 930
               R +G+G+     + +  AI   ++        GR D               ++TKSC
Sbjct: 261  ---RKQGNGEKSRMLELNLDAIKEYVLEAMSITSLGRRD---------------RRTKSC 302

Query: 931  PASVKSSPTKVHFSCEIGGGPTSTHSQTKMHCGRDNSVQAAIAHCKKSVG 1080
            P S KSSP  +            + S++      +NS+QAAIAHCK+S+G
Sbjct: 303  PVSTKSSPIHLR-----------SMSESNKMSATENSIQAAIAHCKRSLG 341


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