BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00035893
         (1260 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...   112   6e-38
ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Popu...    99   2e-34
ref|XP_002318395.1| predicted protein [Populus trichocarpa]           103   3e-32
ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutr...   143   2e-31
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...   139   2e-30
ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutr...   135   3e-29
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...   135   4e-29
ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, part...   123   2e-25
ref|XP_006398030.1| hypothetical protein EUTSA_v10001272mg [Eutr...   115   3e-23
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...   113   1e-22
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...   110   1e-21
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]         110   2e-21
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]         110   2e-21
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...   110   2e-21
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    67   2e-21
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             67   3e-21
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    67   3e-21
ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutr...   103   2e-19
ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, part...   100   2e-18
ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, part...    99   4e-18

>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score =  112 bits (280), Expect(2) = 6e-38
 Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 2/226 (0%)
 Frame = +2

Query: 8   RTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQIR 187
           R EF  M+CC ++ KDLE+HY+RM +R+Y++N  +D +LK  + +S+ ++L  E  R I 
Sbjct: 66  RQEFFEMRCCSLKDKDLERHYQRMTQRYYVLNGFNDHTLKNIYISSLPQELQPEIHRMIA 125

Query: 188 NSNIGWNQITIGQLWQ*C-NRLQKNC-VQTKFS*KYQTNTKILGPACSKKYLSIKCKDSN 361
            +      +++GQ+ Q     L+K C +   FS   Q  +K +  AC K YL IKCKD  
Sbjct: 126 AAQKDVKTLSLGQIHQIALEALEKLCRLHQHFSEVMQQKSKFI-KACKKPYLEIKCKDKI 184

Query: 362 CTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAK 541
           C+C+  KK H+ KY+                                 CF+C +KG+F+K
Sbjct: 185 CSCTTRKKHHRQKYT------KPSGSFKKKALKFFKKKPFRGKKENQRCFVCGEKGHFSK 238

Query: 542 YCPNKNKRQQFIIQLAPHIERKDYSDIEPLLELTEKLSLDSLMVIA 679
            CPNK  +   +I     +E     D+E L   +E+ S D   + A
Sbjct: 239 RCPNKTSKAAKLINSLQPLE----GDLESL--YSEQSSADEETIFA 278



 Score = 73.6 bits (179), Expect(2) = 6e-38
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
 Frame = +3

Query: 738  PFFTFKDFMS-MKQKPYPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNP 914
            P ++FK+  S +   P P +   I++   S    V A +DTGA  T+MNP IL    W  
Sbjct: 304  PIYSFKEIGSTLPTPPLPCVEIHILASKFSHPKKVIAYMDTGAQITMMNPSILPTEAWVK 363

Query: 915  CFKVFKAANGNKFVIDKIIK-SIHIQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVPHL 1091
                F AA+G  F  D + K  I I+ FP   +  KV+G  LP KD+ +G D+ S    L
Sbjct: 364  HAAYFVAADGKTFRTDLMTKEKIGIRFFPECIVWTKVIGSSLPNKDIVVGMDVYSAANRL 423

Query: 1092 PFTQADIVYRGQTLPWT 1142
                  I ++ +  P++
Sbjct: 424  QILPTGIKFKREFKPYS 440


>ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Populus trichocarpa]
            gi|550326181|gb|ERP54440.1| hypothetical protein
            POPTR_0012s01890g [Populus trichocarpa]
          Length = 1153

 Score = 98.6 bits (244), Expect(3) = 2e-34
 Identities = 68/229 (29%), Positives = 105/229 (45%), Gaps = 4/229 (1%)
 Frame = +2

Query: 5    ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
            AR E+  MKCC     DLE+H++ M +R++I+   DD SLK AF  SI + L +ET R  
Sbjct: 456  ARYEYFKMKCCSYLRSDLERHFKEMCQRYHILFGPDDPSLKHAFLASIPRDLANETFRLF 515

Query: 185  RNSNIGWNQITIGQLW-Q*CNRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKD-S 358
            +      +  ++G ++ Q    L K C Q K+  K     K +  AC +  L IKC D +
Sbjct: 516  KTRKEVIDNQSLGTIFHQVLEALNKICDQHKYFTKILQPDKTMLHACKRPDLLIKCSDHA 575

Query: 359  NCTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFA 538
            +C C + K  H  K                                   CF+CK+KG+FA
Sbjct: 576  DCNCPLKKTKHFKKI--HRSSFHGHPKKWKFLRRRRTRRPKPFTSSSNRCFICKRKGHFA 633

Query: 539  KYCPNKNKRQQFIIQLAPHIER--KDYSDIEPLLELTEKLSLDSLMVIA 679
            K CP K  +   +I       +   D  ++E L  LT++++ D++  +A
Sbjct: 634  KACPQKKAQSLKLIDFLAQTTKFNPDDDEVEFLFSLTDEITPDTIAAVA 682



 Score = 67.4 bits (163), Expect(3) = 2e-34
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
 Frame = +3

Query: 780  PYPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVI 959
            P PL    I +  ++  I   AL DTGA  T+ NP +L  + W    + F+AA+   F  
Sbjct: 705  PIPLAPVSIFTSTYAKPIKAIALFDTGAHRTIFNPKVLPPHCWVTHREYFRAADNQVFCT 764

Query: 960  D-KIIKSIHIQLFPNLTITRKVLGFKLPQKDLFIGFDLL--SQVPHLPFTQADIVYRGQT 1130
              K  + I IQ+ P  ++   VLG  LP KDL IGFD+   S+   LP     I Y+   
Sbjct: 765  QYKTKRPITIQILPQCSVKTYVLGSPLPGKDLVIGFDVYFKSKFKILP---RGIQYKTHF 821

Query: 1131 LPWTTNSNFFQ 1163
            LP+T   + ++
Sbjct: 822  LPYTLTPSLYE 832



 Score = 28.5 bits (62), Expect(3) = 2e-34
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 1196 IIRAEIITRSCAQFHSEFLSK 1258
            +I+A+II  SC+  H EFL+K
Sbjct: 843  LIKAQIIQHSCSNSHQEFLAK 863


>ref|XP_002318395.1| predicted protein [Populus trichocarpa]
          Length = 1497

 Score =  103 bits (256), Expect(2) = 3e-32
 Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
 Frame = +2

Query: 5    ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
            AR E+  MKCC     DLE+H++ M +R++I++  DD SLK AF  SI + + DET R  
Sbjct: 867  ARYEYFKMKCCSYLRSDLERHFKEMCRRYHILSGPDDPSLKHAFLASIPRDMADETFRLF 926

Query: 185  RNSNIGWNQITIGQLW-Q*CNRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKD-S 358
            +      +  ++G ++ Q    L K C Q K+  K     K +  AC +  L IKC D +
Sbjct: 927  KTRKEVIDNQSLGTIFHQVLEALNKMCDQHKYFTKILQPDKTMLRACKRPDLLIKCSDHA 986

Query: 359  NCTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFA 538
            +C C + KK H  K                                   CF+CK+KG+FA
Sbjct: 987  DCNCPLKKKEHFKKI--HRSSFHGHPKKWKFLRRRRTRRPKPFTSSSNRCFICKRKGHFA 1044

Query: 539  KYCPNKNKRQQFIIQLAPHIER--KDYSDIEPLLELTEKLSLDSLMVIA 679
            K CP K  +   +I       +   D  ++E    LT++++ D++  +A
Sbjct: 1045 KACPQKKAQSLKLIDFLAQTTKFNPDDDEVESSFSLTDEITPDTIAAVA 1093



 Score = 63.5 bits (153), Expect(2) = 3e-32
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = +3

Query: 780  PYPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVI 959
            P PL    I +  ++  I   AL DTGA  T+ NP +L  + W    + F+AA+   F  
Sbjct: 1116 PIPLAPVSIFTSTYAKPIKAIALFDTGAHRTIFNPKVLPPHCWVTHREYFRAADNQVFCT 1175

Query: 960  D-KIIKSIHIQLFPNLTITRKVLGFKLPQKDLFIGFDL 1070
              K  + I IQ+ P  ++   VLG  LP KDL IGFD+
Sbjct: 1176 QYKTKRPITIQILPQCSVKTYVLGSPLPGKDLVIGFDV 1213


>ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
            gi|557107078|gb|ESQ47393.1| hypothetical protein
            EUTSA_v10028344mg [Eutrema salsugineum]
          Length = 1508

 Score =  143 bits (360), Expect = 2e-31
 Identities = 83/225 (36%), Positives = 124/225 (55%), Gaps = 1/225 (0%)
 Frame = +2

Query: 5    ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
            AR E+++M+CC  + KDLEKHYERM KRFY++N IDD++LKQA+ NS+ + L +ET + +
Sbjct: 388  AREEYMSMRCCSFKRKDLEKHYERMSKRFYVLNGIDDVNLKQAYLNSLPEPLGNETSQIL 447

Query: 185  RNSNIGWNQITIGQLWQ*C-NRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKDSN 361
               N+  +Q ++G+++Q     L+K C   KF  + Q   K+LG AC +  LSIKCK   
Sbjct: 448  SLKNMTLSQASLGEIYQISLAALEKLCNHQKFFKQLQEKGKLLGRACDRPELSIKCKTKR 507

Query: 362  CTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAK 541
            C CS + K  K   S +                               C++CK+K ++AK
Sbjct: 508  CKCSTSYKQEK--KSRNKWQKRYPKLSGGKKWKFFRRKKQRGYTKSDRCYICKKKRHYAK 565

Query: 542  YCPNKNKRQQFIIQLAPHIERKDYSDIEPLLELTEKLSLDSLMVI 676
             CPNK KR   I  LA  +E  D SDIE +  L +  + D+++ +
Sbjct: 566  QCPNKKKRDYLIGYLA-QVEDIDDSDIESIFSLDDGPTDDTVLAM 609



 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 44/99 (44%), Positives = 54/99 (54%)
 Frame = +3

Query: 777  KPYPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFV 956
            +P P     I    +   IPV A  DTG  S+++ PDIL   +W+ C   FKAANG  F 
Sbjct: 659  QPAPNSKIYIFPTKYDKPIPVIAFFDTGVASSIIKPDILPSTHWDRCSVAFKAANGQIFH 718

Query: 957  IDKIIKSIHIQLFPNLTITRKVLGFKLPQKDLFIGFDLL 1073
            I  I K IHIQLF    +  KV G  LP KD  +GFD+L
Sbjct: 719  ISLISKPIHIQLFLGYMVKSKVYGSDLPGKDFILGFDIL 757


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
            gi|557110784|gb|ESQ51075.1| hypothetical protein
            EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score =  139 bits (350), Expect = 2e-30
 Identities = 82/216 (37%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
 Frame = +2

Query: 5    ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
            AR E+++M+CC  + KDLEKHYERM KRFY +N IDD++LKQA+ NS+ + L +ET R +
Sbjct: 412  AREEYMSMRCCSFKRKDLEKHYERMSKRFYALNGIDDVNLKQAYLNSLPEPLGNETSRIL 471

Query: 185  RNSNIGWNQITIGQLWQ-*CNRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKDSN 361
               N+  +Q ++G+++Q   + L+K C   KF  + Q   K+LG AC +  LSIKCK   
Sbjct: 472  SLKNMTLSQASLGEIYQISLSALEKLCNHQKFFKQLQEQGKLLGRACDRPELSIKCKAKR 531

Query: 362  CTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAK 541
              CS + K    K S                                 C++CK+KG++AK
Sbjct: 532  FGCSTSYKQE--KKSRKKWQKRYPKLSGGKKWKFFRRKKQRGYKKSDRCYICKKKGHYAK 589

Query: 542  YCPNKNKRQQFIIQLAPHIERKDYSDIEPLLELTEK 649
             CPNK KR   +  LA  +E  D SDIE +  L ++
Sbjct: 590  QCPNKKKRDILLGYLA-QVEDIDDSDIESIFSLDDE 624



 Score = 99.0 bits (245), Expect(2) = 4e-20
 Identities = 49/108 (45%), Positives = 65/108 (60%)
 Frame = +3

Query: 837  VTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVIDKIIKSIHIQLFPNLTITR 1016
            V  LLDTGA S+++ PDIL   +W+ C   FKAANG  F I  I K IHIQLFP   +  
Sbjct: 670  VEDLLDTGAASSIIKPDILPSTHWDRCSVAFKAANGQIFHISLINKPIHIQLFPGYMVKS 729

Query: 1017 KVLGFKLPQKDLFIGFDLLSQVPHLPFTQADIVYRGQTLPWTTNSNFF 1160
            KV G  LP KD  +GFD+L  +  + +    + ++   LPWTT S+F+
Sbjct: 730  KVYGSDLPGKDFILGFDILHSLKIVSWHPKGLKHKNHLLPWTTISHFY 777



 Score = 27.3 bits (59), Expect(2) = 4e-20
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 1199 IRAEIITRSCAQFHSEFLSK 1258
            I+ EI   SCA  HSEFL+K
Sbjct: 785  IKEEITKTSCASSHSEFLTK 804


>ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutrema salsugineum]
           gi|557109899|gb|ESQ50196.1| hypothetical protein
           EUTSA_v10002230mg [Eutrema salsugineum]
          Length = 469

 Score =  135 bits (341), Expect = 3e-29
 Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 1/225 (0%)
 Frame = +2

Query: 5   ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
           AR E+++M+CC  + KDLEKHYERM KRFY +N ID+++LKQA+ NS+ + L ++T R +
Sbjct: 65  AREEYMSMRCCSFKKKDLEKHYERMSKRFYALNGIDNVNLKQAYLNSLPEPLGNKTSRIL 124

Query: 185 RNSNIGWNQITIGQLWQ*C-NRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKDSN 361
              N+  NQ ++G+++Q     L+K C   KF  + Q   K+LG A  +  LSIKCK   
Sbjct: 125 SLKNMTLNQASLGEIYQISLAALEKLCNHQKFFKQLQEQGKLLGRAYDRPDLSIKCKAKR 184

Query: 362 CTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAK 541
           C C  + K  K   S +                               C++CK+KG++AK
Sbjct: 185 CGCFTSNKQEK--NSRNKWQKRYPKLSGGKNWKFFTRKKQRGYKKSDRCYICKKKGHYAK 242

Query: 542 YCPNKNKRQQFIIQLAPHIERKDYSDIEPLLELTEKLSLDSLMVI 676
            CPNK KR   +  LA   E  D SDIE +  L ++ + D ++ +
Sbjct: 243 QCPNKKKRDNLLGYLA-QFEDIDDSDIESIFSLDDEPTDDIVIAM 286



 Score = 82.0 bits (201), Expect = 5e-13
 Identities = 46/109 (42%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
 Frame = +3

Query: 831  IPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKF--VIDKIIKSIHIQLFPNL 1004
            IPV A  DTGA S ++ PDIL   +W+ C    KAANG  F   I  I K IHIQLFP  
Sbjct: 354  IPVIAFFDTGAASLIIKPDILPSTHWDRCSVALKAANGQIFHSHISLISKPIHIQLFPGY 413

Query: 1005 TITRKVLGFKLPQKDLFIGFDLLSQVPHLPFTQADI-----VYRGQTLP 1136
             +  KV G  +P KD  +GFD+L  +  L +    +      Y GQ  P
Sbjct: 414  MVKSKVYGCDIPGKDFILGFDILHSLKRLSWHPKGLKHKTTCYHGQPFP 462


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score =  135 bits (340), Expect = 4e-29
 Identities = 79/225 (35%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
 Frame = +2

Query: 5    ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
            AR E+++M+CC  + KDLEKHYERM KRFY +N IDD++LKQ +  S+ + L +ET R +
Sbjct: 783  AREEYMSMRCCSFKRKDLEKHYERMSKRFYALNGIDDVNLKQTYLKSLPEPLGNETSRIL 842

Query: 185  RNSNIGWNQITIGQLWQ*C-NRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKDSN 361
               N+  +Q ++G++++     L+K C   KF  + Q   K+LG AC +  LSIKCK   
Sbjct: 843  SLKNMTLSQASLGEIYKISLAALEKLCNHQKFFKQLQEQGKLLGRACDRPELSIKCKTKR 902

Query: 362  CTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAK 541
            C CS + K  K   S +                               C++ K+KG++AK
Sbjct: 903  CGCSTSYKQEK--KSRNKWQKRYPKLSGGKKWKFFRRKKQRGYKKSDRCYIYKKKGHYAK 960

Query: 542  YCPNKNKRQQFIIQLAPHIERKDYSDIEPLLELTEKLSLDSLMVI 676
             CPNK KR   +  LA  +E  D S+IE +  L ++ + D+++ +
Sbjct: 961  QCPNKKKRDNLLRYLA-QVEDIDDSNIESIFSLDDEPTDDTVLAM 1004



 Score =  100 bits (248), Expect(2) = 2e-20
 Identities = 51/128 (39%), Positives = 70/128 (54%)
 Frame = +3

Query: 777  KPYPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFV 956
            +P P     I    +   IPV A  DTGA S+++ PDIL   +W+ C   FKAAN   F 
Sbjct: 1053 QPAPNAKIYIFPTKYDKPIPVIAFFDTGAASSIIKPDILPSTHWDQCSVAFKAANRQIFH 1112

Query: 957  IDKIIKSIHIQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVPHLPFTQADIVYRGQTLP 1136
            I  I K IHIQLFP   +  KV G  LP KD  +GF++L  +  + +    + ++   LP
Sbjct: 1113 ISLISKPIHIQLFPGYMVKSKVYGSDLPGKDFILGFNILHSLKRVSWHPKCLKHKNHLLP 1172

Query: 1137 WTTNSNFF 1160
            WTT S+F+
Sbjct: 1173 WTTISHFY 1180



 Score = 27.3 bits (59), Expect(2) = 2e-20
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 1199 IRAEIITRSCAQFHSEFLSK 1258
            I+ EI   SCA  HSEFL+K
Sbjct: 1188 IKEEITKTSCASSHSEFLTK 1207


>ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, partial [Eutrema salsugineum]
            gi|557104186|gb|ESQ44532.1| hypothetical protein
            EUTSA_v10003477mg, partial [Eutrema salsugineum]
          Length = 751

 Score =  123 bits (308), Expect = 2e-25
 Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 1/196 (0%)
 Frame = +2

Query: 5    ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
            AR E+++M+CC  + KDLEKHYERM KR Y +N IDD++ KQA+ N + + L +ET R +
Sbjct: 557  AREEYMSMRCCSFKRKDLEKHYERMSKRLYALNGIDDVNHKQAYLNQLPEPLGNETSRIL 616

Query: 185  RNSNIGWNQITIGQLWQ*C-NRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKDSN 361
               N+  +Q ++G+++Q     L+K C   KF  + Q    +LG AC +  LSIKCK   
Sbjct: 617  SLKNMTLSQASLGEIYQISLAALEKLCNHQKFFKQLQEQGTLLGRACDRPELSIKCKKKR 676

Query: 362  CTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAK 541
            C CS + K  K   S +                               C++CK KG++AK
Sbjct: 677  CGCSTSYKQEK--KSRNKWEKRYPKLSGGKKWKFFRRKKQRGYKKSDRCYICKNKGHYAK 734

Query: 542  YCPNKNKRQQFIIQLA 589
              PNK KR   +  LA
Sbjct: 735  QRPNKKKRDNLLGYLA 750


>ref|XP_006398030.1| hypothetical protein EUTSA_v10001272mg [Eutrema salsugineum]
           gi|557099112|gb|ESQ39483.1| hypothetical protein
           EUTSA_v10001272mg [Eutrema salsugineum]
          Length = 828

 Score =  115 bits (289), Expect = 3e-23
 Identities = 59/131 (45%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
 Frame = +2

Query: 5   ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
           AR E+++M+CC  + KDLEKHYERM KRFY +N IDD+++KQA+ NS+ + L +ET R +
Sbjct: 419 AREEYMSMRCCSFKRKDLEKHYERMSKRFYALNGIDDVNMKQAYLNSLPEPLGNETSRIL 478

Query: 185 RNSNIGWNQITIGQLWQ-*CNRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKDSN 361
              N+  +Q ++G+++Q     L+K C   KF  + Q   K+LG AC +  LSIKCK   
Sbjct: 479 SLKNMTLSQASLGEIYQISLAALEKLCNYQKFFKELQEQGKLLGRACDRPELSIKCKTKR 538

Query: 362 CTCSITKKSHK 394
           C CS + K  K
Sbjct: 539 CGCSTSYKQEK 549



 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 38/110 (34%), Positives = 53/110 (48%)
 Frame = +3

Query: 831  IPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVIDKIIKSIHIQLFPNLTI 1010
            IPV A  D GA S+++ PDIL   +W+ C    KAANG  F I  II             
Sbjct: 575  IPVIAFFDMGAASSIIKPDILPSTHWDRCSVAVKAANGQIFYISLII------------- 621

Query: 1011 TRKVLGFKLPQKDLFIGFDLLSQVPHLPFTQADIVYRGQTLPWTTNSNFF 1160
                 G  LP KD  +GFD+L  +  + +    + ++   LPWTT S+ +
Sbjct: 622  ----CGTDLPGKDFILGFDILHSLKRVSWHPKGLKHKNHLLPWTTISHSY 667


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score =  113 bits (283), Expect = 1e-22
 Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 3/198 (1%)
 Frame = +2

Query: 8    RTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQIR 187
            R EF  M+CC +++KDLE+HY+RM +R+Y++N  +D +LK  + +S+ ++L  E  R I 
Sbjct: 903  RQEFFEMRCCSLKVKDLERHYQRMTQRYYVLNGFNDHTLKNIYISSLPQELQPEIHRMIA 962

Query: 188  NSNIGWNQITIGQLWQ*C-NRLQKNC-VQTKFS*KYQTNTKILGPACSKKYLSIKCKDSN 361
             +      +++GQ+ Q     L+K C +   FS   Q  +K +  AC K YL IKCKD  
Sbjct: 963  AARKDVKILSLGQIHQIALEALEKLCTLHQHFSEIVQQKSKFI-KACKKPYLEIKCKDKI 1021

Query: 362  CTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAK 541
            C+C+  KK H+ KY+                                 CF+C +KG+F+K
Sbjct: 1022 CSCTTRKKHHRQKYT--RPSRSFKKIKKKKALKFFKKKPFRGKKENQRCFVCGEKGHFSK 1079

Query: 542  YCPNK-NKRQQFIIQLAP 592
             CPNK NK  + I  L P
Sbjct: 1080 RCPNKTNKAAKLINSLQP 1097



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
 Frame = +3

Query: 738  PFFTFKDFMS-MKQKPYPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNP 914
            P ++FK+  S +   P P +   I++   S    + A +DTGA  T+MNP IL    W  
Sbjct: 1145 PIYSFKEIGSTLPTPPLPCVEIHILASKFSHPKKIIAYMDTGAQITMMNPSILPTEAWVK 1204

Query: 915  CFKVFKAANGNKFVIDKIIK-SIHIQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVPHL 1091
                F AA+G  F  D + K  I I+ FP   +  KV+G  LP KD+ +G D+ S    L
Sbjct: 1205 HAAYFVAADGKTFRTDLMTKEKIGIRFFPECIVWTKVIGSSLPNKDIVVGMDVYSAANRL 1264

Query: 1092 PFTQADIVYRGQTLPWT 1142
                  I ++ +  P++
Sbjct: 1265 QILPTGIKFKREFKPYS 1281


>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score =  110 bits (275), Expect = 1e-21
 Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
 Frame = +2

Query: 8   RTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQIR 187
           R EF  M+CC +++KDLE+HY+RM +R+Y++N  +D SLK  + +S+ ++L  E  R I 
Sbjct: 343 RQEFYEMRCCSLKVKDLERHYQRMTQRYYVLNGFNDHSLKNTYISSLPQELQPEIHRMIT 402

Query: 188 NSNIGWNQITIGQLWQ*C-NRLQKNC-VQTKFS*KYQTNTKILGPACSKKYLSIKCKDSN 361
            +      +++GQ+ Q     L+K C +   FS   Q  +K +  AC K YL IKCK++ 
Sbjct: 403 ATQKDIKALSLGQIHQITLEALEKLCRLHQHFSEIVQQKSKFI-KACKKPYLEIKCKNNK 461

Query: 362 CTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAK 541
           C+C   KK H+  Y                                  CF+C +KG+F+K
Sbjct: 462 CSCLTRKKHHRKSYIKPPRIFKKVKKRKALKFFKRKPFRGKKEDQR--CFVCGEKGHFSK 519

Query: 542 YCPNK-NKRQQFIIQLAP 592
            CPNK NK  + I  L P
Sbjct: 520 RCPNKSNKAAKMINSLQP 537



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
 Frame = +3

Query: 732  QIPFFTFKDFMSMKQKP-YPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYW 908
            + P ++FK+  S    P  P +   +++   S    V A +DTGA  T+MNP IL    W
Sbjct: 583  RFPIYSFKEIGSTLPTPSLPCVEIHVLASKFSHPKKVIAYMDTGAQITMMNPSILPTEAW 642

Query: 909  NPCFKVFKAANGNKFVIDKIIK-SIHIQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVP 1085
                  F AA+G  F  D + K  I I+ FP   +  KV+G  LP KD+ +G D+ S   
Sbjct: 643  AKHAAYFVAADGKTFKTDLMTKEKIGIRFFPECIVWTKVIGSSLPNKDIVVGMDVYSAAN 702

Query: 1086 HLPFTQADIVYRGQTLPWT 1142
             L      I Y+ +  P++
Sbjct: 703  KLQILPTGIKYKREFKPYS 721


>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score =  110 bits (274), Expect = 2e-21
 Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
 Frame = +2

Query: 5    ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
            AR ++L+MKCC +  KDL+ HY+RM   FY +N  ++ +LK  F  S+ ++L  +  RQ+
Sbjct: 791  ARRDYLSMKCCSLDAKDLDFHYKRMSLLFYKLNGFNEPTLKHVFLASLPEELQPDIQRQL 850

Query: 185  RNSNIGWNQITIGQLWQ*CNR-LQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKD-S 358
              SN+  + I++G+++Q     L K C Q +F      + +    AC K YL IKCK   
Sbjct: 851  TASNLVIDNISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKK 910

Query: 359  NCTCSITKKSH--KFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGY 532
            +C CS  KK H  KFK  +                                CF+C++KG+
Sbjct: 911  DCDCSPKKKRHFRKFKSPEFSSRPRRSRKPYRFFRKRSSSSKDSKRRKSSRCFICRKKGH 970

Query: 533  FAKYCPNKNKRQQFIIQLAPHIE-RKDYSDIEPLLE 637
            FAK CPNK  +    I+L  H++   DYS  +  LE
Sbjct: 971  FAKDCPNKRAKS---IRLVEHLQATTDYSPQQDELE 1003



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +3

Query: 780  PYPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVI 959
            P P I  +I+       IP   L+DTGA  +++NP IL  + W    + FKA NG  F  
Sbjct: 1048 PIPSIKLQILPSKFQRPIPAIGLIDTGAQRSMINPHILPPDSWTQSEEHFKAVNGKLFTT 1107

Query: 960  DKIIKS-IHIQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVPHLPFTQADIVYRGQTLP 1136
              I K  I IQ+FPN  I  KV+G  LP KD+ +GFD+L Q+ HL      I  +    P
Sbjct: 1108 SLITKKPIGIQIFPNCVIWTKVIGSTLPNKDILLGFDILHQIKHLQIIPHGIRVKSMFKP 1167

Query: 1137 WT 1142
            +T
Sbjct: 1168 FT 1169


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score =  110 bits (274), Expect = 2e-21
 Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
 Frame = +2

Query: 5    ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
            AR ++L+MKCC +  KDL+ HY+RM   FY +N  ++ +LK  F  S+ ++L  +  RQ+
Sbjct: 889  ARRDYLSMKCCSLDAKDLDFHYKRMSLLFYKLNGFNEPTLKHVFLASLPEELQPDIQRQL 948

Query: 185  RNSNIGWNQITIGQLWQ*CNR-LQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKD-S 358
              SN+  + I++G+++Q     L K C Q +F      + +    AC K YL IKCK   
Sbjct: 949  TASNLVIDNISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKK 1008

Query: 359  NCTCSITKKSH--KFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGY 532
            +C CS  KK H  KFK  +                                CF+C++KG+
Sbjct: 1009 DCDCSPKKKRHFRKFKSPEFSSRPRRSRKPYRFFRKRSSSSKDSKRRKSSRCFICRKKGH 1068

Query: 533  FAKYCPNKNKRQQFIIQLAPHIE-RKDYSDIEPLLE 637
            FAK CPNK  +    I+L  H++   DYS  +  LE
Sbjct: 1069 FAKDCPNKRAKS---IRLVEHLQATTDYSPQQDELE 1101



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +3

Query: 780  PYPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVI 959
            P P I  +I+       IP   L+DTGA  +++NP IL  + W    + FKA NG  F  
Sbjct: 1146 PIPSIKLQILPSKFQRPIPAIGLIDTGAQRSMINPHILPPDSWTQSEEHFKAVNGKLFTT 1205

Query: 960  DKIIKS-IHIQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVPHLPFTQADIVYRGQTLP 1136
              I K  I IQ+FPN  I  KV+G  LP KD+ +GFD+L Q+ HL      I  +    P
Sbjct: 1206 SLITKKPIGIQIFPNCVIWTKVIGSTLPNKDILLGFDILHQIKHLQIIPHGIRVKSMFKP 1265

Query: 1137 WT 1142
            +T
Sbjct: 1266 FT 1267


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score =  110 bits (274), Expect = 2e-21
 Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
 Frame = +2

Query: 5    ARTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQI 184
            AR ++L+MKCC +  KDL+ HY+RM   FY +N  ++ +LK  F  S+ ++L  +  RQ+
Sbjct: 902  ARRDYLSMKCCSLDAKDLDFHYKRMSLLFYKLNGFNEPTLKHVFLASLPEELQPDIQRQL 961

Query: 185  RNSNIGWNQITIGQLWQ*CNR-LQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKD-S 358
              SN+  + I++G+++Q     L K C Q +F      + +    AC K YL IKCK   
Sbjct: 962  TASNLVIDNISLGKIFQLAKTCLDKLCEQKQFFKDLLKDKEPFRSACKKPYLQIKCKQKK 1021

Query: 359  NCTCSITKKSH--KFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGY 532
            +C CS  KK H  KFK  +                                CF+C++KG+
Sbjct: 1022 DCDCSPKKKRHFRKFKSPEFSSRPRRSRKPYRFFRKRSSSSKDSKRRKSSRCFICRKKGH 1081

Query: 533  FAKYCPNKNKRQQFIIQLAPHIE-RKDYSDIEPLLE 637
            FAK CPNK  +    I+L  H++   DYS  +  LE
Sbjct: 1082 FAKDCPNKRAKS---IRLVEHLQATTDYSPQQDELE 1114



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +3

Query: 780  PYPLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVI 959
            P P I  +I+       IP   L+DTGA  +++NP IL  + W    + FKA NG  F  
Sbjct: 1159 PIPSIKLQILPSKFQRPIPAIGLIDTGAQRSMINPHILPPDSWTQSEEHFKAVNGKLFTT 1218

Query: 960  DKIIKS-IHIQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVPHLPFTQADIVYRGQTLP 1136
              I K  I IQ+FPN  I  KV+G  LP KD+ +GFD+L Q+ HL      I  +    P
Sbjct: 1219 SLITKKPIGIQIFPNCVIWTKVIGSTLPNKDILLGFDILHQIKHLQIIPHGIRVKSMFKP 1278

Query: 1137 WT 1142
            +T
Sbjct: 1279 FT 1280


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 67.0 bits (162), Expect(2) = 2e-21
 Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
 Frame = +3

Query: 786  PLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVIDK 965
            P    KI +      I V A  DTGA  ++M+P IL   YW P F+ F  A+    ++  
Sbjct: 1204 PQTEVKIYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGTADDG--ILTT 1261

Query: 966  IIKSIH---IQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVPHLPFTQAD-IVYRGQTL 1133
             +K+ H   I+ FP    T K+LG  +P KDL IGFD+  Q+ +     AD I ++ Q  
Sbjct: 1262 TVKTKHPITIEFFPGFKYTTKLLGSDIPGKDLLIGFDIYRQLNNKLRIGADGIRWKNQFK 1321

Query: 1134 PWTTNSNFFQ 1163
             +T     FQ
Sbjct: 1322 RYTEIPRLFQ 1331



 Score = 63.5 bits (153), Expect(2) = 2e-21
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 5/230 (2%)
 Frame = +2

Query: 8    RTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQIR 187
            R +   MKC     K +++H++RM K FY I    DISLKQAF +S+   L +     I+
Sbjct: 945  RRQIFEMKCLSYDRKKIDRHFQRMIKLFYHIG--GDISLKQAFISSLPPILSERISALIK 1002

Query: 188  NSNIGWNQITIGQLWQ*C-NRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIK----CK 352
                   Q+ +G + Q     L   C + KF  + +  ++ L  AC+K  L IK    C 
Sbjct: 1003 ERGTSVTQMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLIIKGDKGC- 1061

Query: 353  DSNCTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGY 532
               C  S  +K  +FK                                   CF C + G+
Sbjct: 1062 SGYCNPSRRRKYKRFKL-PSFKERDGRQYRKRRRFFRRSKTSKAMRQKPRSCFTCGKIGH 1120

Query: 533  FAKYCPNKNKRQQFIIQLAPHIERKDYSDIEPLLELTEKLSLDSLMVIAY 682
            F++ CP   K  + I ++  +       D+E +  + ++ S D+L  + +
Sbjct: 1121 FSRNCPQNKKSIKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEF 1170


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 66.6 bits (161), Expect(2) = 3e-21
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
 Frame = +3

Query: 786  PLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVIDK 965
            P    K+ +      I V A  DTGA  ++M+P IL   YW P F+ F  A+    ++  
Sbjct: 1205 PQTEVKVYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGTADDG--ILTT 1262

Query: 966  IIKSIH---IQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVPHLPFTQAD-IVYRGQTL 1133
             +K+ H   I+ FP    T K+LG  +P KDL IGFD+  Q+ +     AD I ++ Q  
Sbjct: 1263 TVKTKHPITIEFFPGFKYTTKLLGSDIPGKDLLIGFDIYRQLNNKLRIGADGIRWKNQFK 1322

Query: 1134 PWTTNSNFFQ 1163
             +T     FQ
Sbjct: 1323 RYTEIPRLFQ 1332



 Score = 63.5 bits (153), Expect(2) = 3e-21
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 5/230 (2%)
 Frame = +2

Query: 8    RTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQIR 187
            R +   MKC     K +++H++RM K FY I    DISLKQAF +S+   L +     I+
Sbjct: 946  RRQIFEMKCLSYDRKKIDRHFQRMIKLFYHIG--GDISLKQAFISSLPPILSERISALIK 1003

Query: 188  NSNIGWNQITIGQLWQ*C-NRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIK----CK 352
                   Q+ +G + Q     L   C + KF  + +  ++ L  AC+K  L IK    C 
Sbjct: 1004 ERGTSVTQMHVGDIRQTAFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLIIKGDKGC- 1062

Query: 353  DSNCTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGY 532
               C  S  +K  +FK                                   CF C + G+
Sbjct: 1063 SGYCNPSRRRKYKRFKL-PSFKERDGRQYRKRRRFFRKSKTSKAMRQKPRSCFTCGKIGH 1121

Query: 533  FAKYCPNKNKRQQFIIQLAPHIERKDYSDIEPLLELTEKLSLDSLMVIAY 682
            F++ CP   K  + I ++  +       D+E +  + ++ S D+L  + +
Sbjct: 1122 FSRNCPQNKKSIKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEF 1171


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 66.6 bits (161), Expect(2) = 3e-21
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
 Frame = +3

Query: 786  PLIYAKIISDHHSLAIPVTALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVIDK 965
            P    K+ +      I V A  DTGA  ++M+P IL   YW P F+ F  A+    ++  
Sbjct: 1205 PQTEVKVYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGTADDG--ILTT 1262

Query: 966  IIKSIH---IQLFPNLTITRKVLGFKLPQKDLFIGFDLLSQVPHLPFTQAD-IVYRGQTL 1133
             +K+ H   I+ FP    T K+LG  +P KDL IGFD+  Q+ +     AD I ++ Q  
Sbjct: 1263 TVKTKHPITIEFFPGFKYTTKLLGSDIPGKDLLIGFDIYRQLNNKLRIGADGIRWKNQFK 1322

Query: 1134 PWTTNSNFFQ 1163
             +T     FQ
Sbjct: 1323 RYTEIPRLFQ 1332



 Score = 63.2 bits (152), Expect(2) = 3e-21
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 5/230 (2%)
 Frame = +2

Query: 8    RTEFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQIR 187
            R +   MKC     K +++H++RM K FY I    DISLKQAF +S+   L +     I+
Sbjct: 946  RRQIFEMKCLSYDRKKIDRHFQRMIKLFYHIG--GDISLKQAFISSLPPILSERISALIK 1003

Query: 188  NSNIGWNQITIGQLWQ-*CNRLQKNCVQTKFS*KYQTNTKILGPACSKKYLSIK----CK 352
                   Q+ +G + Q     L   C + KF  + +  ++ L  AC+K  L IK    C 
Sbjct: 1004 ERGTSGTQMHVGDIRQTGFYVLDDLCSKRKFFNQMKKMSRDLEKACTKSDLIIKGDKGC- 1062

Query: 353  DSNCTCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGY 532
               C  S  +K  +FK                                   CF C + G+
Sbjct: 1063 SGYCNPSRRRKYKRFKL-PSFKERDGRQYRKRRRFFRKSKTSKAMRQKPRSCFTCGKIGH 1121

Query: 533  FAKYCPNKNKRQQFIIQLAPHIERKDYSDIEPLLELTEKLSLDSLMVIAY 682
            F++ CP   K  + I ++  +       D+E +  + ++ S D+L  + +
Sbjct: 1122 FSRNCPQNKKSIKLISEIQKYTGIDIEDDLESVFSIEDEPSEDTLFSLEF 1171


>ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutrema salsugineum]
            gi|557099163|gb|ESQ39527.1| hypothetical protein
            EUTSA_v10001103mg [Eutrema salsugineum]
          Length = 1135

 Score =  103 bits (256), Expect = 2e-19
 Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 8/215 (3%)
 Frame = +2

Query: 14   EFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQIRNS 193
            EF   KCC ++ +DL KH+ER  +R+Y +N +++ SLKQ   +S+   L  +T   IR+ 
Sbjct: 882  EFFTAKCCSLKKRDLAKHFERQTRRYYALNGLNNPSLKQVHLSSLDDYLSQQTKLYIRDQ 941

Query: 194  NIGWNQITIGQLWQ*CNR-LQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKDS--NC 364
                  I+IGQ+ Q   R L K C Q +F  ++   +K L   C++  LSIKC  S   C
Sbjct: 942  GETVEDISIGQIQQYVFRTLDKLCKQKEFWMEFMDKSKQLSRICARPDLSIKCLKSKKTC 1001

Query: 365  TCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAKY 544
            +C    KS +F+ +                                 CFLC+++G+FAK 
Sbjct: 1002 SCDDRSKSRRFRKAS--------HKRFNKFRRKRFFRKKRSFKKTTKCFLCRKEGHFAKN 1053

Query: 545  CPNKN-KRQQFII----QLAPHIERKDYSDIEPLL 634
            CPNK+ K++Q++I    ++AP ++  D +D+E +L
Sbjct: 1054 CPNKSKKKKQYLISSISKIAPDLD-FDNNDLESVL 1087


>ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, partial [Eutrema
           salsugineum] gi|557104462|gb|ESQ44802.1| hypothetical
           protein EUTSA_v10003417mg, partial [Eutrema salsugineum]
          Length = 988

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 6/213 (2%)
 Frame = +2

Query: 14  EFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQIRNS 193
           EF   KCC ++ +DL KH+ER  +R+Y +N +++ SLKQ   +SI   L  +T   IR+ 
Sbjct: 243 EFFTAKCCSLKKRDLAKHFERQTRRYYALNGLNNPSLKQVHLSSIDDYLSQQTKLYIRDQ 302

Query: 194 NIGWNQITIGQLWQ*CNR-LQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKDSNCTC 370
                  +IG + Q   R L K C Q +F  ++   +K L   C++  LSIKC  S  TC
Sbjct: 303 GQTVEDNSIGPIQQYVFRTLDKLCKQKEFWMEFMDKSKQLSRICARPNLSIKCSKSKKTC 362

Query: 371 SITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAKYCP 550
           S   +S  +++                                  CFLC+++G+FAK CP
Sbjct: 363 SCEDRSKSWRF------RKTSHKRFNKFRRKRFCRKKRSFKKTTKCFLCRKEGHFAKNCP 416

Query: 551 NKN-KRQQFII----QLAPHIERKDYSDIEPLL 634
           NK+ K++Q++I    ++AP ++  D  D+E +L
Sbjct: 417 NKSKKKKQYLISSISKIAPDLD-FDNHDLESVL 448



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 32/75 (42%), Positives = 44/75 (58%)
 Frame = +3

Query: 843  ALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVIDKIIKSIHIQLFPNLTITRKV 1022
            A +DTGA +T+MNP IL  + W P  + F+ AN     +    K + I+LFP   IT +V
Sbjct: 516  AFIDTGAYTTIMNPKILPTSMWLPHQQEFRVANSGSLTVKLKSKPVTIELFPGCQITTEV 575

Query: 1023 LGFKLPQKDLFIGFD 1067
            LG   P KDL +G+D
Sbjct: 576  LGSSAPGKDLILGWD 590


>ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, partial [Eutrema
           salsugineum] gi|557106803|gb|ESQ47118.1| hypothetical
           protein EUTSA_v10028343mg, partial [Eutrema salsugineum]
          Length = 1104

 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
 Frame = +2

Query: 14  EFLNMKCCLVRLKDLEKHYERMYKRFYIINQIDDISLKQAFDNSILKKLVDETMRQIRNS 193
           EF   KCC ++ +DL KH+ER  +R+Y +N +++ SLK+   +SI   L  +T   IR+ 
Sbjct: 376 EFFTAKCCSLKKRDLAKHFERQTRRYYALNGLNNPSLKKVHLSSIDDYLSQQTKLYIRDQ 435

Query: 194 NIGWNQITIGQLWQ*CNR-LQKNCVQTKFS*KYQTNTKILGPACSKKYLSIKCKDS--NC 364
                 I+IGQ+ Q   R L K C Q +F  ++   +K L   C++  LSI C  S   C
Sbjct: 436 GQTVEDISIGQIQQYVFRTLDKLCKQKEFWMEFMDKSKQLSRICARPDLSINCSKSKKTC 495

Query: 365 TCSITKKSHKFKYSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFLCKQKGYFAKY 544
           +C   +KS +F+                                   CFLC+++G+FAK 
Sbjct: 496 SCDDRRKSRRFR--------KPSHKRFNKFRRKRFFRKKRSFKKTTKCFLCRKEGHFAKN 547

Query: 545 CPNKN-KRQQFII----QLAPHIERKDYSDIEPLL 634
           CPNK+ K++Q++I    ++ P ++  D  D+E +L
Sbjct: 548 CPNKSKKKKQYLISSISKIVPDLD-FDSHDLESVL 581



 Score = 66.6 bits (161), Expect(2) = 1e-09
 Identities = 32/75 (42%), Positives = 45/75 (60%)
 Frame = +3

Query: 843  ALLDTGATSTVMNPDILRQNYWNPCFKVFKAANGNKFVIDKIIKSIHIQLFPNLTITRKV 1022
            A +DTGA +T+MNP IL  + W P  + F+ AN     ++   K + I+LFP   IT +V
Sbjct: 650  AFIDTGAYTTIMNPKILPSSMWLPHQQEFRVANSGSLTVNLKSKPVTIELFPGCQITTEV 709

Query: 1023 LGFKLPQKDLFIGFD 1067
            LG   P KDL +G+D
Sbjct: 710  LGSSAPGKDLILGWD 724



 Score = 24.3 bits (51), Expect(2) = 1e-09
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 1172 VHRILSS*I--IRAEIITRSCAQFHSEFLSK 1258
            V R++S     I+ EI   SCA  H++FL K
Sbjct: 760  VERVISQDFEKIKEEIAIVSCADSHTDFLKK 790