BLASTX nr result

ID: Rauwolfia21_contig00035856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00035856
         (357 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004891619.1| unnamed protein product (chloroplast) [Nicot...    69   7e-10
ref|NP_054513.1| hypothetical protein NitaCp037 [Nicotiana tabac...    68   1e-09
ref|YP_398878.1| hypothetical protein NitoCp045 [Nicotiana tomen...    67   3e-09

>ref|YP_004891619.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|347453920|gb|AEO95578.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347454031|gb|AEO95688.1| hypothetical protein
           [synthetic construct]
          Length = 99

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 39/78 (50%), Positives = 48/78 (61%)
 Frame = -1

Query: 234 QSMKFIFQKHHQRVGFFETAEKGFLI*TKKRV*FLRTQRAFPLNQTNKEGNPVEFLCFHV 55
           + M+F+ +K +    F+   EK  +I          +    P NQTNKEGNPVEFL FHV
Sbjct: 6   RKMEFLKRKRNP---FYHLDEKNIMI-------LKNSTGPSPSNQTNKEGNPVEFLRFHV 55

Query: 54  YNSIHSITRGMNPIRNMN 1
            +SIHSIT GMNPIRNMN
Sbjct: 56  DDSIHSITTGMNPIRNMN 73


>ref|NP_054513.1| hypothetical protein NitaCp037 [Nicotiana tabacum]
           gi|78102550|ref|YP_358691.1| hypothetical protein
           NisyCp046 [Nicotiana sylvestris]
           gi|11846|emb|CAA77366.1| hypothetical protein [Nicotiana
           tabacum] gi|77799577|dbj|BAE46666.1| hypothetical
           protein [Nicotiana sylvestris] gi|225214|prf||1211235AV
           ORF 99A
          Length = 99

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/78 (50%), Positives = 48/78 (61%)
 Frame = -1

Query: 234 QSMKFIFQKHHQRVGFFETAEKGFLI*TKKRV*FLRTQRAFPLNQTNKEGNPVEFLCFHV 55
           + M+F+ +K +    F+   EK  +I          +    P NQTNKEGN VEFL FHV
Sbjct: 6   RKMEFLKRKRNP---FYHLDEKNIMI-------LKNSTGPSPSNQTNKEGNSVEFLRFHV 55

Query: 54  YNSIHSITRGMNPIRNMN 1
            +SIHSITRGMNPIRNMN
Sbjct: 56  DDSIHSITRGMNPIRNMN 73


>ref|YP_398878.1| hypothetical protein NitoCp045 [Nicotiana tomentosiformis]
           gi|80750940|dbj|BAE48016.1| hypothetical protein
           [Nicotiana tomentosiformis]
          Length = 99

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/78 (48%), Positives = 47/78 (60%)
 Frame = -1

Query: 234 QSMKFIFQKHHQRVGFFETAEKGFLI*TKKRV*FLRTQRAFPLNQTNKEGNPVEFLCFHV 55
           + M+F+ +K +    F+   EK  +I          +    P NQT KEGNPVEFL FHV
Sbjct: 6   RKMEFLKRKRNP---FYHLDEKNIMI-------LKNSPGPSPSNQTKKEGNPVEFLRFHV 55

Query: 54  YNSIHSITRGMNPIRNMN 1
            +SIHSIT GMNPIRNMN
Sbjct: 56  DDSIHSITTGMNPIRNMN 73


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