BLASTX nr result
ID: Rauwolfia21_contig00035770
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00035770
(411 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW25230.1| hypothetical protein PHAVU_003G018200g [Phaseolus... 63 5e-08
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 59 7e-07
ref|XP_002314781.2| metallo-beta-lactamase family protein [Popul... 59 9e-07
ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation spec... 59 9e-07
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 58 1e-06
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 58 1e-06
ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutr... 58 1e-06
gb|EPS71695.1| hypothetical protein M569_03060, partial [Genlise... 58 1e-06
gb|EMS55526.1| Cleavage and polyadenylation specificity factor s... 58 1e-06
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 57 3e-06
ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citr... 57 3e-06
ref|XP_006828470.1| hypothetical protein AMTR_s00060p00141700 [A... 57 3e-06
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 57 3e-06
ref|XP_002975487.1| hypothetical protein SELMODRAFT_52099 [Selag... 56 4e-06
ref|XP_002978727.1| hypothetical protein SELMODRAFT_109555 [Sela... 56 4e-06
ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arab... 56 4e-06
ref|NP_178282.2| cleavage and polyadenylation specificity factor... 56 4e-06
gb|AAN87883.1| FEG protein [Arabidopsis thaliana] 56 4e-06
gb|AAD12712.1| putative cleavage and polyadenylation specifity f... 56 4e-06
gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus pe... 56 6e-06
>gb|ESW25230.1| hypothetical protein PHAVU_003G018200g [Phaseolus vulgaris]
Length = 537
Score = 62.8 bits (151), Expect = 5e-08
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 1 QDFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMV 165
QDF S +TCI T++ H+G T C Y Y+TYPT KALAPL+LEDY K+MV
Sbjct: 54 QDFNSAITCIIITHFHLDHVGALAYFTEVCGYSGPIYMTYPT--KALAPLMLEDYRKVMV 111
Query: 166 DRRGXXXXXXXXXXXXCREKVFTPELK 246
DRRG C +KV +L+
Sbjct: 112 DRRGEEELFSSNQIAECMKKVTAVDLR 138
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTC--ITNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF S L C IT++ H+G T C Y+ Y+TYPT KAL+PL+LEDY K+MVD
Sbjct: 55 DFDSALHCVIITHFHLDHVGALPYFTEVCGYNGPVYMTYPT--KALSPLMLEDYRKVMVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C KV +LK
Sbjct: 113 RRGEEEQFTADHIKQCLNKVIAVDLK 138
>ref|XP_002314781.2| metallo-beta-lactamase family protein [Populus trichocarpa]
gi|550329586|gb|EEF00952.2| metallo-beta-lactamase
family protein [Populus trichocarpa]
Length = 625
Score = 58.5 bits (140), Expect = 9e-07
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Frame = +1
Query: 1 QDFGSYLTC--ITNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMV 165
+DF L C IT++ H+G T C Y+ Y+TYPT KALAPL+LED+ K++V
Sbjct: 54 RDFDHSLDCVIITHFHLDHVGALPYFTEVCGYNGPIYMTYPT--KALAPLMLEDFRKVLV 111
Query: 166 DRRGXXXXXXXXXXXXCREKVFTPELK 246
DRRG C EKV +LK
Sbjct: 112 DRRGEEEQFTSLHISQCMEKVIAVDLK 138
>ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Brachypodium distachyon]
Length = 553
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTC--ITNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF S ++C IT++ HIG T C Y Y+TYPT KALAPL+LEDY K+MVD
Sbjct: 59 DFTSAISCVIITHFHLDHIGALPYFTEVCGYHGPIYMTYPT--KALAPLMLEDYRKVMVD 116
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
+RG C +KV +LK
Sbjct: 117 QRGEEEQYSYEDILRCMKKVIPVDLK 142
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + L+CI T++ HIG T C Y+ Y+TYPT KALAPL+LEDY +++VD
Sbjct: 55 DFDNALSCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPT--KALAPLMLEDYRRVLVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 113 RRGEKEQFSSENITDCMKKVTAVDLK 138
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + L+CI T++ HIG T C Y+ Y+TYPT KALAPL+LEDY +++VD
Sbjct: 55 DFDNALSCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPT--KALAPLMLEDYRRVLVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 113 RRGEKEQFSSENIADCMKKVTAVDLK 138
>ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutrema salsugineum]
gi|557092497|gb|ESQ33144.1| hypothetical protein
EUTSA_v10005303mg [Eutrema salsugineum]
Length = 617
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + ++CI T++ H+G T C Y+ Y++YPT KAL+PL+LEDY ++MVD
Sbjct: 55 DFDNAISCIIITHFHMDHVGALPYFTEVCGYNGPVYMSYPT--KALSPLMLEDYRRVMVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C EKV +LK
Sbjct: 113 RRGEEELFTTAHIANCMEKVIALDLK 138
>gb|EPS71695.1| hypothetical protein M569_03060, partial [Genlisea aurea]
Length = 470
Score = 57.8 bits (138), Expect = 1e-06
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + ++CI T++ HIG T C Y+ Y+TYPT KAL PL+LEDY K+MVD
Sbjct: 50 DFTNSISCIIITHFHLDHIGALPYFTQICGYNGPIYMTYPT--KALGPLMLEDYRKVMVD 107
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 108 RRGEKELFTSEDILHCMKKVTAVDLK 133
>gb|EMS55526.1| Cleavage and polyadenylation specificity factor subunit 3-II
[Triticum urartu]
Length = 540
Score = 57.8 bits (138), Expect = 1e-06
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTC--ITNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF S ++C IT++ HIG T C Y Y+TYPT KALAPL+LEDY K+MVD
Sbjct: 58 DFTSAISCVVITHFHLDHIGALPYFTEVCGYHGPIYMTYPT--KALAPLMLEDYRKVMVD 115
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RG C +KV +LK
Sbjct: 116 HRGEEEQYSYEDIQNCMKKVIPLDLK 141
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + + CI T++ HIG T C Y+ Y+TYPT +ALAP++LEDY K++VD
Sbjct: 55 DFNNAIDCIVITHFHLDHIGALPFFTEICGYNGPIYMTYPT--RALAPIMLEDYRKVLVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 113 RRGEVEQFTSDHIAECMKKVIAVDLK 138
>ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citrus clementina]
gi|557550770|gb|ESR61399.1| hypothetical protein
CICLE_v10014563mg [Citrus clementina]
Length = 646
Score = 57.0 bits (136), Expect = 3e-06
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + + CI T++ HIG T C Y+ Y+TYPT +ALAP++LEDY K++VD
Sbjct: 55 DFNNAIDCIVITHFHLDHIGALPFFTEICGYNGPIYMTYPT--RALAPIMLEDYRKVLVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 113 RRGEVEQFTSDHIAECMKKVIAVDLK 138
>ref|XP_006828470.1| hypothetical protein AMTR_s00060p00141700 [Amborella trichopoda]
gi|548833218|gb|ERM95886.1| hypothetical protein
AMTR_s00060p00141700 [Amborella trichopoda]
Length = 716
Score = 57.0 bits (136), Expect = 3e-06
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + +TCI T++ HIG T Y Y+TYPT KALAPL+LEDY K+MVD
Sbjct: 55 DFDTAITCIIITHFHLDHIGALPYFTEVLGYQGPIYMTYPT--KALAPLMLEDYRKVMVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 113 RRGEKEQFTAQQIQGCMKKVTAVDLK 138
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 56.6 bits (135), Expect = 3e-06
Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Frame = +1
Query: 19 LTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVDRRGXX 183
LTCI T++ HIG T C Y+ Y+TYPT KALAPL+LEDY K+MV+RRG
Sbjct: 55 LTCIVITHFHLDHIGALPYFTQVCGYNGPIYMTYPT--KALAPLMLEDYRKIMVERRGEE 112
Query: 184 XXXXXXXXXXCREKVFTPELK 246
C +KV LK
Sbjct: 113 EQFTSEHIAECMKKVIAVNLK 133
>ref|XP_002975487.1| hypothetical protein SELMODRAFT_52099 [Selaginella moellendorffii]
gi|300156488|gb|EFJ23116.1| hypothetical protein
SELMODRAFT_52099 [Selaginella moellendorffii]
Length = 517
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + C+ T++ H+G T C Y+ Y+TYPT KALAP++LEDY K+MVD
Sbjct: 47 DFTHEIDCVIVTHFHLDHVGALPYFTEVCGYEGPVYMTYPT--KALAPIMLEDYRKIMVD 104
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +L+
Sbjct: 105 RRGEEEQFSTLHIQQCMKKVIAVDLR 130
>ref|XP_002978727.1| hypothetical protein SELMODRAFT_109555 [Selaginella moellendorffii]
gi|300153536|gb|EFJ20174.1| hypothetical protein
SELMODRAFT_109555 [Selaginella moellendorffii]
Length = 522
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + C+ T++ H+G T C Y+ Y+TYPT KALAP++LEDY K+MVD
Sbjct: 52 DFTHEIDCVIVTHFHLDHVGALPYFTEVCGYEGPVYMTYPT--KALAPIMLEDYRKIMVD 109
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +L+
Sbjct: 110 RRGEEEQFSTLHIQQCMKKVIAVDLR 135
>ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata] gi|297320925|gb|EFH51346.1| hypothetical protein
ARALYDRAFT_322516 [Arabidopsis lyrata subsp. lyrata]
Length = 819
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + ++CI T++ H+G T C Y+ Y++YPT KAL+PL+LEDY ++MVD
Sbjct: 55 DFDNAISCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPT--KALSPLMLEDYRRVMVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 113 RRGEDELFTTAHIANCMKKVIAIDLK 138
>ref|NP_178282.2| cleavage and polyadenylation specificity factor subunit 3-II
[Arabidopsis thaliana]
gi|332278175|sp|Q8GUU3.2|CPS3B_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 3-II; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit II; Short=AtCPSF73-II;
Short=CPSF 73 kDa subunit II; AltName: Full=Protein
EMBRYO SAC DEVELOPMENT ARREST 26
gi|62320470|dbj|BAD94982.1| putative cleavage and
polyadenylation specifity factor [Arabidopsis thaliana]
gi|330250395|gb|AEC05489.1| cleavage and polyadenylation
specificity factor subunit 3-II [Arabidopsis thaliana]
Length = 613
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + ++CI T++ H+G T C Y+ Y++YPT KAL+PL+LEDY ++MVD
Sbjct: 55 DFDNAISCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPT--KALSPLMLEDYRRVMVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 113 RRGEEELFTTTHIANCMKKVIAIDLK 138
>gb|AAN87883.1| FEG protein [Arabidopsis thaliana]
Length = 613
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + ++CI T++ H+G T C Y+ Y++YPT KAL+PL+LEDY ++MVD
Sbjct: 55 DFDNAISCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPT--KALSPLMLEDYRRVMVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 113 RRGEEELFTTTHIANCMKKVIAIDLK 138
>gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
DF + ++CI T++ H+G T C Y+ Y++YPT KAL+PL+LEDY ++MVD
Sbjct: 55 DFDNAISCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPT--KALSPLMLEDYRRVMVD 112
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 113 RRGEEELFTTTHIANCMKKVIAIDLK 138
>gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
Length = 658
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Frame = +1
Query: 4 DFGSYLTCI--TNYQGVHIGES---TI*CVYDSANYLTYPTNTKALAPLLLEDYCKMMVD 168
+F LTCI T++ H+G T C Y Y+TYPT KALAP++LEDY K+MV+
Sbjct: 58 NFDHALTCIIITHFHLDHVGALPYFTEVCGYRGPIYMTYPT--KALAPIMLEDYRKVMVE 115
Query: 169 RRGXXXXXXXXXXXXCREKVFTPELK 246
RRG C +KV +LK
Sbjct: 116 RRGEEEQFSSDHIAECMKKVIPVDLK 141