BLASTX nr result
ID: Rauwolfia21_contig00035533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00035533
(262 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 144 9e-33
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera] 144 9e-33
gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily p... 138 7e-31
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi... 137 1e-30
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr... 137 1e-30
ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containi... 136 3e-30
gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis] 135 4e-30
gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus pe... 135 4e-30
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,... 134 1e-29
ref|XP_002324235.2| pentatricopeptide repeat-containing family p... 134 2e-29
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t... 120 1e-25
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 119 4e-25
gb|AEP33771.1| organelle transcript processing 82, partial [Thla... 119 6e-25
ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containi... 118 9e-25
gb|ESW26970.1| hypothetical protein PHAVU_003G162300g [Phaseolus... 117 1e-24
ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23
gb|AEP33760.1| organelle transcript processing 82, partial [Caps... 113 2e-23
gb|AEP33759.1| organelle transcript processing 82, partial [Bras... 112 4e-23
ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutr... 112 5e-23
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps... 112 7e-23
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 144 bits (364), Expect = 9e-33
Identities = 64/87 (73%), Positives = 77/87 (88%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWNVMIGGY+ M+ YKEAL +FR+MQQ NVEP+DVTFV+ILPACA+LGALDLGKWIH+
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YIDK+F N +LWTSLI MYAKCG+
Sbjct: 390 YIDKKFLGLTNTSLWTSLIDMYAKCGN 416
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +1
Query: 4 VSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHSY 183
VSWN MI GY Q +++EAL F++M++ NV P++ T V +L ACA G+L+LG W+ S+
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289
Query: 184 IDKQFYDFQNPALWTSLIHMYAKCG 258
I+ N L +LI MY+KCG
Sbjct: 290 IEDHGLG-SNLRLVNALIDMYSKCG 313
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGK 168
L SWN MI G AL +FRQM+ EPDD+TFV +L AC+H G ++LG+
Sbjct: 432 LGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGR 487
>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 144 bits (364), Expect = 9e-33
Identities = 64/87 (73%), Positives = 77/87 (88%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWNVMIGGY+ M+ YKEAL +FR+MQQ NVEP+DVTFV+ILPACA+LGALDLGKWIH+
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YIDK+F N +LWTSLI MYAKCG+
Sbjct: 390 YIDKKFLGLTNTSLWTSLIDMYAKCGN 416
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +1
Query: 4 VSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHSY 183
VSWN MI GY Q +++EAL F++M++ NV P++ T V +L ACA G+L+LG W+ S+
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289
Query: 184 IDKQFYDFQNPALWTSLIHMYAKCG 258
I+ N L +LI MY+KCG
Sbjct: 290 IEDHGLG-SNLRLVNALIDMYSKCG 313
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGK 168
L SWN MI G AL +FRQM+ EPDD+TFV +L AC+H G ++LG+
Sbjct: 432 LGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGR 487
>gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 847
Score = 138 bits (348), Expect = 7e-31
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWNVMIGGYT MS YKEAL +FR+M + N+EP DVTF+++LPACA+LGALDLGKWIH+
Sbjct: 386 VISWNVMIGGYTHMSYYKEALGLFRRMLRSNIEPSDVTFLSVLPACANLGALDLGKWIHA 445
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YIDK F + N +LWTSLI MYAKCGS
Sbjct: 446 YIDKNFQNSTNISLWTSLIDMYAKCGS 472
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/86 (45%), Positives = 56/86 (65%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY Q +++EAL F +M NV P++ T V++L ACA G+L+LG W+ S
Sbjct: 285 VVSWNAMIAGYAQTGQHEEALAFFEEMIGANVVPNESTLVSVLSACAQSGSLELGTWVRS 344
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
+I++ N L +LI MY+KCG
Sbjct: 345 WINEHGLG-SNIHLANALIDMYSKCG 369
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L SWN MI G +AL +F QM ++PDD+TFV +L AC H G LDLG+ S
Sbjct: 488 LASWNAMISGLAMHGLADKALELFSQMMGGGLKPDDITFVGVLSACTHAGLLDLGRQYFS 547
Query: 181 YIDKQF 198
+ +++
Sbjct: 548 SMVQEY 553
>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Citrus sinensis]
Length = 736
Score = 137 bits (346), Expect = 1e-30
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWNVMIGGYT S YKEAL +FRQM Q N+EP+DVTF+++LPACA+LGALDLGKWIH+
Sbjct: 328 VISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHA 387
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YIDK N +LWTSLI MYAKCG+
Sbjct: 388 YIDKNHQKLNNVSLWTSLIDMYAKCGN 414
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY Q +Y+EAL IF+++++ N P++ T V +L ACAH+G+L+LG W+ S
Sbjct: 227 VVSWNAMIAGYAQSGRYEEALAIFQKIREENFVPNESTVVTVLSACAHMGSLELGNWVCS 286
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
I+ N + +LI MY+KCG
Sbjct: 287 LIEGHGLG-SNLHVTNALIDMYSKCG 311
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L SWN MI G K +AL++F +M ++PDD+TFV +L AC H G LD+G+
Sbjct: 430 LASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGR---Q 486
Query: 181 YIDKQFYDFQ 210
Y + D++
Sbjct: 487 YFNAMIQDYK 496
>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
gi|557554208|gb|ESR64222.1| hypothetical protein
CICLE_v10010823mg [Citrus clementina]
Length = 736
Score = 137 bits (346), Expect = 1e-30
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWNVMIGGYT S YKEAL +FRQM Q N+EP+DVTF+++LPACA+LGALDLGKWIH+
Sbjct: 328 VISWNVMIGGYTHTSDYKEALMLFRQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHA 387
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YIDK N +LWTSLI MYAKCG+
Sbjct: 388 YIDKNHQKLNNVSLWTSLIDMYAKCGN 414
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY Q +Y+EAL IF+++++ N P++ T V +L ACAH+G+L+LG W+ S
Sbjct: 227 VVSWNAMIAGYAQSGRYEEALAIFQKIREENFVPNESTVVTVLSACAHMGSLELGNWVCS 286
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
I+ N + +LI MY+KCG
Sbjct: 287 LIEGHGLG-SNLHVTNALIDMYSKCG 311
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L SWN MI G K +AL++F +M ++PDD+TFV +L AC H G LD+G+
Sbjct: 430 LASWNAMISGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGR---Q 486
Query: 181 YIDKQFYDFQ 210
Y + D++
Sbjct: 487 YFNAMIQDYK 496
>ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 731
Score = 136 bits (342), Expect = 3e-30
Identities = 60/87 (68%), Positives = 73/87 (83%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
LVSWNVMIGGYT YK+AL++F +MQQ ++P+DVT ++ILPACAHLGALDLGKWIH
Sbjct: 323 LVSWNVMIGGYTHTGYYKDALSVFHRMQQEVIDPNDVTLLSILPACAHLGALDLGKWIHV 382
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YIDK + QN +LWTSLI+MYAKCG+
Sbjct: 383 YIDKHYQHLQNTSLWTSLINMYAKCGA 409
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY Q+ +++EAL +F +M+ NVEP T +++L ACA +G L LG W+ S
Sbjct: 222 VVSWNAMISGYAQVGRFEEALVLFEEMRNVNVEPSVSTLLSVLSACARVGELKLGNWVRS 281
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
+I+ N L +LI MYAKCG
Sbjct: 282 WIEDHGLGL-NIRLVNALIDMYAKCG 306
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGK 168
L S+NVMI G EAL +FR+M + +++PDD+TFV++L AC H G +DLG+
Sbjct: 425 LASYNVMISGLAMHGDAYEALELFRKMTEESMKPDDITFVSVLSACNHAGLVDLGR 480
>gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis]
Length = 737
Score = 135 bits (341), Expect = 4e-30
Identities = 61/87 (70%), Positives = 74/87 (85%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN+MIGGYT MS YKEAL +FR M + +VEP+DVT + +LPACAHLGALDLGKWIH+
Sbjct: 329 VVSWNIMIGGYTHMSDYKEALALFRLMLRSDVEPNDVTLLAVLPACAHLGALDLGKWIHA 388
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YIDK+F+ F N +LWTSLI MYAK G+
Sbjct: 389 YIDKKFHTFTNNSLWTSLIDMYAKSGN 415
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/87 (40%), Positives = 58/87 (66%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+V+WN +I GYTQ +++ EAL F++M + NV+P++ +FV IL ACA G L+ G W+ S
Sbjct: 228 VVAWNAIISGYTQSAQFDEALAFFKEMVKANVKPNESSFVVILSACAQSGNLESGNWVRS 287
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
+I + + + +L+ MY+KCG+
Sbjct: 288 WIGDRGLG-SSLRIVNALVDMYSKCGN 313
>gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
Length = 714
Score = 135 bits (341), Expect = 4e-30
Identities = 60/87 (68%), Positives = 71/87 (81%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWNVMIGGYT S YKEAL +FR M + N +P+DVTF+ ILPAC+HLGALDLGKWIH+
Sbjct: 306 VISWNVMIGGYTHKSHYKEALALFRLMLRSNADPNDVTFLGILPACSHLGALDLGKWIHA 365
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YIDK F N +LWTSLI MYAKCG+
Sbjct: 366 YIDKNFQSLTNTSLWTSLIDMYAKCGN 392
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/87 (47%), Positives = 60/87 (68%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY Q +++EAL +F +M++ NV P++ T V +L ACA G+L+LGKW+ S
Sbjct: 205 VVSWNAMISGYAQSGRFEEALALFSEMRKANVSPNESTMVVVLSACAQSGSLELGKWVGS 264
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
+I+ + N L +LI MYAKCG+
Sbjct: 265 WIENRGLG-SNLRLVNALIDMYAKCGA 290
>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 486
Score = 134 bits (338), Expect = 1e-29
Identities = 62/87 (71%), Positives = 73/87 (83%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWNVMIGGYT +S YKEAL +FRQM Q NVEP+DVT ++ILPACA+LGAL LGKWIH+
Sbjct: 322 VISWNVMIGGYTHLSCYKEALGLFRQMLQSNVEPNDVTLLSILPACANLGALGLGKWIHA 381
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YIDK + N ALWTSLI MYAKCG+
Sbjct: 382 YIDKNMKNLANNALWTSLIDMYAKCGN 408
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/86 (44%), Positives = 57/86 (66%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GYTQ +++EAL F +M + NV P+ T +++L ACA G+L +G W+ S
Sbjct: 221 VVSWNAMIAGYTQSGRFEEALIFFEEMLRANVTPNMSTLLSVLSACAQSGSLKMGNWVSS 280
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
+I++ + N + +LI MYAKCG
Sbjct: 281 WIEEHGLE-SNIKVMNALIDMYAKCG 305
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L SWN MI G+ + A+++F +M + + PD++TF+ +L AC H G LDLG H
Sbjct: 424 LASWNAMISGFAMHGQADLAISLFSRMTKEGLVPDNITFIGVLSACNHAGLLDLGHINHF 483
Query: 181 YID 189
+ID
Sbjct: 484 HID 486
>ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317719|gb|EEF02800.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 736
Score = 134 bits (336), Expect = 2e-29
Identities = 61/87 (70%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWNVMIGGYT MS YKEAL +FR+M Q N++P+DVTF++ILPACA+LGALDLGKW+H+
Sbjct: 327 VVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHA 386
Query: 181 YIDKQFYDFQNP-ALWTSLIHMYAKCG 258
Y+DK +N ALWTSLI MYAKCG
Sbjct: 387 YVDKNMKSMKNTVALWTSLIDMYAKCG 413
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLG-ALDLGKWIH 177
+VSWN MI GY Q + +EA+ F +M++ V P+ T +++L ACA G +L LG W+
Sbjct: 225 VVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVR 284
Query: 178 SYIDKQFYDFQNPALWTSLIHMYAKCG 258
S+I+ + N L LI MY KCG
Sbjct: 285 SWIEDRGLG-SNIRLVNGLIDMYVKCG 310
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L +WN MI G+ AL +F +M PDD+TFV +L AC H G L LG+
Sbjct: 430 LATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGR---R 486
Query: 181 YIDKQFYDFQ-NPAL--WTSLIHMYAKCG 258
Y D++ +P L + +I ++ + G
Sbjct: 487 YFSSMIQDYKVSPKLPHYGCMIDLFGRAG 515
>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 738
Score = 120 bits (302), Expect = 1e-25
Identities = 54/86 (62%), Positives = 68/86 (79%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWN MIGGY+ +S Y+EAL +F M + NV+P+DVTF+ IL ACA LGALDLGKW+H+
Sbjct: 329 VISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHA 388
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
YIDK + N +LWTSLI MYAKCG
Sbjct: 389 YIDKNLRNSSNASLWTSLIDMYAKCG 414
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/86 (44%), Positives = 53/86 (61%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY Q +++EA+ F +MQ+ NV P+ T V +L AC H + +LGKWI S
Sbjct: 228 VVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGS 287
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
++ + N L +LI MY KCG
Sbjct: 288 WVRDNGFG-SNLQLTNALIDMYCKCG 312
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNV-EPDDVTFVNILPACAHLGALDLGKWIH 177
L SWN M+ G+ + AL +F +M + + PDD+TFV +L AC G +DLG H
Sbjct: 431 LASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLG---H 487
Query: 178 SYIDKQFYDF 207
Y D+
Sbjct: 488 QYFRSMIQDY 497
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 119 bits (298), Expect = 4e-25
Identities = 54/87 (62%), Positives = 71/87 (81%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWNVMIGGYT M YKEAL +FR+M VEP ++TF++ILP+CAHLGA+DLGKWIH+
Sbjct: 327 VISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHA 386
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCGS 261
YI+K F + + +L TSLI +YAKCG+
Sbjct: 387 YINKNF-NSVSTSLSTSLIDLYAKCGN 412
Score = 80.5 bits (197), Expect = 2e-13
Identities = 41/86 (47%), Positives = 56/86 (65%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY QM + KEAL +F M++ NV P++ T V++L ACA ALDLG + S
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
+I+ + N L +LI MY+KCG
Sbjct: 286 WIEDRGL-CSNLKLVNALIDMYSKCG 310
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L SWN MI G + +A +F +M +EP+++TFV IL AC H G +DLG+ S
Sbjct: 428 LASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFS 487
>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 119 bits (297), Expect = 6e-25
Identities = 55/87 (63%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN +IGGYT M+ YKEAL +F++M + P+DVT V+ILPACAHLGA+D+G+WIH
Sbjct: 264 VVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHV 323
Query: 181 YIDKQFYDFQN-PALWTSLIHMYAKCG 258
YIDK+ D N P+L TSLI MYAKCG
Sbjct: 324 YIDKKLKDVTNAPSLRTSLIDMYAKCG 350
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/86 (44%), Positives = 57/86 (66%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY + YKEAL +F++M + NV PD+ T V +L ACA +++LG+ +HS
Sbjct: 163 VVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHS 222
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
+ID + N + +LI +Y+KCG
Sbjct: 223 WIDDHGFG-SNLKIVNALIDLYSKCG 247
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L SWN MI G+ + +F +M++ +EPDD+TFV +L AC+H G LDLG+ I
Sbjct: 367 LSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFK 426
Query: 181 YIDKQF 198
+ + +
Sbjct: 427 SMTQDY 432
>ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cicer arietinum]
Length = 737
Score = 118 bits (295), Expect = 9e-25
Identities = 52/86 (60%), Positives = 67/86 (77%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWN MI GY+ +S Y+EAL +F M + NV+P+D+TF+ ILPACA LGALDLGKW+++
Sbjct: 329 VISWNTMISGYSYLSLYEEALALFDVMLRSNVKPNDITFLGILPACACLGALDLGKWVYA 388
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
YIDK N +LWTSLI MYAKCG
Sbjct: 389 YIDKNLKSSSNASLWTSLIDMYAKCG 414
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/86 (41%), Positives = 53/86 (61%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
LVSWN MI GY Q +++EA+ F +MQ+ N+ P T V +L AC H G+ +LG WI S
Sbjct: 228 LVSWNAMIAGYVQSCRFEEAIECFCEMQKTNISPSKSTMVTLLSACGHTGSRELGNWIGS 287
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
++ + N + +L+ MY+KCG
Sbjct: 288 WVRDNGFG-SNLQMTNALVDMYSKCG 312
Score = 55.1 bits (131), Expect = 1e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGK 168
L +WN M+ G ++AL +F +M + +PDD+TFV IL AC G +DLG+
Sbjct: 431 LSAWNAMLSGLAMHGHAEKALALFSEMVDKGFQPDDITFVGILSACTQAGLVDLGQ 486
>gb|ESW26970.1| hypothetical protein PHAVU_003G162300g [Phaseolus vulgaris]
Length = 733
Score = 117 bits (294), Expect = 1e-24
Identities = 52/86 (60%), Positives = 65/86 (75%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L+SWN MIGGY+ +S Y EAL +F M + V P+DVTF+ +LPACA LGALDLGKW+H+
Sbjct: 325 LISWNTMIGGYSYLSLYAEALALFDLMLREKVTPNDVTFLGVLPACACLGALDLGKWVHA 384
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
Y+DK N +LWTS+I MYAKCG
Sbjct: 385 YVDKILKGTDNASLWTSIIDMYAKCG 410
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/86 (46%), Positives = 55/86 (63%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY Q +++EAL F MQ+ +V P+ T V++L AC HLG+L+LGKWI S
Sbjct: 224 VVSWNAMIAGYVQGGRFEEALACFSSMQEADVSPNKSTMVSVLSACGHLGSLELGKWIGS 283
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
++ N L +L+ MY KCG
Sbjct: 284 WVRDHGLG-SNIQLVNALVDMYCKCG 308
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/69 (39%), Positives = 36/69 (52%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L S N MI G+ + AL +F +M + +PDD+TFV +L AC G +DLG H
Sbjct: 427 LASRNAMISGFAMNGHAERALALFEEMIKEGFQPDDITFVGVLSACTQAGLVDLG---HR 483
Query: 181 YIDKQFYDF 207
Y DF
Sbjct: 484 YFSSMNQDF 492
>ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 737
Score = 114 bits (284), Expect = 2e-23
Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++ WN MIGGY +S Y+EAL +F M + NV P+DVTF+ +LPACA LGALDLGKW+H+
Sbjct: 326 VILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHA 385
Query: 181 YIDKQFY---DFQNPALWTSLIHMYAKCG 258
YIDK + N +LWTS+I MYAKCG
Sbjct: 386 YIDKNLKGTGNVNNVSLWTSIIVMYAKCG 414
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/86 (45%), Positives = 59/86 (68%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY Q +++EAL F +MQ+ +V P+ T V++L AC HL +L+LGKWI S
Sbjct: 225 VVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGS 284
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
++ + + +N L +L+ MY+KCG
Sbjct: 285 WVRDRGFG-KNLQLVNALVDMYSKCG 309
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L SWN MI G + AL +F +M +PDD+TFV +L AC G ++LG S
Sbjct: 431 LASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFS 490
Query: 181 YIDKQF 198
++K +
Sbjct: 491 SMNKDY 496
>gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 113 bits (283), Expect = 2e-23
Identities = 51/87 (58%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWN +IGGYT M+ YKEAL +F++M + P++VT ++ILPACAHLGA+D+G+WIH
Sbjct: 301 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHV 360
Query: 181 YIDKQFYDFQNP-ALWTSLIHMYAKCG 258
YIDK+ NP +L TSLI MYAKCG
Sbjct: 361 YIDKRLKGVSNPSSLRTSLIDMYAKCG 387
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/86 (43%), Positives = 57/86 (66%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN +I GY + YKEAL +F++M + NV+PD+ T V +L ACA +++LG+ +HS
Sbjct: 200 VVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHS 259
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
+ID + N + +LI +Y KCG
Sbjct: 260 WIDDHGFG-SNLKIVNALIDLYIKCG 284
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWI 174
L SWN MI G+ + A IF +M++ +EPDD+TFV +L AC+H G LDLG+ I
Sbjct: 404 LSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461
>gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 112 bits (281), Expect = 4e-23
Identities = 52/87 (59%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN +IGGYT M+ YKEAL +F++M + P+DVT +++LPACAHLGA+D+G+WIH
Sbjct: 282 VVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHV 341
Query: 181 YIDKQFYDFQN-PALWTSLIHMYAKCG 258
YIDK+ N AL TSLI MYAKCG
Sbjct: 342 YIDKRLKGVTNGSALRTSLIDMYAKCG 368
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/86 (40%), Positives = 56/86 (65%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY + Y+EAL +F++M + NV PD+ T V++L ACA G+++LG+ IH+
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
+D + + + I +Y+KCG
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCG 265
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
L SWN MI G+ + A +F +M++ +EPDD+T V +L AC+H G LDLG+ I
Sbjct: 385 LSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFK 444
Query: 181 YIDKQF 198
+ + +
Sbjct: 445 SVTQDY 450
>ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutrema salsugineum]
gi|557095503|gb|ESQ36085.1| hypothetical protein
EUTSA_v10006910mg [Eutrema salsugineum]
Length = 740
Score = 112 bits (280), Expect = 5e-23
Identities = 53/87 (60%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN +IGGYT MS YKEAL +F++M + N P+DVT ++ILPACAHLGA+D+G+WIH
Sbjct: 331 VVSWNTLIGGYTHMSLYKEALLLFQEMLRSNESPNDVTMLSILPACAHLGAIDIGRWIHV 390
Query: 181 YIDKQFYDFQN-PALWTSLIHMYAKCG 258
YI K+ N +L TSLI MYAKCG
Sbjct: 391 YIAKKLKGVTNASSLRTSLIDMYAKCG 417
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN MI GY + YKEA +F M + NV PD+ T V +L ACA G+++LG+ +HS
Sbjct: 230 VVSWNAMISGYVETGYYKEAFELFEDMMKSNVSPDESTMVTVLSACAQSGSIELGRQVHS 289
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
+ID + N + +LI +Y+KCG
Sbjct: 290 WIDDHGFG-SNLKIVNALIDLYSKCG 314
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWI 174
L SWN MI G+ + A +F +M++ +EPD +TFV +L AC+H G LDLG+ I
Sbjct: 434 LSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDGITFVGLLSACSHSGMLDLGRRI 491
>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
gi|482575565|gb|EOA39752.1| hypothetical protein
CARUB_v10008399mg [Capsella rubella]
Length = 740
Score = 112 bits (279), Expect = 7e-23
Identities = 51/87 (58%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
++SWN +IGGYT M+ YKEAL +F++M + P++VT ++ILPACAHLGA+D+G+WIH
Sbjct: 331 VISWNTLIGGYTHMNLYKEALLLFQEMLRLGEIPNEVTMLSILPACAHLGAIDIGRWIHV 390
Query: 181 YIDKQFYDFQNP-ALWTSLIHMYAKCG 258
YIDK+ NP +L TSLI MYAKCG
Sbjct: 391 YIDKRLKGVSNPSSLRTSLIDMYAKCG 417
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWIHS 180
+VSWN +I GY + YKEAL +F++M Q NV+PD+ T V +L AC +++LG+ +HS
Sbjct: 230 VVSWNALISGYAETGNYKEALELFKEMMQTNVKPDESTMVTVLSACGQSASIELGRQVHS 289
Query: 181 YIDKQFYDFQNPALWTSLIHMYAKCG 258
+ID + N + +LI +Y KCG
Sbjct: 290 WIDDHGFG-SNLKIVNALIDLYIKCG 314
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +1
Query: 1 LVSWNVMIGGYTQMSKYKEALTIFRQMQQRNVEPDDVTFVNILPACAHLGALDLGKWI 174
L SWN MI G+ + A IF +M + +EPDD+TFV +L AC+H G LDLG+ I
Sbjct: 434 LSSWNAMIFGFAMHGRANAAFDIFSRMGKNGIEPDDITFVGLLSACSHSGMLDLGRHI 491