BLASTX nr result

ID: Rauwolfia21_contig00034472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00034472
         (385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522368.1| DNA binding protein, putative [Ricinus commu...    58   1e-06
emb|CAN76392.1| hypothetical protein VITISV_011465 [Vitis vinifera]    57   2e-06
ref|XP_006425800.1| hypothetical protein CICLE_v10026137mg [Citr...    55   7e-06

>ref|XP_002522368.1| DNA binding protein, putative [Ricinus communis]
           gi|223538446|gb|EEF40052.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 280

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
 Frame = +2

Query: 11  KYTVTIPREVTSLLKLRKKTEMVLRDEGGTEWPVKLYKCADSRVMFGSGWMQFRNGNDLR 190
           +YTV + R V     L+ +  M LR E G  WPVK+    D R++  +GW  F   + + 
Sbjct: 182 RYTVYVHRLVVKTHNLKLQENMKLRGESGKFWPVKVCFRTDGRIIINNGWAAFHRKHKVA 241

Query: 191 DSDSCKFTFL--EGGSSKVIQVKVLR---GHGRRE 280
             D+C F F+  E    K IQV++LR    H ++E
Sbjct: 242 IGDTCVFEFIPAENNMVKEIQVQILRKPVNHTKKE 276


>emb|CAN76392.1| hypothetical protein VITISV_011465 [Vitis vinifera]
          Length = 765

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
 Frame = +2

Query: 11  KYTVTIPREVTSLLKLRKKTEMVLRDEGGTEWPVKLYKCADSRVMFGSGWMQFRNGNDLR 190
           +Y + IP+ V     ++ + EMV+RD+    WP++L    D R+    GW +F   N+L 
Sbjct: 669 RYNLYIPQHVLKXNNIKLEGEMVMRDQKDRSWPMRLTTRKDGRLALVKGWAKFWKENNLG 728

Query: 191 DSDSCKFTFL--EGGSSKVIQVKVLR 262
             D C F F+   G  SK I V+V+R
Sbjct: 729 RRDQCVFEFILGRGRISKEIHVQVIR 754


>ref|XP_006425800.1| hypothetical protein CICLE_v10026137mg [Citrus clementina]
           gi|568824576|ref|XP_006466673.1| PREDICTED: putative B3
           domain-containing protein At5g66980-like [Citrus
           sinensis] gi|557527790|gb|ESR39040.1| hypothetical
           protein CICLE_v10026137mg [Citrus clementina]
          Length = 309

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
 Frame = +2

Query: 11  KYTVTIPREVTSLLKLRKKTEMVLRDEGGTEWPVKLYKCADSRVMFGSGWMQFRNGNDLR 190
           +Y V +   V     ++ + EM+LRD+ G +WPVK+    + R++   GW  F     L 
Sbjct: 218 RYAVNVSVRVVRSHGIKLEPEMMLRDQNGRKWPVKISFRTNGRIVITGGWSDFWREQKLE 277

Query: 191 DSDSCKFTFL--EGGSSKVIQVKVLR 262
             D C F F+   G  SK ++V+V+R
Sbjct: 278 AGDKCVFEFVLTRGNMSKEMKVQVVR 303


Top