BLASTX nr result

ID: Rauwolfia21_contig00034394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00034394
         (862 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ELK12877.1| WD repeat-containing protein 87 [Pteropus alecto]       58   4e-06
ref|XP_629945.1| hypothetical protein DDB_G0291788 [Dictyosteliu...    57   7e-06
ref|XP_001320877.1| hypothetical protein [Trichomonas vaginalis ...    57   9e-06

>gb|ELK12877.1| WD repeat-containing protein 87 [Pteropus alecto]
          Length = 3300

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
 Frame = +2

Query: 2    KKEEHLEASPKHSESTHSSPRKPISPPKDEENRKLLNEKEGEGHMESGKEVNEXXXXXXX 181
            K+EE  E+  K  E   S  ++  S  K+EE  + L+++E E  + S +EV E       
Sbjct: 2393 KEEEEEESLSKEEEEMESLSKEEESLSKEEEEEESLSKEEEEESL-SKEEVKENLSKEEE 2451

Query: 182  XXXXXXXKQVENRKSLDGKEKYVELSPLKSESTDSSPRKSSVSPFKQEKGRNSFDEKEDV 361
                      E  ++L G+E+   LS  + ES   S  K         K   S  ++E+ 
Sbjct: 2452 EEVLS-----EEEENLSGEEEEESLSKEEEESLKKSLSKEEEEMESLSKEEESLSKEEEE 2506

Query: 362  NESLTSEDEHQESPTERKMV------VETPAKAEQPEPTLGKEENPEPANKGDDHV*SPG 523
             ESL+ E+E +    E + +       E+ +K E+ E +L KEE  E  +K ++ + S  
Sbjct: 2507 EESLSKEEEEESLSKEEEEMESLSKEEESLSKEEEEEESLSKEEEEESLSKEEEEMESLS 2566

Query: 524  QEQSRATR 547
            +E+   ++
Sbjct: 2567 KEEESLSK 2574


>ref|XP_629945.1| hypothetical protein DDB_G0291788 [Dictyostelium discoideum AX4]
           gi|60463324|gb|EAL61515.1| hypothetical protein
           DDB_G0291788 [Dictyostelium discoideum AX4]
          Length = 2536

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 17/196 (8%)
 Frame = +2

Query: 2   KKEEHLEASPKHSESTHSSPRKPISPPKDE----------ENRKLLNEKEGEGHMESGKE 151
           +KE + + S   SE + S    P+   K +            +KL  EKE E   E  K+
Sbjct: 131 EKEGNAQESGSESEESESESEVPVKKTKKQLVEEQKKSAAAAKKLQKEKEKEKEKEKAKK 190

Query: 152 VNEXXXXXXXXXXXXXXKQVENRKSLDGKEKYVELSPLKSESTDSSPRKSSVSPFKQEKG 331
           + E              K+ E  K+   KEK  E     SES    P+KS+ S  +++  
Sbjct: 191 LKEKEKEKEKAKKQ---KEKEKEKAKKLKEKEKEKKKKNSES--EKPKKSNKSKKQEDTE 245

Query: 332 RNSFDEKEDVNESLTSEDEHQESPTERKMVVET-------PAKAEQPEPTLGKEENPEPA 490
             S  E E  +ES +SE E +ES  +     +T       P K  + + T  +EE+    
Sbjct: 246 NESESESESESESSSSESEKEESSKKSSSKKKTTTKEKSKPTKKSKKQETEDEEESGSDE 305

Query: 491 NKGDDHV*SPGQEQSR 538
           + GDD   S   E  R
Sbjct: 306 SSGDDDEKSSSDEDER 321


>ref|XP_001320877.1| hypothetical protein [Trichomonas vaginalis G3]
           gi|121903691|gb|EAY08654.1| hypothetical protein
           TVAG_240150 [Trichomonas vaginalis G3]
          Length = 603

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 41/189 (21%), Positives = 76/189 (40%)
 Frame = +2

Query: 2   KKEEHLEASPKHSESTHSSPRKPISPPKDEENRKLLNEKEGEGHMESGKEVNEXXXXXXX 181
           K+E+  E  P+ +E+  +    P+  PK EEN K  NE E     +  +E          
Sbjct: 158 KEEQKEEPQPQEAETQENKQENPVEEPKSEENTKPENENEEPKEEQPSEEAAAATEPTPE 217

Query: 182 XXXXXXXKQVENRKSLDGKEKYVELSPLKSESTDSSPRKSSVSPFKQEKGRNSFDEKEDV 361
                      N +    +++  E +P + ++T+ SP++       Q++ ++    +E++
Sbjct: 218 EKPAEEQTPENNSEENQEQQQQNEETPKEEQTTEKSPKEE-----PQDEAKSEIQNQEEI 272

Query: 362 NESLTSEDEHQESPTERKMVVETPAKAEQPEPTLGKEENPEPANKGDDHV*SPGQEQSRA 541
                +E E  + P           K ++ + TL +EE  E      D   SP +EQ + 
Sbjct: 273 KNEEPAETEESKEP-----------KEDKTQETLQEEEKTE----NQDQNSSPNEEQPQT 317

Query: 542 TRPTTFPSE 568
              T  P E
Sbjct: 318 EEETAQPQE 326


Top