BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00034162
         (248 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004297853.1| PREDICTED: enzymatic polyprotein-like [Fraga...   114   1e-23
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v...   111   1e-22
gb|ABX80510.1| RdRp [Strawberry vein banding virus]                   111   1e-22
ref|XP_004289412.1| PREDICTED: enzymatic polyprotein-like [Fraga...   110   1e-22
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]         110   1e-22
ref|XP_004309790.1| PREDICTED: enzymatic polyprotein-like [Fraga...   105   6e-21
ref|XP_002304262.1| predicted protein [Populus trichocarpa]           103   3e-20
ref|XP_002336340.1| predicted protein [Populus trichocarpa]           103   3e-20
gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subc...   102   5e-20
gb|AAP53052.1| retrotransposon protein, putative, Ty3-gypsy subc...   102   5e-20
emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group] gi...   102   5e-20
tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacillifo...   102   5e-20
tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacillifo...   102   5e-20
gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]     102   5e-20
ref|XP_004293016.1| PREDICTED: enzymatic polyprotein-like [Fraga...   101   9e-20
gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subc...   101   9e-20
gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subc...   101   9e-20
ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia fl...   101   9e-20
gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-c...   101   9e-20
gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subc...   101   9e-20

>ref|XP_004297853.1| PREDICTED: enzymatic polyprotein-like [Fragaria vesca subsp. vesca]
          Length = 268

 Score =  114 bits (286), Expect = 1e-23
 Identities = 53/79 (67%), Positives = 58/79 (73%)
 Frame = -1

Query: 242 DGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMPFG 63
           DGY +     LIN  +   +FSKFD KSGFWQVKMHPDSI    F TPQG YEWLVMP G
Sbjct: 102 DGYQIAQVRVLINRLKGAKIFSKFDAKSGFWQVKMHPDSIALRAFGTPQGHYEWLVMPCG 161

Query: 62  LKKAPQIFQRKMDDIFSPY 6
           LK+AP IFQRKMD+IF PY
Sbjct: 162 LKQAPSIFQRKMDNIFRPY 180


>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
           gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein
           banding virus]
          Length = 708

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = -1

Query: 242 DGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMPFG 63
           DGY LP+KE L+     KT +S FDCKSGFWQV++ P++I+ T FS PQG YEWLVMPFG
Sbjct: 348 DGYLLPNKEQLLQRIGGKTFYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFG 407

Query: 62  LKKAPQIFQRKMDDIFS 12
           LK+AP IFQR MD+  S
Sbjct: 408 LKQAPAIFQRHMDESLS 424


>gb|ABX80510.1| RdRp [Strawberry vein banding virus]
          Length = 94

 Score =  111 bits (277), Expect = 1e-22
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = -1

Query: 242 DGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMPFG 63
           DGY LP+KE L+     KT +S FDCKSGFWQV++ P++I+ T FS PQG YEWLVMPFG
Sbjct: 9   DGYLLPNKEQLLQRIGGKTFYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFG 68

Query: 62  LKKAPQIFQRKMDDIFS 12
           LK+AP IFQR MD+  S
Sbjct: 69  LKQAPAIFQRHMDESLS 85


>ref|XP_004289412.1| PREDICTED: enzymatic polyprotein-like [Fragaria vesca subsp. vesca]
          Length = 390

 Score =  110 bits (276), Expect = 1e-22
 Identities = 52/76 (68%), Positives = 57/76 (75%)
 Frame = -1

Query: 242 DGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMPFG 63
           DGY +     LIN  +   +FSKFD KSGFWQVKMHPDSI  T F TPQG YEWLVM FG
Sbjct: 15  DGYQIIQTRVLINRLKRAKVFSKFDAKSGFWQVKMHPDSIPLTAFGTPQGHYEWLVMSFG 74

Query: 62  LKKAPQIFQRKMDDIF 15
           LK+AP IFQRKMD+IF
Sbjct: 75  LKQAPSIFQRKMDNIF 90


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score =  110 bits (276), Expect = 1e-22
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = -1

Query: 242 DGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMPFG 63
           DGY LP+KE L+     KT +S FDCKSGFWQV++ P++I+ T FS PQG YEWLVMPFG
Sbjct: 339 DGYLLPNKEQLLQRIGGKTYYSSFDCKSGFWQVRLAPETIQLTAFSCPQGHYEWLVMPFG 398

Query: 62  LKKAPQIFQRKMDDIFS 12
           LK+AP IFQR MD+  S
Sbjct: 399 LKQAPAIFQRHMDESLS 415


>ref|XP_004309790.1| PREDICTED: enzymatic polyprotein-like [Fragaria vesca subsp. vesca]
          Length = 404

 Score =  105 bits (262), Expect = 6e-21
 Identities = 48/79 (60%), Positives = 56/79 (70%)
 Frame = -1

Query: 242 DGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMPFG 63
           D Y +     LIN  +    FSKFD KSGFWQVK+ P+SI  T F TPQG Y+WLVMPFG
Sbjct: 15  DSYQIAQVRVLINRLKGAKFFSKFDAKSGFWQVKIQPESIALTAFGTPQGHYKWLVMPFG 74

Query: 62  LKKAPQIFQRKMDDIFSPY 6
           LK+A  IFQ+KMD+IF PY
Sbjct: 75  LKQASSIFQKKMDNIFKPY 93


>ref|XP_002304262.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  103 bits (256), Expect = 3e-20
 Identities = 46/82 (56%), Positives = 57/82 (69%)
 Frame = -1

Query: 248 IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
           I DGY LP K+ L++  R K +FS FDCKSGFWQV +   S K T F+ PQG ++W VMP
Sbjct: 90  IGDGYLLPRKDELLDQIRGKKIFSSFDCKSGFWQVLLDNSSQKLTAFTCPQGHFQWKVMP 149

Query: 68  FGLKKAPQIFQRKMDDIFSPYD 3
           FGLK+AP IFQR MD  F  ++
Sbjct: 150 FGLKQAPSIFQRHMDQTFKGFE 171


>ref|XP_002336340.1| predicted protein [Populus trichocarpa]
          Length = 556

 Score =  103 bits (256), Expect = 3e-20
 Identities = 46/82 (56%), Positives = 57/82 (69%)
 Frame = -1

Query: 248 IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
           I DGY LP K+ L++  R K +FS FDCKSGFWQV +   S K T F+ PQG ++W VMP
Sbjct: 259 IGDGYLLPRKDELLDQIRGKKIFSSFDCKSGFWQVLLDNSSQKLTAFTCPQGHFQWKVMP 318

Query: 68  FGLKKAPQIFQRKMDDIFSPYD 3
           FGLK+AP IFQR MD  F  ++
Sbjct: 319 FGLKQAPSIFQRHMDQTFKGFE 340


>gb|ABA99914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 730

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = -1

Query: 248 IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
           I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 186 IEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 245

Query: 68  FGLKKAPQIFQRKMDDIFS 12
            GLK AP IFQRKM +IF+
Sbjct: 246 LGLKNAPAIFQRKMQNIFN 264


>gb|AAP53052.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1183

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = -1

Query: 248  IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
            I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 773  IEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 832

Query: 68   FGLKKAPQIFQRKMDDIFS 12
             GLK AP IFQRKM +IF+
Sbjct: 833  LGLKNAPAIFQRKMQNIFN 851


>emb|CAE02744.2| OSJNBa0006B20.7 [Oryza sativa Japonica Group]
           gi|116310779|emb|CAH67571.1| H0315A08.1 [Oryza sativa
           Indica Group]
          Length = 685

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = -1

Query: 248 IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
           I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 248 IEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 307

Query: 68  FGLKKAPQIFQRKMDDIFS 12
            GLK AP IFQRKM +IF+
Sbjct: 308 LGLKNAPAIFQRKMQNIFN 326


>tpd|FAA00012.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = -1

Query: 248  IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
            I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 1353 IEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 1412

Query: 68   FGLKKAPQIFQRKMDDIFS 12
             GLK AP IFQRKM +IF+
Sbjct: 1413 LGLKNAPAIFQRKMQNIFN 1431


>tpd|FAA00009.1| TPA: hypothetical protein [Rice tungro bacilliform virus]
          Length = 1718

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = -1

Query: 248  IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
            I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 1353 IEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 1412

Query: 68   FGLKKAPQIFQRKMDDIFS 12
             GLK AP IFQRKM +IF+
Sbjct: 1413 LGLKNAPAIFQRKMQNIFN 1431


>gb|AAU10730.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1326

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = -1

Query: 248  IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
            I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 928  IEDAYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 987

Query: 68   FGLKKAPQIFQRKMDDIFS 12
             GLK AP IFQRKM +IF+
Sbjct: 988  LGLKNAPAIFQRKMQNIFN 1006


>ref|XP_004293016.1| PREDICTED: enzymatic polyprotein-like [Fragaria vesca subsp. vesca]
          Length = 145

 Score =  101 bits (252), Expect = 9e-20
 Identities = 47/68 (69%), Positives = 50/68 (73%)
 Frame = -1

Query: 242 DGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMPFG 63
           DGY +     LIN  R   +FSKFD KSGFWQVKMHPDSI  T F TPQG YEWLVMPFG
Sbjct: 78  DGYQIAQVRVLINRLRGAKIFSKFDAKSGFWQVKMHPDSIVLTAFGTPQGHYEWLVMPFG 137

Query: 62  LKKAPQIF 39
           LK+AP IF
Sbjct: 138 LKQAPSIF 145


>gb|ABA99372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1098

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = -1

Query: 248 IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
           I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 582 IEDAYNIPNKQEWINRIQGSKYFSKFDLKTGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 641

Query: 68  FGLKKAPQIFQRKMDDIFS 12
            GLK AP +FQRKM +IF+
Sbjct: 642 LGLKNAPALFQRKMQNIFN 660


>gb|ABA96037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 792

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = -1

Query: 248 IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
           I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 248 IEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 307

Query: 68  FGLKKAPQIFQRKMDDIFS 12
            GLK AP +FQRKM +IF+
Sbjct: 308 LGLKNAPALFQRKMQNIFN 326


>ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
           gi|219815610|gb|ACL36982.1| putative enzymatic
           polyprotein [Rudbeckia flower distortion virus]
          Length = 701

 Score =  101 bits (252), Expect = 9e-20
 Identities = 44/81 (54%), Positives = 58/81 (71%)
 Frame = -1

Query: 248 IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
           I DGY LP+KE+++   R +  FS  DCKSGFWQ++++ +S   T FS P GQYEW V+P
Sbjct: 339 ISDGYLLPNKETILTAIRGRKYFSTLDCKSGFWQIRLNENSKPLTAFSCPMGQYEWNVVP 398

Query: 68  FGLKKAPQIFQRKMDDIFSPY 6
           FGLK+AP +FQR MD+ F  Y
Sbjct: 399 FGLKQAPGLFQRFMDNSFKEY 419


>gb|AAP53741.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 2828

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = -1

Query: 248  IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
            I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 2312 IEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 2371

Query: 68   FGLKKAPQIFQRKMDDIFS 12
             GLK AP +FQRKM +IF+
Sbjct: 2372 LGLKNAPALFQRKMQNIFN 2390


>gb|ABG66247.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 764

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = -1

Query: 248 IFDGYFLPHKESLINCTRSKTLFSKFDCKSGFWQVKMHPDSIKYTTFSTPQGQYEWLVMP 69
           I D Y +P+K+  IN  +    FSKFD K+GFWQVKM  +SI++T F+ PQG YEWLVMP
Sbjct: 248 IEDAYNIPNKQEWINRIQGSKYFSKFDLKAGFWQVKMAEESIEWTAFTCPQGHYEWLVMP 307

Query: 68  FGLKKAPQIFQRKMDDIFS 12
            GLK AP +FQRKM +IF+
Sbjct: 308 LGLKNAPALFQRKMQNIFN 326