BLASTX nr result

ID: Rauwolfia21_contig00033176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00033176
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI18282.1| hypothetical protein [uncultured Chromatiales bac...    86   4e-15
ref|WP_009288699.1| hypothetical protein [Halomonas titanicae] g...    76   5e-12
ref|WP_002007003.1| hypothetical protein [Vibrio cholerae] gi|39...    55   7e-06

>gb|ADI18282.1| hypothetical protein [uncultured Chromatiales bacterium
           HF0200_41F04]
          Length = 89

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 45/69 (65%), Positives = 48/69 (69%)
 Frame = -3

Query: 235 VSVWGTVPGYLKLRSFSWKHGINHFVI*KITRHQLSALESRIYLRFQPTTLNLDNQRQAG 56
           VSVWGTV  YLKLR FSWK GINHF   K  RH++S L SRI+LR  PT LN DN   A 
Sbjct: 21  VSVWGTVTFYLKLRGFSWKQGINHFGPKKGPRHRISGLLSRIFLRELPTCLNRDNHHPAD 80

Query: 55  LAFSVPPSQ 29
           L FSV PSQ
Sbjct: 81  LTFSVTPSQ 89


>ref|WP_009288699.1| hypothetical protein [Halomonas titanicae]
           gi|445563934|gb|ELY20073.1| hypothetical protein
           HALTITAN_3298 [Halomonas titanicae BH1]
          Length = 75

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 42/76 (55%), Positives = 52/76 (68%)
 Frame = -3

Query: 235 VSVWGTVPGYLKLRSFSWKHGINHFVI*KITRHQLSALESRIYLRFQPTTLNLDNQRQAG 56
           +SVWGTV   LKLR FSWK GI+ F+   ++  ++SAL  RIYLR +PT  + D QR A 
Sbjct: 1   MSVWGTVAHDLKLRGFSWKRGISDFLT-VVSSSRVSALRPRIYLRSRPTHFHQDYQRLAH 59

Query: 55  LAFSVPPSQ*PEVQEY 8
           LAF VPPSQ   V+EY
Sbjct: 60  LAFFVPPSQPCPVREY 75


>ref|WP_002007003.1| hypothetical protein [Vibrio cholerae] gi|395939205|gb|EJH49888.1|
           hypothetical protein VCHC46A1_3584 [Vibrio cholerae
           HC-46A1] gi|395948786|gb|EJH59424.1| hypothetical
           protein VCHC46A1_0261 [Vibrio cholerae HC-46A1]
           gi|395948890|gb|EJH59525.1| hypothetical protein
           VCHC46A1_0001 [Vibrio cholerae HC-46A1]
          Length = 43

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -3

Query: 235 VSVWGTVPGYLKLRSFSWKHGINHFVI*KITRHQLSALE 119
           +SVWGT+P YLKLR FSWKHGIN F    + R ++SALE
Sbjct: 1   MSVWGTIPDYLKLRGFSWKHGINDFTT-VVARRRVSALE 38


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