BLASTX nr result
ID: Rauwolfia21_contig00030993
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00030993
(226 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera] 80 2e-13
ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
gb|EOX93462.1| Pentatricopeptide repeat-containing protein, puta... 75 9e-12
gb|EOX93461.1| Pentatricopeptide repeat-containing protein, puta... 75 9e-12
gb|EMJ16173.1| hypothetical protein PRUPE_ppa001796mg [Prunus pe... 75 9e-12
ref|XP_002531694.1| pentatricopeptide repeat-containing protein,... 75 1e-11
ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_004243553.1| PREDICTED: pentatricopeptide repeat-containi... 73 5e-11
ref|XP_006856878.1| hypothetical protein AMTR_s00055p00197790 [A... 69 5e-10
ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citr... 69 9e-10
ref|XP_004295353.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
gb|EPS74565.1| hypothetical protein M569_00187, partial [Genlise... 62 6e-08
>ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = +1
Query: 7 WNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLGVPFVAN 186
WNSDE+VWT+LLDGLLKEGE +LC+K L +ES+N TL+ QTY+ L+RELS L
Sbjct: 760 WNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIP 819
Query: 187 KVPHTLGMHQD 219
++ LG+ +D
Sbjct: 820 QISQQLGIVKD 830
>ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/71 (53%), Positives = 51/71 (71%)
Frame = +1
Query: 7 WNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLGVPFVAN 186
WNSDE+ WT+LLDGLLKEGE +LC+K L +ES+N TL+ QTY+ L+RELS L
Sbjct: 760 WNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIP 819
Query: 187 KVPHTLGMHQD 219
++ LG+ +D
Sbjct: 820 QISQQLGIVKD 830
>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/56 (62%), Positives = 47/56 (83%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLG 168
+ WN+DEIVWT+L+DGLLKEGE +LC+K L +ESKN+T + QTY+ L RELS++G
Sbjct: 748 KEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 803
>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/56 (62%), Positives = 47/56 (83%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLG 168
+ WN+DEIVWT+L+DGLLKEGE +LC+K L +ESKN+T + QTY+ L RELS++G
Sbjct: 888 KEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 943
>ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = +1
Query: 7 WNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLGVPFVAN 186
WNSDE+VWT+LLDGLLKEGE +L ++ L +ES+N TL+ QT + L+RELS LG
Sbjct: 754 WNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIP 813
Query: 187 KVPHTLGMHQDEQ 225
++ LG+ +++Q
Sbjct: 814 QISKQLGIVKEKQ 826
>gb|EOX93462.1| Pentatricopeptide repeat-containing protein, putative isoform 2
[Theobroma cacao] gi|508701567|gb|EOX93463.1|
Pentatricopeptide repeat-containing protein, putative
isoform 2 [Theobroma cacao]
Length = 716
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/57 (57%), Positives = 46/57 (80%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLGV 171
+ W+SDEIVWT+L+DGLLKEGE++LC+K L +ES+N + QTY+ L+RE SK G+
Sbjct: 643 KQWSSDEIVWTVLIDGLLKEGESDLCMKLLHVMESRNCPPNFQTYVILAREFSKYGL 699
>gb|EOX93461.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao]
Length = 909
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/57 (57%), Positives = 46/57 (80%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLGV 171
+ W+SDEIVWT+L+DGLLKEGE++LC+K L +ES+N + QTY+ L+RE SK G+
Sbjct: 836 KQWSSDEIVWTVLIDGLLKEGESDLCMKLLHVMESRNCPPNFQTYVILAREFSKYGL 892
>gb|EMJ16173.1| hypothetical protein PRUPE_ppa001796mg [Prunus persica]
Length = 763
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKL----G 168
+ WN+DEIVWT+L+DGLLKEG+++LC+K L IES+ ++ QTY L+RELSK+ G
Sbjct: 689 KQWNTDEIVWTVLIDGLLKEGQSDLCMKLLHVIESQKCSISFQTYDILARELSKVNKGRG 748
Query: 169 VPFVANKVPHTLGMH 213
+ N+ G+H
Sbjct: 749 SSQIVNRASDLKGVH 763
>ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528670|gb|EEF30685.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 821
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/68 (50%), Positives = 51/68 (75%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLGVPFV 180
+ WNSD IVWT+L+DGLL+EG+++LC+KFL +ES+N T TY+ L+RELSK+G
Sbjct: 747 KQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIG 806
Query: 181 ANKVPHTL 204
+++ + L
Sbjct: 807 TDQIGNRL 814
>ref|XP_006363010.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
isoform X1 [Solanum tuberosum]
gi|565394734|ref|XP_006363011.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X2 [Solanum tuberosum]
gi|565394736|ref|XP_006363012.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like isoform X3 [Solanum tuberosum]
Length = 913
Score = 74.3 bits (181), Expect = 2e-11
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKL 165
+ WN+DEIVWTIL+DGLLKE E+ LC+K L +ESK+ + QTY+ L+RELSKL
Sbjct: 857 KKWNNDEIVWTILIDGLLKERESELCMKLLHVMESKSCNISFQTYVILARELSKL 911
>ref|XP_004243553.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Solanum lycopersicum]
Length = 815
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKL 165
+ WN+DEIVWTIL+DGLLKE E+ LC+K L +ESK+ + QTY+ L+R+LSKL
Sbjct: 759 KKWNNDEIVWTILIDGLLKERESELCMKLLHVMESKSCNISFQTYVILARKLSKL 813
>ref|XP_006856878.1| hypothetical protein AMTR_s00055p00197790 [Amborella trichopoda]
gi|548860812|gb|ERN18345.1| hypothetical protein
AMTR_s00055p00197790 [Amborella trichopoda]
Length = 940
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +1
Query: 7 WNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLGVPFVAN 186
WN +E++WT+L+DGLLKEG + +C+KFL +E K T + QTY+ L+RE+SK +
Sbjct: 867 WNPNEVIWTVLIDGLLKEGNSEMCLKFLHEMEEKGCTPNFQTYVILAREMSK------ED 920
Query: 187 KVPHT 201
K+P T
Sbjct: 921 KLPET 925
>ref|XP_006447755.1| hypothetical protein CICLE_v10014182mg [Citrus clementina]
gi|568830449|ref|XP_006469511.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g65560-like [Citrus sinensis]
gi|557550366|gb|ESR60995.1| hypothetical protein
CICLE_v10014182mg [Citrus clementina]
Length = 929
Score = 68.6 bits (166), Expect = 9e-10
Identities = 29/55 (52%), Positives = 44/55 (80%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKL 165
+ WN+DEIVWT+L+DGL+ +G +LC+KFL +ES+N ++ QTY+ L+ ELSK+
Sbjct: 845 KQWNTDEIVWTVLVDGLVTKGLPDLCLKFLHIMESRNCCINLQTYVILANELSKV 899
>ref|XP_004295353.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
[Fragaria vesca subsp. vesca]
Length = 927
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +1
Query: 7 WNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSKLGVPFVAN 186
WN++EIVWT+L+DGLLKEG+++ C+ L IES+N L +TY L+RE S + V +
Sbjct: 856 WNANEIVWTVLIDGLLKEGQSDPCMHLLHVIESQNCILWVETYAILARERSHVNKSMVTS 915
Query: 187 KV 192
++
Sbjct: 916 QI 917
>gb|EPS74565.1| hypothetical protein M569_00187, partial [Genlisea aurea]
Length = 860
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +1
Query: 1 RPWNSDEIVWTILLDGLLKEGEANLCVKFLDAIESKNYTLHRQTYLTLSRELSK 162
+ WN DEIVW++L+D LLK GE+ C KFL A+ SKN + + Y L+RE+S+
Sbjct: 807 KQWNGDEIVWSVLIDVLLKNGESEACSKFLRAMNSKNIYVSKPAYRMLAREMSR 860