BLASTX nr result

ID: Rauwolfia21_contig00030888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00030888
         (458 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339771.1| PREDICTED: growth-regulating factor 9-like [...    77   2e-12
gb|EOX96174.1| Growth-regulating factor 9, putative [Theobroma c...    64   2e-08
gb|EOY24548.1| Growth-regulating factor 2 [Theobroma cacao]            60   4e-07

>ref|XP_006339771.1| PREDICTED: growth-regulating factor 9-like [Solanum tuberosum]
          Length = 420

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/107 (44%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
 Frame = -1

Query: 314 MQFHPLSIGPFVYSGKGGGAGDETEKKREGSPXXXXXXXXXXXGRQSCVIKQEEE----- 150
           MQ H  S  P   SGKG    ++  KK+EGSP              S V++++E+     
Sbjct: 1   MQLHLFSATPLSLSGKGK---EDEIKKKEGSPPCIELSLGYGS--SSHVVEEDEKDAKSS 55

Query: 149 NILFTAGQFQELYLQVVIFRYLSLGLPVPFHLILAIWKSFAGSVDCG 9
           N LFTA QFQEL LQ VIF+YL  GLPVPFHL   IW S + S+  G
Sbjct: 56  NSLFTAAQFQELQLQAVIFKYLVSGLPVPFHLFFIIWNSVSSSLGDG 102


>gb|EOX96174.1| Growth-regulating factor 9, putative [Theobroma cacao]
          Length = 528

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
 Frame = -1

Query: 314 MQFHPLSIGPFVYSGKGGGAG---------------DETEKKREGSPXXXXXXXXXXXGR 180
           M   P+   P   SG GGG                 +E EK++EGSP             
Sbjct: 4   MLAQPVQSPPLPDSGGGGGGSGTRERSEEKGGTVKMEEKEKRKEGSPSIRLGLGIDGNTT 63

Query: 179 QSCVIKQEEENILFTAGQFQELYLQVVIFRYLSLGLPVPFHLILAIWKSFAGS 21
           +  V+K  +   +FT  Q  EL LQ +I++Y++ G+PVP HL++ IWKS A S
Sbjct: 64  EKPVVKHGK--CVFTTAQLHELQLQALIYKYIAGGIPVPLHLVIPIWKSVASS 114


>gb|EOY24548.1| Growth-regulating factor 2 [Theobroma cacao]
          Length = 287

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -1

Query: 140 FTAGQFQELYLQVVIFRYLSLGLPVPFHLILAIWKSFAGSV 18
           FT  Q QEL LQ +I++Y+  GLPVP HL+L IWKSFAGSV
Sbjct: 101 FTVFQLQELQLQSLIYKYMEAGLPVPHHLLLPIWKSFAGSV 141


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