BLASTX nr result

ID: Rauwolfia21_contig00030852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00030852
         (493 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY30820.1| Uncharacterized protein TCM_037899 [Theobroma cacao]    57   3e-06
ref|XP_002324414.1| hypothetical protein POPTR_0018s05880g [Popu...    56   6e-06

>gb|EOY30820.1| Uncharacterized protein TCM_037899 [Theobroma cacao]
          Length = 84

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +1

Query: 325 CLCSPTKHLGSFRCRQHRAKYVWGGR 402
           CLCSPTKH GSFRCR H A+YVWGGR
Sbjct: 54  CLCSPTKHPGSFRCRHHHAEYVWGGR 79


>ref|XP_002324414.1| hypothetical protein POPTR_0018s05880g [Populus trichocarpa]
           gi|222865848|gb|EEF02979.1| hypothetical protein
           POPTR_0018s05880g [Populus trichocarpa]
          Length = 85

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/32 (75%), Positives = 26/32 (81%), Gaps = 3/32 (9%)
 Frame = +1

Query: 325 CLCSPTKHLGSFRCRQHRAKYVWGG---RRKQ 411
           CLCSPT+H GSFRCR HR+ YVWGG   RRKQ
Sbjct: 52  CLCSPTRHPGSFRCRHHRSDYVWGGRITRRKQ 83


Top