BLASTX nr result

ID: Rauwolfia21_contig00030826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00030826
         (715 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...    57   5e-06
ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...    57   6e-06
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...    57   6e-06

>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 278 QPINDLDFHPQNTVLISGAKDHTIKY 201
           QPINDLDFHPQNTVLISGAKDHTIK+
Sbjct: 183 QPINDLDFHPQNTVLISGAKDHTIKF 208


>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 278 QPINDLDFHPQNTVLISGAKDHTIKY 201
           QPINDLDFHPQNTVL+SGAKDHTIK+
Sbjct: 185 QPINDLDFHPQNTVLVSGAKDHTIKF 210


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 435

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 278 QPINDLDFHPQNTVLISGAKDHTIKY 201
           QPINDLDFHPQNTVL+SGAKDHTIK+
Sbjct: 183 QPINDLDFHPQNTVLVSGAKDHTIKF 208


Top