BLASTX nr result

ID: Rauwolfia21_contig00030744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00030744
         (729 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006447956.1| hypothetical protein CICLE_v10018124mg [Citr...    60   6e-07
ref|XP_006447958.1| hypothetical protein CICLE_v10014256mg [Citr...    58   4e-06
dbj|BAD34102.1| putative Avr9/Cf-9 rapidly elicited protein 141 ...    58   4e-06
gb|EAZ44808.1| hypothetical protein OsJ_29443 [Oryza sativa Japo...    58   4e-06
ref|XP_002332799.1| glutamate-gated kainate-type ion channel rec...    57   5e-06
gb|EOX93709.1| Glutamate receptor 1.1, putative [Theobroma cacao]      57   6e-06

>ref|XP_006447956.1| hypothetical protein CICLE_v10018124mg [Citrus clementina]
           gi|557550567|gb|ESR61196.1| hypothetical protein
           CICLE_v10018124mg [Citrus clementina]
          Length = 863

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
 Frame = -1

Query: 234 MEIKKRTGSPFRFLVFSSLVLII--------QLLNANLSPATASDEFKVGVILDMGS*TG 79
           ME+K +    F    FSSL+L+I        +L     + +  +DE  VGVILDM S +G
Sbjct: 1   MELKGKKEQAF----FSSLILLIIHLCPSCSELEKVKNNTSFTADEVHVGVILDMRSWSG 56

Query: 78  KSISSCIDMAVSDFYASNIDYRTRIV 1
           K  +SCI MA++DFYA N  Y+TR+V
Sbjct: 57  KISNSCISMAIADFYALNTHYKTRLV 82


>ref|XP_006447958.1| hypothetical protein CICLE_v10014256mg [Citrus clementina]
           gi|557550569|gb|ESR61198.1| hypothetical protein
           CICLE_v10014256mg [Citrus clementina]
          Length = 848

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
 Frame = -1

Query: 234 MEIKKRTGSPFRFLVFSSLVLIIQLLNANLSP--------ATASDEFKVGVILDMGS*TG 79
           ME+K R  +      FSSL+L++  L  + S         +  +DE  VGVILDM S  G
Sbjct: 1   MELKGRKQA-----FFSSLILLLIHLCPSCSEHKKVKNYTSLNADEVHVGVILDMRSWAG 55

Query: 78  KSISSCIDMAVSDFYASNIDYRTRIV 1
           K  +SCI MA+SDFYA N  Y+TR+V
Sbjct: 56  KISNSCISMAISDFYALNTHYKTRLV 81


>dbj|BAD34102.1| putative Avr9/Cf-9 rapidly elicited protein 141 [Oryza sativa
           Japonica Group]
          Length = 919

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 31/53 (58%), Positives = 37/53 (69%)
 Frame = -1

Query: 159 LNANLSPATASDEFKVGVILDMGS*TGKSISSCIDMAVSDFYASNIDYRTRIV 1
           LNA   P   +DEF VGVILD+GS  GK   + I MAV DFYAS+ +YRTR+V
Sbjct: 23  LNATNDPG--ADEFHVGVILDLGSLVGKEARTSISMAVEDFYASHKNYRTRLV 73


>gb|EAZ44808.1| hypothetical protein OsJ_29443 [Oryza sativa Japonica Group]
          Length = 572

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 31/53 (58%), Positives = 37/53 (69%)
 Frame = -1

Query: 159 LNANLSPATASDEFKVGVILDMGS*TGKSISSCIDMAVSDFYASNIDYRTRIV 1
           LNA   P   +DEF VGVILD+GS  GK   + I MAV DFYAS+ +YRTR+V
Sbjct: 23  LNATNDPG--ADEFHVGVILDLGSLVGKEARTSISMAVEDFYASHKNYRTRLV 73


>ref|XP_002332799.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|566212399|ref|XP_006373182.1|
           hypothetical protein POPTR_0017s09410g [Populus
           trichocarpa] gi|550319888|gb|ERP50979.1| hypothetical
           protein POPTR_0017s09410g [Populus trichocarpa]
          Length = 104

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 33/76 (43%), Positives = 46/76 (60%)
 Frame = -1

Query: 228 IKKRTGSPFRFLVFSSLVLIIQLLNANLSPATASDEFKVGVILDMGS*TGKSISSCIDMA 49
           +KK    PF  LVF  L L I  +   ++  TA+    VGV+LD+    G    +CI+MA
Sbjct: 1   MKKIPSKPFLSLVFFFLSLKIWFIEVLVAQNTATIPVNVGVVLDLEFSGGNIGLTCINMA 60

Query: 48  VSDFYASNIDYRTRIV 1
           +SDFYAS+ DY+TR+V
Sbjct: 61  LSDFYASHSDYKTRLV 76


>gb|EOX93709.1| Glutamate receptor 1.1, putative [Theobroma cacao]
          Length = 902

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
 Frame = -1

Query: 234 MEIKKRTGSPFRFLVFSSLVLIIQLLNANLSPATASD-------EFKVGVILDMGS*TGK 76
           ME+K++  +    L+F  + L I L N +  P   +        E  VGVILDMGS  GK
Sbjct: 1   MEMKRKNQN---LLLFVIIYLTICLENLSAKPVLTNKTGNEMAYEVHVGVILDMGSLEGK 57

Query: 75  SISSCIDMAVSDFYASNIDYRTRIV 1
            + SCI MA+SDFY+ +  Y+TR+V
Sbjct: 58  ILQSCISMAISDFYSGHHYYKTRLV 82


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