BLASTX nr result
ID: Rauwolfia21_contig00030637
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00030637
(576 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006492694.1| PREDICTED: pentatricopeptide repeat-containi... 109 4e-22
ref|XP_006445864.1| hypothetical protein CICLE_v10018300mg [Citr... 109 4e-22
gb|EMJ09700.1| hypothetical protein PRUPE_ppa026597mg [Prunus pe... 108 1e-21
ref|XP_004296167.1| PREDICTED: pentatricopeptide repeat-containi... 103 4e-20
emb|CBI16479.3| unnamed protein product [Vitis vinifera] 102 5e-20
ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|XP_004228769.1| PREDICTED: pentatricopeptide repeat-containi... 100 5e-19
ref|XP_004499642.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containi... 98 2e-18
gb|ESW30766.1| hypothetical protein PHAVU_002G180700g [Phaseolus... 94 2e-17
gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virg... 74 3e-11
ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata] gi... 73 6e-11
ref|XP_006485076.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_006436971.1| hypothetical protein CICLE_v10033814mg [Citr... 72 8e-11
ref|XP_006849578.1| hypothetical protein AMTR_s00024p00191430 [A... 72 1e-10
ref|XP_006479637.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_006339454.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_006443968.1| hypothetical protein CICLE_v10024388mg [Citr... 72 1e-10
ref|XP_006406136.1| hypothetical protein EUTSA_v10020066mg [Eutr... 72 1e-10
ref|XP_004511454.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
>ref|XP_006492694.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
Length = 462
Score = 109 bits (273), Expect = 4e-22
Identities = 57/112 (50%), Positives = 78/112 (69%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
DMLGRAG IEEAY +I++M EPN+VILRS++ ACRNHG++L D+ G
Sbjct: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHGVSS*DMSE 338
ANYVL ASV+S+S A +L +A+ KGLNKVPG SW++++ S+ +MS+
Sbjct: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSK 458
>ref|XP_006445864.1| hypothetical protein CICLE_v10018300mg [Citrus clementina]
gi|557548475|gb|ESR59104.1| hypothetical protein
CICLE_v10018300mg [Citrus clementina]
Length = 462
Score = 109 bits (273), Expect = 4e-22
Identities = 57/112 (50%), Positives = 78/112 (69%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
DMLGRAG IEEAY +I++M EPN+VILRS++ ACRNHG++L D+ G
Sbjct: 347 DMLGRAGLIEEAYHIIRNMPTEPNAVILRSFLGACRNHGQVLYLDDNLGKLLLKLEPELG 406
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHGVSS*DMSE 338
ANYVL ASV+S+S A +L +A+ KGLNKVPG SW++++ S+ +MS+
Sbjct: 407 ANYVLAASVSSLSGNWDTAAELMVAINQKGLNKVPGCSWVKVNDGSAEEMSK 458
>gb|EMJ09700.1| hypothetical protein PRUPE_ppa026597mg [Prunus persica]
Length = 462
Score = 108 bits (270), Expect = 1e-21
Identities = 60/107 (56%), Positives = 73/107 (68%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRAG IEEAY +IK+M MEPNSVILRS++ ACRNHG + D+K G
Sbjct: 347 DLLGRAGLIEEAYEIIKNMPMEPNSVILRSFLCACRNHGVAITLDDK-LRKLLISEPNLG 405
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHGVSS 323
ANYVL ASV+S+S A DLR+AMK GL KVPG SW+++ G S
Sbjct: 406 ANYVLAASVSSLSGCWNDAADLRVAMKQNGLVKVPGCSWVEVGGGGS 452
>ref|XP_004296167.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Fragaria vesca subsp. vesca]
Length = 336
Score = 103 bits (256), Expect = 4e-20
Identities = 55/104 (52%), Positives = 70/104 (67%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRAG +EEAY +IK+M MEPNSVILRS++ ACRNH + D+ G
Sbjct: 232 DLLGRAGLVEEAYEIIKNMPMEPNSVILRSFLGACRNHNIVFTLDDN-FRKVLTSESHLG 290
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHG 314
ANYVL A+V+SVS G A D+R++MK KG+ KVPG SW+ G
Sbjct: 291 ANYVLAANVSSVSGCWGDAADMRVSMKQKGVIKVPGCSWVDSGG 334
>emb|CBI16479.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 102 bits (255), Expect = 5e-20
Identities = 55/107 (51%), Positives = 70/107 (65%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
DM RAG IEEAY +IK+M MEPNSVILRS+I ACRN GR+ D G
Sbjct: 256 DMFARAGMIEEAYEIIKNMPMEPNSVILRSFIGACRNDGRVFGFDENLRRLLLEIEPDLG 315
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHGVSS 323
ANYVL + V+S+S A DLR++MK KGL KVPG S +++ G+++
Sbjct: 316 ANYVLASGVSSLSGCWNEAADLRVSMKEKGLKKVPGWSRVEVSGIAT 362
>ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
[Vitis vinifera]
Length = 461
Score = 101 bits (252), Expect = 1e-19
Identities = 58/116 (50%), Positives = 72/116 (62%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
DM RAG IEEAY +IK+M MEPNSVILRS+I ACRN GR+ D G
Sbjct: 346 DMFARAGMIEEAYEIIKNMPMEPNSVILRSFIGACRNDGRVFGFDENLRRLLLEIEPDLG 405
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHGVSS*DMSEGNLS 350
ANYVL + V+S+S A DLR++MK KGL KVPG S +++ G + + E LS
Sbjct: 406 ANYVLASGVSSLSGCWNEAADLRVSMKEKGLKKVPGWSRVEVSGSHTEETIEEALS 461
>ref|XP_004228769.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Solanum lycopersicum]
Length = 381
Score = 99.8 bits (247), Expect = 5e-19
Identities = 49/101 (48%), Positives = 66/101 (65%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
DM GRAG +EEAY +I+SM EPNSVILRS+ISAC++HG + C + G
Sbjct: 271 DMYGRAGELEEAYDIIRSMPTEPNSVILRSFISACKHHGHIPCAEENIREILLKIEPDLG 330
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQ 305
+NYVL +S++ + A+ LR +MK KG+ K PGSSW+Q
Sbjct: 331 SNYVLASSLSHLFGNCSDANSLRSSMKVKGIKKYPGSSWVQ 371
>ref|XP_004499642.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cicer arietinum]
Length = 426
Score = 99.4 bits (246), Expect = 6e-19
Identities = 54/102 (52%), Positives = 69/102 (67%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRAG I+EAY +IK+M +EPN+VILRS++ AC+NHG + D G
Sbjct: 326 DLLGRAGLIQEAYDIIKNMPLEPNAVILRSFLGACQNHGWVPSLD---ADLMSKLESELG 382
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQL 308
ANYVL A+V SV + A DLRLAMK KGL K+PG SWL++
Sbjct: 383 ANYVLTANVFSVHSSWKEASDLRLAMKRKGLKKLPGCSWLEV 424
>ref|XP_003532697.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 444
Score = 97.8 bits (242), Expect = 2e-18
Identities = 54/102 (52%), Positives = 67/102 (65%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRAG I+EAY +IK M MEPN VILRS++ ACRNHG + D+ G
Sbjct: 344 DLLGRAGFIQEAYDIIKGMPMEPNDVILRSFLGACRNHGWVPSLDD---DFLSELESELG 400
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQL 308
ANYVL A+V S A+DLR+AMK KGL KVPG SW+++
Sbjct: 401 ANYVLTANVFSTCASWKDANDLRVAMKLKGLKKVPGCSWVEV 442
>gb|ESW30766.1| hypothetical protein PHAVU_002G180700g [Phaseolus vulgaris]
Length = 448
Score = 94.4 bits (233), Expect = 2e-17
Identities = 50/102 (49%), Positives = 67/102 (65%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGR+G I+EAY +IK M MEPN VILRS+++ACRNHG + D G
Sbjct: 350 DLLGRSGLIQEAYDIIKGMPMEPNDVILRSFLAACRNHGWVPSLD---VDFLSKLESELG 406
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQL 308
ANYVL A+V S A+++R+AMK KGL K+PG SW+++
Sbjct: 407 ANYVLTANVFSTCASWKDANNIRVAMKQKGLEKIPGCSWVEV 448
>gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/102 (34%), Positives = 59/102 (57%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+ RAGR+E+A+ +++SM M+PN V++ S ++ACRNHG +
Sbjct: 336 DLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKYITDLDVKSH 395
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQL 308
+NYV+++++ + GA +R MKG GL K PG S +++
Sbjct: 396 SNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYSSIEI 437
>ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata
subsp. lyrata]
Length = 500
Score = 72.8 bits (177), Expect = 6e-11
Identities = 36/102 (35%), Positives = 58/102 (56%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+ RAGR+E+A +++SM M+PN V++ S ++ACRNHG K
Sbjct: 351 DLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRNHGNNTVLAEKLMKHLTDLNVKSH 410
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQL 308
+NYV+++++ + GA +R MKG GL K PG S +++
Sbjct: 411 SNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEI 452
>ref|XP_006485076.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Citrus sinensis]
Length = 537
Score = 72.4 bits (176), Expect = 8e-11
Identities = 42/105 (40%), Positives = 59/105 (56%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRAG IEEAY +I SM MEP+ V+ R+ +SACR R+ G
Sbjct: 313 DLLGRAGHIEEAYGLITSMTMEPDVVVWRALLSACRTFKRL----ELGEVAIANISRLMG 368
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHGV 317
+YVL++++ A+++R MK KG+ K G SWL+L GV
Sbjct: 369 GDYVLLSNMYCYLKRWDTAENVREIMKKKGVRKSQGKSWLELAGV 413
>ref|XP_006436971.1| hypothetical protein CICLE_v10033814mg [Citrus clementina]
gi|557539167|gb|ESR50211.1| hypothetical protein
CICLE_v10033814mg [Citrus clementina]
Length = 540
Score = 72.4 bits (176), Expect = 8e-11
Identities = 42/105 (40%), Positives = 59/105 (56%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRAG IEEAY +I SM MEP+ V+ R+ +SACR R+ G
Sbjct: 316 DLLGRAGHIEEAYGLITSMTMEPDVVVWRALLSACRTFKRL----ELGEVAIANISRLMG 371
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHGV 317
+YVL++++ A+++R MK KG+ K G SWL+L GV
Sbjct: 372 GDYVLLSNMYCYLQRWDTAENVREIMKKKGVRKSQGKSWLELAGV 416
>ref|XP_006849578.1| hypothetical protein AMTR_s00024p00191430 [Amborella trichopoda]
gi|548853153|gb|ERN11159.1| hypothetical protein
AMTR_s00024p00191430 [Amborella trichopoda]
Length = 387
Score = 72.0 bits (175), Expect = 1e-10
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHG-------RMLCEDN----KXX 149
DM GRAG ++EAY +I M MEPN VILRS++ AC HG C + K
Sbjct: 275 DMYGRAGMVDEAYGVIMGMPMEPNPVILRSFMGACMAHGVGERLGFMGACMGHGVGEKVG 334
Query: 150 XXXXXXXXXXGANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQ 305
G NYVLVA+V + + ++LR M+ KGL KV G SW++
Sbjct: 335 RQLLEGEPSLGKNYVLVANVCARAGRWDLVEELRGEMREKGLKKVVGCSWVE 386
>ref|XP_006479637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
[Citrus sinensis]
Length = 993
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/102 (35%), Positives = 57/102 (55%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRA +EEAY ++SMQ+EP + + + + ACR H + G
Sbjct: 765 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 824
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQL 308
NYVL+++V + S + +R+ M+G GL K PGSSW+++
Sbjct: 825 -NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 865
>ref|XP_006339454.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X1 [Solanum tuberosum]
gi|565344726|ref|XP_006339455.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g27610-like isoform X2 [Solanum tuberosum]
Length = 797
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/106 (35%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRM-LCEDNKXXXXXXXXXXXX 179
D+LGRAG+I+EA ++ M +EP++ + ++ ++ACR HG L E K
Sbjct: 570 DLLGRAGKIQEAEKLVNEMDIEPDATVWKALLAACRVHGNTDLAE--KASMALFQLEPQD 627
Query: 180 GANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHGV 317
YV+++++ S + A LR M KGLNK PG SW++++GV
Sbjct: 628 AVPYVMLSNIYSAAGKWENAAKLRRKMNSKGLNKEPGYSWIEMNGV 673
>ref|XP_006443968.1| hypothetical protein CICLE_v10024388mg [Citrus clementina]
gi|557546230|gb|ESR57208.1| hypothetical protein
CICLE_v10024388mg [Citrus clementina]
Length = 958
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/102 (35%), Positives = 57/102 (55%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRA +EEAY ++SMQ+EP + + + + ACR H + G
Sbjct: 730 DLLGRANHLEEAYQFVRSMQIEPTAEVWCALLGACRVHSNKELGEIVAKKLLELDPGNPG 789
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQL 308
NYVL+++V + S + +R+ M+G GL K PGSSW+++
Sbjct: 790 -NYVLISNVFAASRKWKDVEQVRMRMRGSGLKKTPGSSWIEI 830
>ref|XP_006406136.1| hypothetical protein EUTSA_v10020066mg [Eutrema salsugineum]
gi|557107282|gb|ESQ47589.1| hypothetical protein
EUTSA_v10020066mg [Eutrema salsugineum]
Length = 836
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/104 (40%), Positives = 59/104 (56%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRAG +EEA +IKSM MEPN VI S +SACR G + G
Sbjct: 613 DLLGRAGLLEEALQLIKSMPMEPNDVIWNSLLSACRGQGNVEMAAYAAERIQVLAPERTG 672
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHG 314
+YVL+++V + + +RL+MK KGL K PG+S +++ G
Sbjct: 673 -SYVLLSNVYASAGRWNDVAKVRLSMKEKGLRKPPGTSLVEIRG 715
>ref|XP_004511454.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Cicer arietinum]
Length = 826
Score = 71.6 bits (174), Expect = 1e-10
Identities = 41/105 (39%), Positives = 61/105 (58%)
Frame = +3
Query: 3 DMLGRAGRIEEAYCMIKSMQMEPNSVILRSYISACRNHGRMLCEDNKXXXXXXXXXXXXG 182
D+LGRAG +EEA ++KSM MEPN VI S+++ACR H + G
Sbjct: 599 DLLGRAGLLEEAIDLMKSMPMEPNDVIWGSFLAACRKHKNVELARYADEKITQLVPERVG 658
Query: 183 ANYVLVASVTSVSNYHGGADDLRLAMKGKGLNKVPGSSWLQLHGV 317
+VLV+++ + + +RL MK KG+ KVPGSS +++HG+
Sbjct: 659 I-HVLVSNIYASAGKWTDVARVRLEMKEKGVQKVPGSSSIEVHGL 702