BLASTX nr result

ID: Rauwolfia21_contig00030627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00030627
         (205 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236264.1| PREDICTED: leucine-rich repeat protein SHOC-...    57   2e-08
ref|XP_006344469.1| PREDICTED: plant intracellular Ras-group-rel...    56   2e-08
ref|XP_006296704.1| hypothetical protein CARUB_v10013520mg [Caps...    47   8e-06
gb|EPS71404.1| hypothetical protein M569_03354 [Genlisea aurea]        55   1e-05

>ref|XP_004236264.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Solanum
           lycopersicum]
          Length = 526

 Score = 57.4 bits (137), Expect(2) = 2e-08
 Identities = 25/41 (60%), Positives = 35/41 (85%)
 Frame = +3

Query: 24  HFELIEKMPHLKNPKITSAIGLAVADVVQSRSVLKTLGKQP 146
           HF++ E+MPHL +PK+ SA+  AVADV Q+RS+LKTLG++P
Sbjct: 48  HFDITERMPHLTDPKVVSAMRSAVADVSQTRSMLKTLGERP 88



 Score = 26.6 bits (57), Expect(2) = 2e-08
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +2

Query: 152 ESVDNAKVKLAEVEANLS 205
           E VD A+VKLAE++A++S
Sbjct: 91  ELVDTARVKLAEIDADMS 108


>ref|XP_006344469.1| PREDICTED: plant intracellular Ras-group-related LRR protein 1-like
           [Solanum tuberosum]
          Length = 526

 Score = 56.2 bits (134), Expect(2) = 2e-08
 Identities = 24/41 (58%), Positives = 35/41 (85%)
 Frame = +3

Query: 24  HFELIEKMPHLKNPKITSAIGLAVADVVQSRSVLKTLGKQP 146
           HF++ E+MPHL +PK+ +A+  AVADV Q+RS+LKTLG++P
Sbjct: 48  HFDITERMPHLTDPKVVNAMRSAVADVSQTRSMLKTLGERP 88



 Score = 27.7 bits (60), Expect(2) = 2e-08
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = +2

Query: 152 ESVDNAKVKLAEVEANLS 205
           E VD A+VKLAE+EA++S
Sbjct: 91  ELVDTARVKLAEIEADMS 108


>ref|XP_006296704.1| hypothetical protein CARUB_v10013520mg [Capsella rubella]
           gi|482565413|gb|EOA29602.1| hypothetical protein
           CARUB_v10013520mg [Capsella rubella]
          Length = 498

 Score = 46.6 bits (109), Expect(2) = 8e-06
 Identities = 18/47 (38%), Positives = 32/47 (68%)
 Frame = +3

Query: 6   SSREPHHFELIEKMPHLKNPKITSAIGLAVADVVQSRSVLKTLGKQP 146
           S    H  E++ +MPHL  P + +++  A++DV ++RS+L+TLG +P
Sbjct: 41  SPSSSHSIEIVTQMPHLTQPDVLASMTSAISDVAETRSILRTLGPRP 87



 Score = 28.5 bits (62), Expect(2) = 8e-06
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 152 ESVDNAKVKLAEVEANLS 205
           ESVD A+VKL+E+E++LS
Sbjct: 90  ESVDKARVKLSEIESSLS 107


>gb|EPS71404.1| hypothetical protein M569_03354 [Genlisea aurea]
          Length = 489

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +3

Query: 24  HFELIEKMPHLKNPKITSAIGLAVADVVQSRSVLKTLGKQP 146
           +FE+ E+MPHL NP + SA+  AV DVVQSRS L+ LGK+P
Sbjct: 49  YFEIAERMPHLNNPALISAMRRAVGDVVQSRSTLQVLGKRP 89


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