BLASTX nr result

ID: Rauwolfia21_contig00030510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00030510
         (354 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19144.3| unnamed protein product [Vitis vinifera]               61   2e-07
gb|EOY16032.1| Mitochondrial transcription termination factor fa...    60   3e-07

>emb|CBI19144.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
 Frame = +3

Query: 108 MTLHICKRLISQAIKNHSH-FQKSRFR--LSVVFYSSS---VEKPTEITSLVFDLLRRHE 269
           MTL+ICK LIS  +K+  H   K  F   LS++F+SSS    +KP    S    L++RH+
Sbjct: 1   MTLYICKSLISLYLKSSQHHLHKPHFSCSLSLLFFSSSGPQKKKPAIPVSTADYLIKRHQ 60

Query: 270 FSSKTASKVASELSYLKSAERCHSVLSF 353
           FS +TA   AS ++YLK  E+  S+L+F
Sbjct: 61  FSQETALTAASVITYLKKPEKSDSILAF 88


>gb|EOY16032.1| Mitochondrial transcription termination factor family protein,
           putative [Theobroma cacao]
          Length = 380

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
 Frame = +3

Query: 108 MTLHICKRLISQAIKNHSHFQK--SRFRLSVVFYSSSVEKPTEITSLVFD--LLRRHEFS 275
           MT  I + LIS ++   SHFQK  S + +SVVF+SSS        S  F    +++H FS
Sbjct: 1   MTPPIIRTLISLSLYRSSHFQKPISSYSISVVFFSSSTTTRESKPSFDFTDHFIKKHNFS 60

Query: 276 SKTASKVASELSYLKSAERCHSVLSF 353
            + A K AS L+YL+  ++C +VLSF
Sbjct: 61  PELALKAASSLNYLRKPDKCDNVLSF 86


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