BLASTX nr result

ID: Rauwolfia21_contig00030379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00030379
         (241 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ25607.1| hypothetical protein PRUPE_ppa021166mg [Prunus pe...    73   3e-11
ref|XP_002305847.2| hypothetical protein POPTR_0004s09300g [Popu...    71   2e-10
gb|EOY06100.1| Ubiquitin 4, putative isoform 1 [Theobroma cacao]...    70   3e-10
ref|XP_006489698.1| PREDICTED: polyubiquitin-C-like isoform X2 [...    67   2e-09
ref|XP_006489697.1| PREDICTED: polyubiquitin-C-like isoform X1 [...    67   2e-09
ref|XP_006420267.1| hypothetical protein CICLE_v10006421mg [Citr...    66   4e-09
ref|XP_006344864.1| PREDICTED: polyubiquitin-like [Solanum tuber...    56   6e-06

>gb|EMJ25607.1| hypothetical protein PRUPE_ppa021166mg [Prunus persica]
          Length = 296

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/76 (43%), Positives = 55/76 (72%)
 Frame = +3

Query: 9   QEIFFNGDCLQDDKKLVDCGIQQNSTLKIFPQNSEPLTLNIKIPSDKKVIVVQAHIYDSI 188
           QE+F  GD L D + LVDCG+Q++ST+ +  QN+  + L +K+PS ++ I ++A  +D+I
Sbjct: 32  QELFLGGDMLVDCQSLVDCGVQRDSTVHLVLQNTVGIKLFVKLPSSQRTIEIEAKAHDTI 91

Query: 189 QNVKSLISAKEGIHSD 236
           +N+K++I AK+ I SD
Sbjct: 92  RNIKAMIQAKKMIPSD 107


>ref|XP_002305847.2| hypothetical protein POPTR_0004s09300g [Populus trichocarpa]
           gi|550340656|gb|EEE86358.2| hypothetical protein
           POPTR_0004s09300g [Populus trichocarpa]
          Length = 388

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/73 (46%), Positives = 54/73 (73%)
 Frame = +3

Query: 9   QEIFFNGDCLQDDKKLVDCGIQQNSTLKIFPQNSEPLTLNIKIPSDKKVIVVQAHIYDSI 188
           QE+FFNGD L+DD+++VD GI +++TL +  Q+S  + L + IPS +K +VV+A  YD++
Sbjct: 58  QELFFNGDRLKDDQRVVDYGIPKDATLHMILQSSVGVKLLVVIPSRQKSVVVEARTYDTV 117

Query: 189 QNVKSLISAKEGI 227
           Q +K++I  KE I
Sbjct: 118 QKIKAVILEKEQI 130


>gb|EOY06100.1| Ubiquitin 4, putative isoform 1 [Theobroma cacao]
           gi|508714204|gb|EOY06101.1| Ubiquitin 4, putative
           isoform 1 [Theobroma cacao] gi|508714205|gb|EOY06102.1|
           Ubiquitin 4, putative isoform 1 [Theobroma cacao]
          Length = 380

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/77 (42%), Positives = 55/77 (71%)
 Frame = +3

Query: 6   LQEIFFNGDCLQDDKKLVDCGIQQNSTLKIFPQNSEPLTLNIKIPSDKKVIVVQAHIYDS 185
           +Q++F+ G  L+D ++LVD GI +NSTL +  Q+   + L +KIPS+++ I+V+A   ++
Sbjct: 55  IQDLFYAGQLLKDGERLVDHGIMRNSTLHLVLQDFIGVKLFVKIPSEQRTILVEARANET 114

Query: 186 IQNVKSLISAKEGIHSD 236
           +Q++KSLI   EGI SD
Sbjct: 115 VQSIKSLIQVTEGIESD 131


>ref|XP_006489698.1| PREDICTED: polyubiquitin-C-like isoform X2 [Citrus sinensis]
          Length = 426

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/75 (46%), Positives = 50/75 (66%)
 Frame = +3

Query: 12  EIFFNGDCLQDDKKLVDCGIQQNSTLKIFPQNSEPLTLNIKIPSDKKVIVVQAHIYDSIQ 191
           ++FF GD L+  + LVD GI+ NSTL    QN   + L +KIP+++   VV+A  Y ++Q
Sbjct: 28  DLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQ 86

Query: 192 NVKSLISAKEGIHSD 236
           N+KS+I  KEGI SD
Sbjct: 87  NIKSMIQVKEGIQSD 101


>ref|XP_006489697.1| PREDICTED: polyubiquitin-C-like isoform X1 [Citrus sinensis]
          Length = 457

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/75 (46%), Positives = 50/75 (66%)
 Frame = +3

Query: 12  EIFFNGDCLQDDKKLVDCGIQQNSTLKIFPQNSEPLTLNIKIPSDKKVIVVQAHIYDSIQ 191
           ++FF GD L+  + LVD GI+ NSTL    QN   + L +KIP+++   VV+A  Y ++Q
Sbjct: 59  DLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQ 117

Query: 192 NVKSLISAKEGIHSD 236
           N+KS+I  KEGI SD
Sbjct: 118 NIKSMIQVKEGIQSD 132


>ref|XP_006420267.1| hypothetical protein CICLE_v10006421mg [Citrus clementina]
           gi|557522140|gb|ESR33507.1| hypothetical protein
           CICLE_v10006421mg [Citrus clementina]
          Length = 426

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/75 (45%), Positives = 50/75 (66%)
 Frame = +3

Query: 12  EIFFNGDCLQDDKKLVDCGIQQNSTLKIFPQNSEPLTLNIKIPSDKKVIVVQAHIYDSIQ 191
           ++FF GD L+  + LVD GI+ NSTL    QN   + L +KIP+++   VV+A  Y ++Q
Sbjct: 28  DLFFAGDRLEAGR-LVDYGIRNNSTLHFLHQNLSEMKLFVKIPTNQTATVVEAMPYHTVQ 86

Query: 192 NVKSLISAKEGIHSD 236
           N+K++I  KEGI SD
Sbjct: 87  NIKTMIQVKEGIQSD 101


>ref|XP_006344864.1| PREDICTED: polyubiquitin-like [Solanum tuberosum]
          Length = 134

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   CLQEIFFNGDCLQDDK-KLVDCGIQQNSTLKIFPQNSEPLTLNIKIPSDKKVIVVQAHIY 179
           CLQ++F     L DD+ KL+DCGI +NSTL  +  NS P    +K P     I V +  +
Sbjct: 56  CLQQLFSKDVRLTDDEQKLMDCGIIENSTLHAYIDNSVPKVFLVKRPHANVTITVYSRTF 115

Query: 180 DSIQNVKSLISAK 218
           D+IQ+VK  I  K
Sbjct: 116 DTIQDVKCRIGVK 128


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