BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00030186
         (1034 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containi...   516   e-144
ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containi...   515   e-143
gb|EMJ26368.1| hypothetical protein PRUPE_ppa002283mg [Prunus pe...   509   e-142
emb|CBI29622.3| unnamed protein product [Vitis vinifera]              505   e-140
ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi...   505   e-140
emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]   505   e-140
gb|EOY26402.1| Pentatricopeptide repeat superfamily protein isof...   494   e-137
ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containi...   493   e-137
ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containi...   486   e-135
ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containi...   486   e-135
gb|EOY26401.1| Pentatricopeptide repeat superfamily protein isof...   466   e-129
gb|ABK26521.1| unknown [Picea sitchensis]                             347   3e-93
tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea m...   346   8e-93
ref|XP_004956593.1| PREDICTED: pentatricopeptide repeat-containi...   340   4e-91
ref|XP_002323645.2| pentatricopeptide repeat-containing family p...   340   5e-91
ref|XP_006290208.1| hypothetical protein CARUB_v10003899mg [Caps...   340   5e-91
ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   340   5e-91
ref|XP_002309169.1| pentatricopeptide repeat-containing family p...   340   7e-91
ref|XP_002872815.1| pentatricopeptide repeat-containing protein ...   338   3e-90
ref|XP_006393385.1| hypothetical protein EUTSA_v10011302mg [Eutr...   337   3e-90

>ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Solanum lycopersicum]
          Length = 758

 Score =  516 bits (1329), Expect = e-144
 Identities = 244/337 (72%), Positives = 291/337 (86%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I LSISGYN+LI+MYSKCG+M  A+K+FQ M  RDVISYN+LITG AAYG+ IE+V LL 
Sbjct: 422  IKLSISGYNALIFMYSKCGNMKDAEKVFQSMEARDVISYNTLITGVAAYGNAIEAVELLW 481

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
            KMK+E+IEPDR+TYIG+LTACSH G ++EG+++F+SI+ PD DHYACMVDL  R GKLDE
Sbjct: 482  KMKKENIEPDRITYIGVLTACSHGGLLKEGQRIFDSIKDPDSDHYACMVDLLGRNGKLDE 541

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AK LI SM MHPHAGVYGSLL+ASRVH RIDL EFAA++L E+EPENSGNYVLLSNIYAS
Sbjct: 542  AKCLIGSMAMHPHAGVYGSLLHASRVHKRIDLGEFAASKLFEIEPENSGNYVLLSNIYAS 601

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
            + RWEDVDR+RGLM   GVKKTTGWSW+EH G++HKFIVGD SHE +  I+RVL E +++
Sbjct: 602  ARRWEDVDRVRGLMTIGGVKKTTGWSWIEHKGEMHKFIVGDRSHERTADIHRVLFETEKK 661

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            M+ AGY+ADKSCVL+DV       M+GTHSEK+A+AFA+LV+EP S IRV+KNLR+CRDC
Sbjct: 662  MKLAGYMADKSCVLKDVEEEEMEEMVGTHSEKMAVAFALLVTEPHSVIRVVKNLRICRDC 721

Query: 901  HTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            HTAIKIIS++EGREIIVRDNNRFHCF +G CSCKD+W
Sbjct: 722  HTAIKIISKMEGREIIVRDNNRFHCFSEGQCSCKDYW 758



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 36/131 (27%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
 Frame = +1

Query: 4   YLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSK 183
           Y ++  +N++I  Y++ G +  A+ +F ++  ++VIS+NS+I G+A  G    ++ L   
Sbjct: 322 YKNLVTWNAMISAYARVGDLASARGLFDKVPEKNVISWNSIIAGYAQNGESKVAIDLFKD 381

Query: 184 MKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAP----DIDHYACMVDLYSRVGK 351
           M  + + PD VT + +++AC H G++E G      ++       I  Y  ++ +YS+ G 
Sbjct: 382 MIAKDVLPDEVTMVSVISACGHLGALEFGNWAVNFLEKHQIKLSISGYNALIFMYSKCGN 441

Query: 352 LDEAKRLIDSM 384
           + +A+++  SM
Sbjct: 442 MKDAEKVFQSM 452



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 49/199 (24%), Positives = 107/199 (53%), Gaps = 9/199 (4%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESI 201
           + +++  YS+   +  A+K F +M  R V+S+N++++G+A  G   E + L ++M    +
Sbjct: 195 WTAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCAEEVIKLFNEMMSCEV 254

Query: 202 EPDRVTYIGILTACSHSG--SIEEGKKVFESIQAPDIDHYA--CMVDLYSRVGKLDEAKR 369
            PD  T++ +++ CS  G  S+ EG     + +   ++ +A   ++D+Y++ G L  A++
Sbjct: 255 CPDETTWVTVISLCSSHGDVSLAEGLVKMINEKGVRLNCFAKTALLDMYAKCGNLAMARK 314

Query: 370 LIDSMPMHPHAGVYGSLLNA-SRVHNRIDLAEFAANRLLELEPEN---SGNYVLLSNIYA 537
           + D +  + +   + ++++A +RV    DLA  +A  L +  PE    S N ++    YA
Sbjct: 315 IFDELGTYKNLVTWNAMISAYARVG---DLA--SARGLFDKVPEKNVISWNSIIAG--YA 367

Query: 538 SSGRWE-DVDRIRGLMKKE 591
            +G  +  +D  + ++ K+
Sbjct: 368 QNGESKVAIDLFKDMIAKD 386


>ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Solanum tuberosum]
          Length = 758

 Score =  515 bits (1326), Expect = e-143
 Identities = 245/337 (72%), Positives = 291/337 (86%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I LSISG N+LI+MYSKCG+M  A+K+FQ M +RDVISYN+LITGFAAYG+ +E+V LL 
Sbjct: 422  IKLSISGDNALIFMYSKCGNMKDAEKVFQSMDSRDVISYNTLITGFAAYGNAVEAVELLW 481

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
            KMK+E+IEPDR+TY+G+LTACSH G +EEG+++F+SI+ PD DHYACMVDL  R GKLDE
Sbjct: 482  KMKKENIEPDRITYVGVLTACSHGGLLEEGQRIFDSIKDPDSDHYACMVDLLGRNGKLDE 541

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AK LI SM MHPHAGVYGSLL+ASRVH RIDL EFAA++L E+EPENSGNYVLLSNIYAS
Sbjct: 542  AKCLIGSMAMHPHAGVYGSLLHASRVHKRIDLGEFAASKLFEIEPENSGNYVLLSNIYAS 601

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
            + RWEDVDR+RGLM   GVKKTTGWSW+EH G++HKFIVGD SHE S  I+RVLSE +++
Sbjct: 602  ARRWEDVDRVRGLMTIGGVKKTTGWSWIEHEGEMHKFIVGDRSHERSADIHRVLSETEKK 661

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            MR AGY+AD SCVL+DV       M+GTHSEKLA+AFA+LV+EP S IRV+KNLR+CRDC
Sbjct: 662  MRLAGYMADTSCVLKDVEEEEMEEMVGTHSEKLAVAFALLVTEPHSVIRVVKNLRICRDC 721

Query: 901  HTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            HTAIKIIS++EGREIIVRDNNRFH F +G CSCKD+W
Sbjct: 722  HTAIKIISKMEGREIIVRDNNRFHSFSEGHCSCKDYW 758



 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 35/131 (26%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
 Frame = +1

Query: 4   YLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSK 183
           Y ++  +N++I  Y++ G +  A+++F  +  ++VIS+NS+I G+A  G    ++ L   
Sbjct: 322 YKNLVTWNAMISAYARVGDLASARRLFDTVPEKNVISWNSIIAGYAQNGQSKVAIDLFKD 381

Query: 184 MKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAP----DIDHYACMVDLYSRVGK 351
           M  + + PD VT + +++AC H G++E G      ++       I     ++ +YS+ G 
Sbjct: 382 MIAKDVLPDEVTMVSVISACGHLGALEFGNWAVNFLEKHQIKLSISGDNALIFMYSKCGN 441

Query: 352 LDEAKRLIDSM 384
           + +A+++  SM
Sbjct: 442 MKDAEKVFQSM 452



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 49/199 (24%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESI 201
           + +++  YS+   +  A+K F +M  R V+S+N++++G+A  G   E + L ++M    +
Sbjct: 195 WTAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCSEEVIRLFNEMMSCGV 254

Query: 202 EPDRVTYIGILTACSHSG--SIEEGKKVFESIQAPDIDHYA--CMVDLYSRVGKLDEAKR 369
            PD  T++ +++ CS  G  S+ EG     + +    + +A   ++D+Y++ G L  +++
Sbjct: 255 CPDETTWVTVISLCSSHGDASLAEGLVKMINDKGVRFNCFAKTALLDMYAKCGNLAMSRK 314

Query: 370 LIDSMPMHPHAGVYGSLLNA-SRVHNRIDLAEFAANRLLELEPEN---SGNYVLLSNIYA 537
           + D +  + +   + ++++A +RV    DLA  +A RL +  PE    S N ++    YA
Sbjct: 315 IFDELGTYKNLVTWNAMISAYARVG---DLA--SARRLFDTVPEKNVISWNSIIAG--YA 367

Query: 538 SSGRWE-DVDRIRGLMKKE 591
            +G+ +  +D  + ++ K+
Sbjct: 368 QNGQSKVAIDLFKDMIAKD 386


>gb|EMJ26368.1| hypothetical protein PRUPE_ppa002283mg [Prunus persica]
          Length = 692

 Score =  509 bits (1310), Expect = e-142
 Identities = 241/337 (71%), Positives = 287/337 (85%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I LSISGYNSLI++YSKCGSM  AK+ FQEM TRDV+SYN+LI GFAA+G G+E+V LLS
Sbjct: 356  IKLSISGYNSLIFLYSKCGSMDDAKRTFQEMTTRDVVSYNTLIAGFAAHGHGMEAVKLLS 415

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
            KMK E +EPDRVTYI ILTACSH+G +EEG KVFESI+APD DHYAC++DL  RVGKLDE
Sbjct: 416  KMKGEFVEPDRVTYIVILTACSHAGMLEEGWKVFESIKAPDADHYACVIDLLGRVGKLDE 475

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AK++ID MP  P+AGVYGSLLNASR+H RIDL EFAA+ L ELEP NSGNY+LLSNIYAS
Sbjct: 476  AKKIIDDMPKEPYAGVYGSLLNASRIHKRIDLGEFAASTLFELEPHNSGNYILLSNIYAS 535

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
            +GRW+DV R+R LM+K GVKK TGWSWVE+ GK+HKFIVGD SHE S  +YRVL+E+  +
Sbjct: 536  AGRWDDVVRVRELMRKVGVKKATGWSWVEYKGKLHKFIVGDKSHERSDDVYRVLAELGRK 595

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            MRN+GY+ADK+CVLRDV       M+GTHSEKLA+ FA+LV++  + IRV+KNLRVC DC
Sbjct: 596  MRNSGYMADKTCVLRDVEEEEKEEMVGTHSEKLAVCFALLVTDAEAVIRVVKNLRVCWDC 655

Query: 901  HTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            HTA+K+IS LEGR+II+RDNNRFHCF DG+CSC D+W
Sbjct: 656  HTAMKMISNLEGRKIILRDNNRFHCFSDGICSCGDYW 692


>emb|CBI29622.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  505 bits (1301), Expect = e-140
 Identities = 234/337 (69%), Positives = 291/337 (86%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I LSISG+N++I+MYS+CGSM  AK++FQEM TRDV+SYN+LI+GFAA+G G+E++ L+S
Sbjct: 267  IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMS 326

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
             MK+  IEPDRVT+IG+LTACSH+G +EEG+KVFESI+ P IDHYACMVDL  RVG+L++
Sbjct: 327  TMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELED 386

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AKR ++ MPM PHAGVYGSLLNASR+H +++L E AAN+L ELEP+NSGN++LLSNIYAS
Sbjct: 387  AKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYAS 446

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
            +GRW+DV+RIR  MKK GVKKTTGWSWVE+ GK+HKFIV D SHE S  IY++L E++++
Sbjct: 447  AGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKK 506

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            MR AGY+ADKSCVLRDV       ++GTHSEKLAI +A+LVSE  + IRV+KNLRVC DC
Sbjct: 507  MREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDC 566

Query: 901  HTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            HTAIK+IS+LEGR IIVRDNNRFHCF DG+CSCKD+W
Sbjct: 567  HTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 603



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKM-KQES 198
           +N++I  Y + G +  A+K+F  M  R+V+++NS+I G+A  G    ++ L  +M   + 
Sbjct: 172 WNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 231

Query: 199 IEPDRVTYIGILTACSHSGSIEEGKKVF----ESIQAPDIDHYACMVDLYSRVGKLDEAK 366
           + PD VT + +++AC H G++E G  V     E+     I  +  M+ +YSR G +++AK
Sbjct: 232 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 291

Query: 367 RLIDSMPMHPHAGVYGSLLNASRVH 441
           R+   M        Y +L++    H
Sbjct: 292 RVFQEMATRDVVS-YNTLISGFAAH 315


>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Vitis vinifera]
          Length = 729

 Score =  505 bits (1301), Expect = e-140
 Identities = 234/337 (69%), Positives = 291/337 (86%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I LSISG+N++I+MYS+CGSM  AK++FQEM TRDV+SYN+LI+GFAA+G G+E++ L+S
Sbjct: 393  IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMS 452

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
             MK+  IEPDRVT+IG+LTACSH+G +EEG+KVFESI+ P IDHYACMVDL  RVG+L++
Sbjct: 453  TMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELED 512

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AKR ++ MPM PHAGVYGSLLNASR+H +++L E AAN+L ELEP+NSGN++LLSNIYAS
Sbjct: 513  AKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYAS 572

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
            +GRW+DV+RIR  MKK GVKKTTGWSWVE+ GK+HKFIV D SHE S  IY++L E++++
Sbjct: 573  AGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKK 632

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            MR AGY+ADKSCVLRDV       ++GTHSEKLAI +A+LVSE  + IRV+KNLRVC DC
Sbjct: 633  MREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDC 692

Query: 901  HTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            HTAIK+IS+LEGR IIVRDNNRFHCF DG+CSCKD+W
Sbjct: 693  HTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
 Frame = +1

Query: 28  SLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKM-KQESIE 204
           +L+ MY+K G +  A+K+F  M  R+V+++NS+I G+A  G    ++ L  +M   + + 
Sbjct: 300 ALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLT 359

Query: 205 PDRVTYIGILTACSHSGSIEEGKKVF----ESIQAPDIDHYACMVDLYSRVGKLDEAKRL 372
           PD VT + +++AC H G++E G  V     E+     I  +  M+ +YSR G +++AKR+
Sbjct: 360 PDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRV 419

Query: 373 IDSMPMHPHAGVYGSLLNASRVH 441
              M        Y +L++    H
Sbjct: 420 FQEMATRDVVS-YNTLISGFAAH 441



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESI 201
           + +++  Y+K   +  A++ F  M  R V+S+N++++G+A  G   E++ L  +M    I
Sbjct: 197 WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGI 256

Query: 202 EPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDID----HYACMVDLYSRVGKLDEAKR 369
           EPD  T++ +++ACS  G       +  ++    I         ++D+Y++ G LD A++
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARK 316

Query: 370 LIDSMP 387
           L ++MP
Sbjct: 317 LFNTMP 322


>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  505 bits (1301), Expect = e-140
 Identities = 234/337 (69%), Positives = 291/337 (86%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I LSISG+N++I+MYS+CGSM  AK++FQEM TRDV+SYN+LI+GFAA+G G+E++ L+S
Sbjct: 425  IKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMS 484

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
             MK+  IEPDRVT+IG+LTACSH+G +EEG+KVFESI+ P IDHYACMVDL  RVG+L++
Sbjct: 485  TMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELED 544

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AKR ++ MPM PHAGVYGSLLNASR+H +++L E AAN+L ELEP+NSGN++LLSNIYAS
Sbjct: 545  AKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYAS 604

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
            +GRW+DV+RIR  MKK GVKKTTGWSWVE+ GK+HKFIV D SHE S  IY++L E++++
Sbjct: 605  AGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKK 664

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            MR AGY+ADKSCVLRDV       ++GTHSEKLAI +A+LVSE  + IRV+KNLRVC DC
Sbjct: 665  MREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDC 724

Query: 901  HTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            HTAIK+IS+LEGR IIVRDNNRFHCF DG+CSCKD+W
Sbjct: 725  HTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKM-KQES 198
           +N++I  Y++ G++  A+++F  M  R+V+++NS+I G+A  G    ++ L  +M   + 
Sbjct: 330 WNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKK 389

Query: 199 IEPDRVTYIGILTACSHSGSIEEGKKVF----ESIQAPDIDHYACMVDLYSRVGKLDEAK 366
           + PD VT + +++AC H G++E G  V     E+     I  +  M+ +YSR G +++AK
Sbjct: 390 LTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAK 449

Query: 367 RLIDSMPMHPHAGVYGSLLNASRVH 441
           R+   M        Y +L++    H
Sbjct: 450 RVFQEMATRDVVS-YNTLISGFAAH 473



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 35/146 (23%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESI 201
           + +++  Y+K   +  A++ F  M  R V+S+N++++G+A  G   E + L  +M    I
Sbjct: 197 WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGI 256

Query: 202 EPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDID----HYACMVDLYSRVGKLDEAKR 369
           EPD  T++ +++ACS  G       +  ++    I         ++D+Y++ G +  A+R
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARR 316

Query: 370 LIDSMPMHPHAGVYGSLLNA-SRVHN 444
           + D +  + ++  + ++++A +RV N
Sbjct: 317 IFDELGAYRNSVTWNAMISAYTRVGN 342


>gb|EOY26402.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
            cacao] gi|508779147|gb|EOY26403.1| Pentatricopeptide
            repeat superfamily protein isoform 2 [Theobroma cacao]
          Length = 777

 Score =  494 bits (1272), Expect = e-137
 Identities = 232/337 (68%), Positives = 281/337 (83%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I LSISGYN+LI+MYSKCGSM  A++IFQEM  RD ISYN+L++GF A+G GIE+V L+S
Sbjct: 441  IKLSISGYNTLIFMYSKCGSMKDAERIFQEMKRRDTISYNALVSGFGAHGRGIEAVELMS 500

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
            +M++E IEPD +TYIG+LTACSH+  ++EG++VFESI+ P +DHYACMVDL  RVG+LDE
Sbjct: 501  RMRKEGIEPDHITYIGVLTACSHARLLKEGRRVFESIKFPAVDHYACMVDLLGRVGELDE 560

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AKRLID MPM PHAG+YGSLLNAS +H R++L EFAAN+L ELEP NSGNYVLLSNIYAS
Sbjct: 561  AKRLIDHMPMEPHAGIYGSLLNASTIHKRVELGEFAANKLFELEPSNSGNYVLLSNIYAS 620

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
            + RW DVD +R  M+K GVKKTTGWSWVEH GK+HKFIVGD SHE S  IYR+L E+  +
Sbjct: 621  AARWGDVDWVREAMRKLGVKKTTGWSWVEHDGKVHKFIVGDRSHERSDDIYRLLEELCRK 680

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            M   GY+A+KSCVLRDV       M+GTHSEKLA+ FA+LVSE  + +RV+KNLRVC+DC
Sbjct: 681  MGRLGYIANKSCVLRDVEDEEKEEMVGTHSEKLAVCFALLVSEVGAVVRVVKNLRVCQDC 740

Query: 901  HTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            HTA+K+IS LEGREII+RDNNRFH F DG CSC+D+W
Sbjct: 741  HTAMKMISMLEGREIIMRDNNRFHHFIDGQCSCRDYW 777



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 47/171 (27%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
 Frame = +1

Query: 10  SISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKM- 186
           S + +N++I  Y + G++  A+++F +M  R+V+S+NS+I GFA  G    ++ L  +M 
Sbjct: 342 SCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMI 401

Query: 187 KQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAP----DIDHYACMVDLYSRVGKL 354
              +++PD VT + +++ C   G++E G  V   I        I  Y  ++ +YS+ G +
Sbjct: 402 ATTNLKPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGSM 461

Query: 355 DEAKRLIDSMPMHPHAGVYGSLLNASRVHNR-IDLAEFAANRLLE-LEPEN 501
            +A+R+   M        Y +L++    H R I+  E  +    E +EP++
Sbjct: 462 KDAERIFQEMKRRDTIS-YNALVSGFGAHGRGIEAVELMSRMRKEGIEPDH 511


>ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Fragaria vesca subsp. vesca]
          Length = 764

 Score =  493 bits (1270), Expect = e-137
 Identities = 230/334 (68%), Positives = 281/334 (84%)
 Frame = +1

Query: 10   SISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMK 189
            SIS YNSLI +YSKCGSM  AK+IF E+  RDV+SYN+LI+GFAA+G G+E+V L+ KMK
Sbjct: 431  SISVYNSLISLYSKCGSMDDAKRIFDEIKNRDVVSYNALISGFAAHGHGMEAVKLMMKMK 490

Query: 190  QESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKR 369
            +E +EP+R TYIGILTACSH+G +EEG+K+FESI+ PD+DHYAC+VDL  RVGK+DEAK 
Sbjct: 491  EEFLEPNRETYIGILTACSHAGLLEEGQKIFESIKDPDVDHYACLVDLLGRVGKVDEAKN 550

Query: 370  LIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGR 549
            ++D M   PHAGVYGSLLNASR+H RIDLAEFAA+ L ELEP NSGNY+LLSN+YAS+GR
Sbjct: 551  IVDGMQKEPHAGVYGSLLNASRIHKRIDLAEFAASELFELEPHNSGNYILLSNMYASAGR 610

Query: 550  WEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKERMRN 729
            W+DV R+R  M+  GVKK TGWSWVE+ GK+HKFI GD SHE+S  IYR+L+E+  ++RN
Sbjct: 611  WDDVVRVREAMRNAGVKKATGWSWVEYNGKMHKFIAGDRSHEMSDEIYRLLAELGRKLRN 670

Query: 730  AGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDCHTA 909
            +GY+ADK+CVLRDV       M+GTHSEKLA+ FA+LV+EP S IRV+KNLRVCRDCHTA
Sbjct: 671  SGYIADKACVLRDVDEEEKEEMVGTHSEKLAVCFALLVTEPKSVIRVVKNLRVCRDCHTA 730

Query: 910  IKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            IK+IS LEGR+II+RDNNRFH F DG CSC D+W
Sbjct: 731  IKMISMLEGRKIILRDNNRFHHFSDGQCSCGDYW 764



 Score = 87.4 bits (215), Expect = 8e-15
 Identities = 68/264 (25%), Positives = 122/264 (46%), Gaps = 14/264 (5%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            +Y S   +N++I  Y++ G +  A+++F +M  RDVIS+NS+I+G+A  G    ++ L  
Sbjct: 326  VYKSSGTWNAMISAYARVGDLTSARELFDKMLERDVISWNSMISGYAQNGQSALAIDLFK 385

Query: 181  KM-KQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQA----PDIDHYACMVDLYSRV 345
             M    + +P+ VT   +++AC H G++E G      +      P I  Y  ++ LYS+ 
Sbjct: 386  DMTASNNPKPNEVTMASVISACGHLGALEIGNWAVNFLTKHHINPSISVYNSLISLYSKC 445

Query: 346  GKLDEAKRLIDSMPMHPHAGVYGSLLNASRVHNR-IDLAEFAANRLLELEPENSGNYVLL 522
            G +D+AKR+ D +        Y +L++    H   ++  +       E    N   Y+ +
Sbjct: 446  GSMDDAKRIFDEIKNRDVVS-YNALISGFAAHGHGMEAVKLMMKMKEEFLEPNRETYIGI 504

Query: 523  SNIYASSGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKF-----IVGDHSHELSIG 687
                + +G  E+  +I   +K   V        V+  G++ K      IV     E   G
Sbjct: 505  LTACSHAGLLEEGQKIFESIKDPDVDHYA--CLVDLLGRVGKVDEAKNIVDGMQKEPHAG 562

Query: 688  IYRVL---SEIKERMRNAGYVADK 750
            +Y  L   S I +R+  A + A +
Sbjct: 563  VYGSLLNASRIHKRIDLAEFAASE 586



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 47/201 (23%), Positives = 102/201 (50%), Gaps = 5/201 (2%)
 Frame = +1

Query: 25  NSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIE 204
           N+++ +YSK G +  A+K+F+EM  R ++ +N++++G+  +G  +E+  L   M     E
Sbjct: 139 NAVMSVYSKYGPVEHARKVFEEMPERSLVDWNNMVSGYWKWGDKVEACKLFDMMP----E 194

Query: 205 PDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKRLIDSM 384
            D V++  ++T  +    +E  ++ F+ +   ++  +  M+  Y++ G  +EA RL D M
Sbjct: 195 KDVVSWTAMVTGYARMKDLENARRCFDDVPEKNVVSWNAMLSAYAQNGCPEEALRLFDDM 254

Query: 385 ---PMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENS--GNYVLLSNIYASSGR 549
               + P+   +  +++A        + +    +L +     S  G   +L ++YA  G 
Sbjct: 255 MDSGVQPNETTWAVVISACSSCGDSSVVDSFIQKLNQKRMHLSYFGKTAML-DMYAKRG- 312

Query: 550 WEDVDRIRGLMKKEGVKKTTG 612
              ++R R +  + GV K++G
Sbjct: 313 --SIERAREVFDELGVYKSSG 331



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 25/143 (17%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
 Frame = +1

Query: 13  ISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQ 192
           +  + +++  Y++   +  A++ F ++  ++V+S+N++++ +A  G   E++ L   M  
Sbjct: 197 VVSWTAMVTGYARMKDLENARRCFDDVPEKNVVSWNAMLSAYAQNGCPEEALRLFDDMMD 256

Query: 193 ESIEPDRVTYIGILTACSHSGSIEEGKKVFESI--QAPDIDHY--ACMVDLYSRVGKLDE 360
             ++P+  T+  +++ACS  G         + +  +   + ++    M+D+Y++ G ++ 
Sbjct: 257 SGVQPNETTWAVVISACSSCGDSSVVDSFIQKLNQKRMHLSYFGKTAMLDMYAKRGSIER 316

Query: 361 AKRLIDSMPMHPHAGVYGSLLNA 429
           A+ + D + ++  +G + ++++A
Sbjct: 317 AREVFDELGVYKSSGTWNAMISA 339


>ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Cucumis sativus]
          Length = 759

 Score =  486 bits (1251), Expect = e-135
 Identities = 228/337 (67%), Positives = 278/337 (82%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I L ISG+NSLI+MYSKCGS+  A +IFQ MGTRDV+S+N+LI+GFAA G G E++ L+ 
Sbjct: 423  IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVL 482

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
             M++E IEPD VTYIG+LTACSH+G + EGK VF+SIQAP +DHYACMVDL  R G+LDE
Sbjct: 483  TMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYACMVDLLGRAGELDE 542

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AK LI SMPM PHAGVYGSLLNASR+H R+ L E AA++L ELEP+N GNYVLLSNIYAS
Sbjct: 543  AKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYAS 602

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
             GRWEDV R+R +MKK G+KK+ G SWVE+ G++HKF VGD SHE S  IY++L+E++ +
Sbjct: 603  FGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERK 662

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            M+  G+VADKSC LRDV       M+GTHSEKLAI FA+L+SE  +TIRV+KNLR+C DC
Sbjct: 663  MKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDC 722

Query: 901  HTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            HTAIK+IS+LEGREI+VRDNNRFHCF +GMCSC D+W
Sbjct: 723  HTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKM-KQES 198
           +N +I  Y++ G +  A+++F  M  RDV+S+NS+I G+A  G    S+ L  +M     
Sbjct: 328 WNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD 387

Query: 199 IEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPD----IDHYACMVDLYSRVGKLDEAK 366
           I+PD VT   +L+AC H G+++    V + ++  +    I  +  ++ +YS+ G + +A 
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447

Query: 367 RLIDSM 384
           R+  +M
Sbjct: 448 RIFQTM 453



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
 Frame = +1

Query: 10  SISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMK 189
           +I  + S++  Y+K G +  A++ F EM  R V+S+N++ + +A      E++ L  +M 
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250

Query: 190 QESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYA----CMVDLYSRVGKLD 357
           +E I PD  T++  +++CS  G       +   I    I   +     ++D++++ G L+
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310

Query: 358 EAKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLA 459
            A+ + D +    +A  +  +++A     ++ LA
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLA 344


>ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g14470-like
            [Cucumis sativus]
          Length = 759

 Score =  486 bits (1251), Expect = e-135
 Identities = 228/337 (67%), Positives = 278/337 (82%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I L ISG+NSLI+MYSKCGS+  A +IFQ MGTRDV+S+N+LI+GFAA G G E++ L+ 
Sbjct: 423  IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVL 482

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
             M++E IEPD VTYIG+LTACSH+G + EGK VF+SIQAP +DHYACMVDL  R G+LDE
Sbjct: 483  TMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYACMVDLLGRAGELDE 542

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AK LI SMPM PHAGVYGSLLNASR+H R+ L E AA++L ELEP+N GNYVLLSNIYAS
Sbjct: 543  AKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYAS 602

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
             GRWEDV R+R +MKK G+KK+ G SWVE+ G++HKF VGD SHE S  IY++L+E++ +
Sbjct: 603  FGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERK 662

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            M+  G+VADKSC LRDV       M+GTHSEKLAI FA+L+SE  +TIRV+KNLR+C DC
Sbjct: 663  MKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDC 722

Query: 901  HTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            HTAIK+IS+LEGREI+VRDNNRFHCF +GMCSC D+W
Sbjct: 723  HTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKM-KQES 198
           +N +I  Y++ G +  A+++F  M  RDV+S+NS+I G+A  G    S+ L  +M     
Sbjct: 328 WNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMD 387

Query: 199 IEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPD----IDHYACMVDLYSRVGKLDEAK 366
           I+PD VT   +L+AC H G+++    V + ++  +    I  +  ++ +YS+ G + +A 
Sbjct: 388 IQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAH 447

Query: 367 RLIDSM 384
           R+  +M
Sbjct: 448 RIFQTM 453



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
 Frame = +1

Query: 10  SISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMK 189
           +I  + S++  Y+K G +  A++ F EM  R V+S+N++ + +A      E++ L  +M 
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250

Query: 190 QESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYA----CMVDLYSRVGKLD 357
           +E I PD  T++  +++CS  G       +   I    I   +     ++D++++ G L+
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310

Query: 358 EAKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLA 459
            A+ + D +    +A  +  +++A     ++ LA
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLA 344


>gb|EOY26401.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
            cacao]
          Length = 833

 Score =  466 bits (1198), Expect = e-129
 Identities = 221/321 (68%), Positives = 268/321 (83%)
 Frame = +1

Query: 1    IYLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLS 180
            I LSISGYN+LI+MYSKCGSM  A++IFQEM  RD ISYN+L++GF A+G GIE+V L+S
Sbjct: 441  IKLSISGYNTLIFMYSKCGSMKDAERIFQEMKRRDTISYNALVSGFGAHGRGIEAVELMS 500

Query: 181  KMKQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDE 360
            +M++E IEPD +TYIG+LTACSH+  ++EG++VFESI+ P +DHYACMVDL  RVG+LDE
Sbjct: 501  RMRKEGIEPDHITYIGVLTACSHARLLKEGRRVFESIKFPAVDHYACMVDLLGRVGELDE 560

Query: 361  AKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYAS 540
            AKRLID MPM PHAG+YGSLLNAS +H R++L EFAAN+L ELEP NSGNYVLLSNIYAS
Sbjct: 561  AKRLIDHMPMEPHAGIYGSLLNASTIHKRVELGEFAANKLFELEPSNSGNYVLLSNIYAS 620

Query: 541  SGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKER 720
            + RW DVD +R  M+K GVKKTTGWSWVEH GK+HKFIVGD SHE S  IYR+L E+  +
Sbjct: 621  AARWGDVDWVREAMRKLGVKKTTGWSWVEHDGKVHKFIVGDRSHERSDDIYRLLEELCRK 680

Query: 721  MRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDC 900
            M   GY+A+KSCVLRDV       M+GTHSEKLA+ FA+LVSE  + +RV+KNLRVC+DC
Sbjct: 681  MGRLGYIANKSCVLRDVEDEEKEEMVGTHSEKLAVCFALLVSEVGAVVRVVKNLRVCQDC 740

Query: 901  HTAIKIISQLEGREIIVRDNN 963
            HTA+K+IS LEGREII+RDNN
Sbjct: 741  HTAMKMISMLEGREIIMRDNN 761



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 47/171 (27%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
 Frame = +1

Query: 10  SISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKM- 186
           S + +N++I  Y + G++  A+++F +M  R+V+S+NS+I GFA  G    ++ L  +M 
Sbjct: 342 SCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMI 401

Query: 187 KQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAP----DIDHYACMVDLYSRVGKL 354
              +++PD VT + +++ C   G++E G  V   I        I  Y  ++ +YS+ G +
Sbjct: 402 ATTNLKPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGSM 461

Query: 355 DEAKRLIDSMPMHPHAGVYGSLLNASRVHNR-IDLAEFAANRLLE-LEPEN 501
            +A+R+   M        Y +L++    H R I+  E  +    E +EP++
Sbjct: 462 KDAERIFQEMKRRDTIS-YNALVSGFGAHGRGIEAVELMSRMRKEGIEPDH 511


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  347 bits (891), Expect = 3e-93
 Identities = 166/340 (48%), Positives = 233/340 (68%), Gaps = 5/340 (1%)
 Frame = +1

Query: 7    LSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKM 186
            L +S  N L+ MY KCG +  A+++F ++   DV S+N++I+G A +G G E+V L  +M
Sbjct: 31   LDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQM 90

Query: 187  KQESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQ-----APDIDHYACMVDLYSRVGK 351
             Q  ++P+++T++ +L+ CSH+G ++EG+  F+S+      +P  +HY+CMVDL+ R G 
Sbjct: 91   LQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGC 150

Query: 352  LDEAKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNI 531
            LDEA   I+ MP+ P+A V+GSLL A RVH  I+LAE A  +L+EL PEN G YVLLSNI
Sbjct: 151  LDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNI 210

Query: 532  YASSGRWEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEI 711
            YA++GRW+D  ++R +MK   VKK  G SW+E   K+H FIVGD SH     IY  L  +
Sbjct: 211  YAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETL 270

Query: 712  KERMRNAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVC 891
              +M+ AGY+ + + VL DV       ++G HSEKLAIAF I+ + P +TIRV+KNLRVC
Sbjct: 271  TLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHSEKLAIAFGIISTPPGTTIRVVKNLRVC 330

Query: 892  RDCHTAIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
             DCHTA K IS++  REI++RD +RFH FKDG CSC D+W
Sbjct: 331  GDCHTATKFISRIVSREIVLRDTHRFHHFKDGQCSCGDYW 370


>tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  346 bits (888), Expect = 8e-93
 Identities = 169/334 (50%), Positives = 225/334 (67%), Gaps = 5/334 (1%)
 Frame = +1

Query: 25   NSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIE 204
            N+L+ MY KCGSM +A   F+EM  RDV+S+N++I G+A +G G E++ +   M++ S +
Sbjct: 491  NALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTK 550

Query: 205  PDRVTYIGILTACSHSGSIEEGKKVFESIQ-----APDIDHYACMVDLYSRVGKLDEAKR 369
            PD +T +G+L ACSHSG +E+G   F S+      A   +HY CM+DL  R G+LDEA  
Sbjct: 551  PDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVN 610

Query: 370  LIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGR 549
            L+  MP  P + ++G+LL ASR+H   +L   AA ++ ELEPEN+G YVLLSNIYASSG+
Sbjct: 611  LMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGK 670

Query: 550  WEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKERMRN 729
            W DVD++R +M + GVKK  G+SW+E   K+H F VGD  H     IY  L ++  RM+ 
Sbjct: 671  WRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKK 730

Query: 730  AGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDCHTA 909
            AGYV+    VL DV       M+  HSEKLA+A+ IL   P   IRV+KNLRVCRDCHTA
Sbjct: 731  AGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTA 790

Query: 910  IKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
             K IS +EGR II+RD+NRFH F+DG CSC D+W
Sbjct: 791  FKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 1/200 (0%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESI 201
           YN+L++      S+   + +F EM  +D +SYN +I+  A +G     V+L       + 
Sbjct: 172 YNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGL----VSLARHYFDLAP 227

Query: 202 EPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKRLIDS 381
           E D V++ G+L A   +G I+E +++F+S    D   +  ++  Y +  +++EA+++ + 
Sbjct: 228 EKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNK 287

Query: 382 MPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEP-ENSGNYVLLSNIYASSGRWED 558
           MP      V       S    R D+AE  A RL ++ P  +   +  + + YA +G  E+
Sbjct: 288 MPQR---DVVSWNTMVSGYARRGDMAE--ARRLFDVAPIRDVFTWTAIVSGYAQNGMLEE 342

Query: 559 VDRIRGLMKKEGVKKTTGWS 618
             R+   M     K    W+
Sbjct: 343 AKRVFDAMPD---KNAVSWN 359



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 46/199 (23%), Positives = 96/199 (48%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESI 201
           +N ++  Y + G + +A+++F      D IS+N+L+ G+       E+  + +KM Q  +
Sbjct: 234 WNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDV 293

Query: 202 EPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKRLIDS 381
               V++  +++  +  G + E +++F+     D+  +  +V  Y++ G L+EAKR+ D+
Sbjct: 294 ----VSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDA 349

Query: 382 MPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGRWEDV 561
           MP      V  + + A+ V  R  + E A      +   N  ++  +   YA +G  ++ 
Sbjct: 350 MP--DKNAVSWNAMMAAYVQRR--MMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEA 405

Query: 562 DRIRGLMKKEGVKKTTGWS 618
             I G+M +   K    W+
Sbjct: 406 RAIFGMMPQ---KDAVSWA 421



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 29/125 (23%), Positives = 69/125 (55%)
 Frame = +1

Query: 13  ISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQ 192
           +  +N+++  Y++ G M +A+++F     RDV ++ ++++G+A  G   E+  +   M  
Sbjct: 293 VVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMP- 351

Query: 193 ESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKRL 372
              + + V++  ++ A      +EE K++F+++   ++  +  M+  Y++ G LDEA+ +
Sbjct: 352 ---DKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAI 408

Query: 373 IDSMP 387
              MP
Sbjct: 409 FGMMP 413


>ref|XP_004956593.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Setaria italica]
          Length = 752

 Score =  340 bits (873), Expect = 4e-91
 Identities = 166/334 (49%), Positives = 222/334 (66%), Gaps = 5/334 (1%)
 Frame = +1

Query: 25   NSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIE 204
            N+L+ MY KCG+M +A   F+EM  RDV+S+N++I G+A +G G E++     M++ S +
Sbjct: 419  NALLAMYFKCGNMEEAHNAFEEMEERDVVSWNTMIAGYARHGFGKEALEFFDTMRKTSTK 478

Query: 205  PDRVTYIGILTACSHSGSIEEGKKVFESIQ-----APDIDHYACMVDLYSRVGKLDEAKR 369
            PD +T +G+L ACSHSG +E+G   F S+          +HY CM+DL  R G+LDEA  
Sbjct: 479  PDDITLVGVLAACSHSGLVEKGISYFYSMHHNFGVTAKPEHYTCMIDLLGRAGRLDEAVN 538

Query: 370  LIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGR 549
            L+  MP  P + ++G+LL ASR+H   +L   AA ++ ELEPEN+G YVLLSNIYASSG+
Sbjct: 539  LMKDMPFEPDSTMWGALLGASRIHRNSELGRSAAEKIFELEPENAGMYVLLSNIYASSGK 598

Query: 550  WEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKERMRN 729
            W DVD++R +M + GVKK  G+SW+E   K+H F VGD  H     IY  L ++  RM+ 
Sbjct: 599  WRDVDKMRLMMYERGVKKVPGFSWIEVQNKVHTFSVGDCVHSEKEDIYDFLEDLDMRMKK 658

Query: 730  AGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDCHTA 909
            AGYV+    VL DV       M+  HSEKLA+A+ IL   P   IRV+KNLRVC DCHTA
Sbjct: 659  AGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCEDCHTA 718

Query: 910  IKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
             K IS +EGR II+RD+NRFH F+DG CSC D+W
Sbjct: 719  FKYISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 752



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 1/200 (0%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESI 201
           YN+L++  +   S+  A+ +F+EM  +D +SYN +I+  A +G     V+L       + 
Sbjct: 100 YNTLLHALAVSSSLADARSLFEEMPVKDSVSYNVMISSHANHG----LVSLARHYFDLAP 155

Query: 202 EPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKRLIDS 381
           E D V++ G+L A   +G I+E + +F S    D   +  ++  Y + GK+ EA+ + + 
Sbjct: 156 EKDAVSWNGMLAAYVRNGRIQEARGLFNSRTEWDAISWNALMAGYVQWGKMAEAQEMFNR 215

Query: 382 MPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEP-ENSGNYVLLSNIYASSGRWED 558
           MP      V    +  S    R D+ E  A RL +  P  +   +  + + YA +G  E+
Sbjct: 216 MPQR---DVVSWNIMVSGYARRGDMME--ARRLFDAAPVRDVFTWTAVVSGYAQNGMLEE 270

Query: 559 VDRIRGLMKKEGVKKTTGWS 618
             R+   M +   K    W+
Sbjct: 271 ARRVFDAMPE---KNAVSWN 287



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 34/122 (27%), Positives = 69/122 (56%)
 Frame = +1

Query: 22  YNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESI 201
           +N+L+  Y + G M +A+++F  M  RDV+S+N +++G+A  G  +E+  L         
Sbjct: 193 WNALMAGYVQWGKMAEAQEMFNRMPQRDVVSWNIMVSGYARRGDMMEARRLFDAAPVR-- 250

Query: 202 EPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKRLIDS 381
             D  T+  +++  + +G +EE ++VF+++   +   +  M+  + +   +DEAK L D+
Sbjct: 251 --DVFTWTAVVSGYAQNGMLEEARRVFDAMPEKNAVSWNAMMAAFVQRKMMDEAKELFDA 308

Query: 382 MP 387
           MP
Sbjct: 309 MP 310


>ref|XP_002323645.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550321449|gb|EEF05406.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 682

 Score =  340 bits (872), Expect = 5e-91
 Identities = 166/333 (49%), Positives = 229/333 (68%), Gaps = 5/333 (1%)
 Frame = +1

Query: 28   SLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIEP 207
            +LI MY+KCG M +A ++F+ M  +D + +N+ I+G A  G   +++ L  +M++  I+P
Sbjct: 350  ALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKP 409

Query: 208  DRVTYIGILTACSHSGSIEEGKKVFESIQA-----PDIDHYACMVDLYSRVGKLDEAKRL 372
            DR T++G+L AC+H+G +EEG++ F S++      P+I+HY CMVDL  R G LDEA +L
Sbjct: 410  DRNTFVGLLCACTHAGLVEEGRRYFNSMECVYTLTPEIEHYGCMVDLLGRAGCLDEAHQL 469

Query: 373  IDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGRW 552
            I SMPM  +A V+G+LL   R+H    L E    +L+ LEP +SGNYVLLSNIYA+S +W
Sbjct: 470  IKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKW 529

Query: 553  EDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKERMRNA 732
            E+  +IR +M + GVKK  G+SW+E  G +H+F+VGD SH LS  IY  L E+ + ++ A
Sbjct: 530  EEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAA 589

Query: 733  GYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDCHTAI 912
            GYV     VL D+        IG HSEKLA+AF ++ + P   I V+KNLRVC DCH AI
Sbjct: 590  GYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAI 649

Query: 913  KIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            K IS++ GREIIVRDNNRFHCF DG+CSCKD+W
Sbjct: 650  KHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 36/123 (29%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
 Frame = +1

Query: 28  SLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIEP 207
           +L+  Y KCG+M +A+ +F  M  ++++S++S+I G+A+ G   E++ L  KM  E ++P
Sbjct: 249 ALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKP 308

Query: 208 DRVTYIGILTACSHSGSIEEGKKVFESIQAPD-IDHY---ACMVDLYSRVGKLDEAKRLI 375
           D    +G+L +C+  G++E G      I   + +D+      ++D+Y++ G++D A  + 
Sbjct: 309 DCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVF 368

Query: 376 DSM 384
             M
Sbjct: 369 RGM 371



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 32/123 (26%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
 Frame = +1

Query: 28  SLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIEP 207
           SLI +Y+KCG +  A K+F ++  ++  S+ + I+G+   G   E++ +  ++ +  + P
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207

Query: 208 DRVTYIGILTACSHSGSIEEGKKVFESI----QAPDIDHYACMVDLYSRVGKLDEAKRLI 375
           D  + + +L+AC  +G +  G+ + E I     A ++     +VD Y + G ++ A+ + 
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMARNVFVATALVDFYGKCGNMERARSVF 267

Query: 376 DSM 384
           D M
Sbjct: 268 DGM 270


>ref|XP_006290208.1| hypothetical protein CARUB_v10003899mg [Capsella rubella]
            gi|482558914|gb|EOA23106.1| hypothetical protein
            CARUB_v10003899mg [Capsella rubella]
          Length = 756

 Score =  340 bits (872), Expect = 5e-91
 Identities = 163/334 (48%), Positives = 226/334 (67%), Gaps = 5/334 (1%)
 Frame = +1

Query: 25   NSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIE 204
            N+L+ MY KCGS+ +A  +F+EM  +D++S+N+LI G++ +G G E++     MK+E ++
Sbjct: 423  NALLLMYCKCGSIEEANDLFKEMNGKDIVSWNTLIAGYSRHGFGEEALRFFESMKREGLK 482

Query: 205  PDRVTYIGILTACSHSGSIEEGKKVFESIQ-----APDIDHYACMVDLYSRVGKLDEAKR 369
            PD  T + +L+ACSH+G +++G++ F ++       P+  HYACMVDL  R G LDEA  
Sbjct: 483  PDDATLVAVLSACSHTGLVDKGRQYFYTMTQDYGVTPNSQHYACMVDLLGRAGLLDEAHN 542

Query: 370  LIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGR 549
            L+  MP  P A ++G+LL ASRVH   DLAE AA+++  +EPENSG YVLLSNIYASSGR
Sbjct: 543  LMKKMPFEPDAAIWGTLLGASRVHGNTDLAETAADKIFAMEPENSGMYVLLSNIYASSGR 602

Query: 550  WEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKERMRN 729
            W DV ++R  M+ +GVKK  G+SW+E   K H F V D  H     IY  L +++ R++ 
Sbjct: 603  WGDVGKLRVKMRDKGVKKVPGYSWIEIQNKTHTFSVADEFHPEKDKIYAFLEDLELRIKK 662

Query: 730  AGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDCHTA 909
            AGYV+  S VL DV       M+  HSE+LA+A+ I+       IRV+KNLRVC DCH A
Sbjct: 663  AGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMHVPSGRPIRVIKNLRVCEDCHNA 722

Query: 910  IKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            IK ++++ GR II+RDNNRFH FKDG CSC D+W
Sbjct: 723  IKYMAKITGRLIILRDNNRFHHFKDGSCSCGDYW 756



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 31/126 (24%), Positives = 67/126 (53%)
 Frame = +1

Query: 13  ISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQ 192
           +  +N++I  Y++ G + +A+++F E   +DV ++ ++++G+       E+  L   M  
Sbjct: 225 VVSWNTIITGYAQNGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDNMP- 283

Query: 193 ESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKRL 372
              E + V++  +L        +E  K++F+ +   ++  +  M+  +S+ GK+ EAK L
Sbjct: 284 ---ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGFSQCGKISEAKNL 340

Query: 373 IDSMPM 390
            D MPM
Sbjct: 341 FDKMPM 346


>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein At5g44230-like
            [Vitis vinifera]
          Length = 647

 Score =  340 bits (872), Expect = 5e-91
 Identities = 164/335 (48%), Positives = 232/335 (69%), Gaps = 6/335 (1%)
 Frame = +1

Query: 25   NSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIE 204
            ++LI MY+KCGS+  A K+F+ M  R+V SY+S+I GFA +G    ++ L  +M +  I+
Sbjct: 313  SALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIK 372

Query: 205  PDRVTYIGILTACSHSGSIEEGKKVFESIQ-----APDIDHYACMVDLYSRVGKLDEAKR 369
            P+RVT+IG+LTACSH+G +E+G+++F  ++     AP  DHYACMVDL  R G+L+EA  
Sbjct: 373  PNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALN 432

Query: 370  LIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGR 549
            L+  MPM+PH GV+G+LL A R+H   D+A+ AA+ L ELEP   GNY+LLSNIYAS+GR
Sbjct: 433  LVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGR 492

Query: 550  WEDVDRIRGLMKKEGVKKTTGWSWVE-HAGKIHKFIVGDHSHELSIGIYRVLSEIKERMR 726
            W+DV ++R LM+ +G+KK  G SWVE   G IH+F  GD SH  S  I + L ++ +R++
Sbjct: 493  WDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLK 552

Query: 727  NAGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDCHT 906
              GY  + S V  D+       ++ +HSEKLA+AF +L +    TIR++KNLR+C DCH+
Sbjct: 553  YLGYQPNLSSVAYDISDEEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHS 612

Query: 907  AIKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
             +   SQ+ GREI+VRDN RFH F+DG CSC + W
Sbjct: 613  VMCGASQITGREIVVRDNMRFHHFRDGRCSCGNFW 647



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 34/166 (20%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
 Frame = +1

Query: 13  ISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQ 192
           +  + SLI  Y+K G+M  A ++F  +  +D++++ +++TG+A      E++ +  +M+ 
Sbjct: 206 VISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQA 265

Query: 193 ESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQ------APDIDHYACMVDLYSRVGKL 354
             ++ D VT +G+++AC+  G+ +    V +  +        ++   + ++D+Y++ G +
Sbjct: 266 AGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSV 325

Query: 355 DEAKRLIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELE 492
           ++A ++ + M    +   Y S++    +H     A    + +L+ E
Sbjct: 326 EDAYKVFERME-ERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTE 370


>ref|XP_002309169.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222855145|gb|EEE92692.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 619

 Score =  340 bits (871), Expect = 7e-91
 Identities = 165/333 (49%), Positives = 225/333 (67%), Gaps = 5/333 (1%)
 Frame = +1

Query: 28   SLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIEP 207
            +LI MY+KCG M  A ++F+ M  +D++ +N+ I+G A  G    +  L  +M++  IEP
Sbjct: 287  ALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEP 346

Query: 208  DRVTYIGILTACSHSGSIEEGKKVFESIQ-----APDIDHYACMVDLYSRVGKLDEAKRL 372
            D  T++G+L AC+H+G ++EG++ F S++      P+I+HY CMVDL  R G LDEA +L
Sbjct: 347  DGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQL 406

Query: 373  IDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGRW 552
            + SMPM  +A V+G+LL   R+H    L E    +L+ LEP NSGNYVLLSNIY++S +W
Sbjct: 407  VKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKW 466

Query: 553  EDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKERMRNA 732
            ED  +IR +M + G+KK  G+SW+E  G +H+F+VGD SH LS  IY  L E+ + ++ +
Sbjct: 467  EDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKAS 526

Query: 733  GYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDCHTAI 912
            GYV     VL D+        IG HSEKLAIAF ++ + P   IRV+KNLRVC DCH AI
Sbjct: 527  GYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAI 586

Query: 913  KIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            K IS+  GREIIVRDNNRFHCF DG CSCKD+W
Sbjct: 587  KHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
 Frame = +1

Query: 13  ISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQ 192
           ISGY  +           +A  +F  M  +D++S++S+I G+A+ G   E++ L  KM  
Sbjct: 181 ISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLN 240

Query: 193 ESIEPDRVTYIGILTACSHSGSIEEGKKVF------ESIQAPDIDHYACMVDLYSRVGKL 354
           E   PD    +G+L AC+  G++E G          E +  P +     ++D+Y++ G++
Sbjct: 241 EGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLG--TALIDMYAKCGRM 298

Query: 355 DEAKRLIDSM 384
           D A  +   M
Sbjct: 299 DSAWEVFRGM 308


>ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297318652|gb|EFH49074.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 776

 Score =  338 bits (866), Expect = 3e-90
 Identities = 160/334 (47%), Positives = 227/334 (67%), Gaps = 5/334 (1%)
 Frame = +1

Query: 25   NSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIE 204
            N+L+ MY KCGS+ +A  +F+EM  +D++S+N++I G++ +G G E++     MK+E ++
Sbjct: 443  NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLK 502

Query: 205  PDRVTYIGILTACSHSGSIEEGKKVFESIQA-----PDIDHYACMVDLYSRVGKLDEAKR 369
            PD  T + +L+ACSH+G +++G++ F ++       P+  HYACMVDL  R G L+EA  
Sbjct: 503  PDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHN 562

Query: 370  LIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGR 549
            L+ +MP  P A ++G+LL ASRVH   +LAE AA+++  +EPENSG YVLLSN+YASSGR
Sbjct: 563  LMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGR 622

Query: 550  WEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKERMRN 729
            W DV ++R  M+ +GVKK  G+SW+E   K H F VGD  H     I+  L ++  RM+ 
Sbjct: 623  WGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKK 682

Query: 730  AGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDCHTA 909
            AGYV+  S VL DV       M+  HSE+LA+A+ I+       IRV+KNLRVC DCH A
Sbjct: 683  AGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNA 742

Query: 910  IKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            IK ++++ GR II+RDNNRFH FKDG CSC D+W
Sbjct: 743  IKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 30/125 (24%), Positives = 66/125 (52%)
 Frame = +1

Query: 13  ISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQ 192
           +  +N++I  Y++ G + +A+++F E    DV ++ ++++G+       E+  L  +M  
Sbjct: 245 VVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMP- 303

Query: 193 ESIEPDRVTYIGILTACSHSGSIEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKRL 372
              E + V++  +L        +E  K++F+ +   ++  +  M+  Y++ GK+ EAK L
Sbjct: 304 ---ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 360

Query: 373 IDSMP 387
            D MP
Sbjct: 361 FDKMP 365


>ref|XP_006393385.1| hypothetical protein EUTSA_v10011302mg [Eutrema salsugineum]
            gi|557089963|gb|ESQ30671.1| hypothetical protein
            EUTSA_v10011302mg [Eutrema salsugineum]
          Length = 650

 Score =  337 bits (865), Expect = 3e-90
 Identities = 161/334 (48%), Positives = 226/334 (67%), Gaps = 5/334 (1%)
 Frame = +1

Query: 25   NSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSKMKQESIE 204
            N+L+ MY KCGS+ +A  +F+EM  +D++S+N++I G++ +G G E++     MK+E ++
Sbjct: 317  NALLLMYCKCGSIEEAYDLFEEMTGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLK 376

Query: 205  PDRVTYIGILTACSHSGSIEEGKKVFESIQ-----APDIDHYACMVDLYSRVGKLDEAKR 369
            PD  T + +L+ACSH+G +++G++ F ++       P+  HYACMVDL  R G L+EA  
Sbjct: 377  PDDATLVAVLSACSHTGLVDKGRQYFYTMTQDFGVTPNSQHYACMVDLLGRAGFLEEAHN 436

Query: 370  LIDSMPMHPHAGVYGSLLNASRVHNRIDLAEFAANRLLELEPENSGNYVLLSNIYASSGR 549
            L+ +MP  P   ++G+LL ASRVH   +LAE AA+++  +EPENSG YVLLSN+YASSGR
Sbjct: 437  LMKNMPFEPDGAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGR 496

Query: 550  WEDVDRIRGLMKKEGVKKTTGWSWVEHAGKIHKFIVGDHSHELSIGIYRVLSEIKERMRN 729
            W DV ++R  M+ +GVKK  G+SW+E   K H F VGD  H     IY  L ++  RM+ 
Sbjct: 497  WGDVGKLRLKMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIYAFLEDLDLRMKK 556

Query: 730  AGYVADKSCVLRDVXXXXXXXMIGTHSEKLAIAFAILVSEPWSTIRVMKNLRVCRDCHTA 909
            AGYV+  S VL DV       M+  HSE+LA+A+ I+       IRVMKNLRVC DCH A
Sbjct: 557  AGYVSKTSVVLHDVEEEEKECMVRYHSERLAVAYGIMRVSSGKPIRVMKNLRVCEDCHNA 616

Query: 910  IKIISQLEGREIIVRDNNRFHCFKDGMCSCKDHW 1011
            IK ++++ GR II+RDNNRFH FKDG CSC D+W
Sbjct: 617  IKCMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 650



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 35/162 (21%)
 Frame = +1

Query: 4   YLSISGYNSLIYMYSKCGSMGQAKKIFQEMGTRDVISYNSLITGFAAYGSGIESVALLSK 183
           + ++S +N++I  Y++CG + +AKK+F +M  RD +S+ ++I G++  G G E++ L  +
Sbjct: 209 FRNVSTWNTMITGYAQCGDVSEAKKLFDKMPKRDPVSWAAMIAGYSQCGHGYEALRLFVQ 268

Query: 184 MKQESIEPDRVTYIGILTACS-----------------------------------HSGS 258
           M++E    +R ++   L+ C+                                     GS
Sbjct: 269 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 328

Query: 259 IEEGKKVFESIQAPDIDHYACMVDLYSRVGKLDEAKRLIDSM 384
           IEE   +FE +   DI  +  M+  YSR G  +EA R  +SM
Sbjct: 329 IEEAYDLFEEMTGKDIVSWNTMIAGYSRHGFGEEALRFFESM 370