BLASTX nr result

ID: Rauwolfia21_contig00030009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00030009
         (305 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]    99   4e-19
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]    99   6e-19
emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]    99   6e-19
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]    99   6e-19
emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]    96   4e-18
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]    93   3e-17
emb|CAN77626.1| hypothetical protein VITISV_029420 [Vitis vinifera]    93   3e-17
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...    93   3e-17
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]    91   1e-16
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    91   2e-16
ref|XP_004516485.1| PREDICTED: uncharacterized protein LOC101509...    89   5e-16
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...    88   1e-15
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...    87   2e-15
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    86   4e-15
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...    86   4e-15
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    86   5e-15
emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera]    86   5e-15
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    85   9e-15
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]                85   1e-14
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]    85   1e-14

>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
          Length = 1322

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 49/99 (49%), Positives = 65/99 (65%)
 Frame = +3

Query: 6   LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
           +RVFGCLAYA TN H   KF PR+++C+FLG+P G K Y L DL T ++F SRDV+FHE 
Sbjct: 644 IRVFGCLAYA-TNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHET 702

Query: 186 TFPYSRLPSGNSSVEHGLPLPLITLDNPLSDFSHQSPHS 302
            FPY  +PS +S+ +  +PL +  L  P+   S   P S
Sbjct: 703 IFPYESIPSPSSNSDPVIPLSISDLSPPVQQPSPPEPIS 741


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/99 (49%), Positives = 65/99 (65%)
 Frame = +3

Query: 6   LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
           +RVFGCLAYA TN H   KF PR+++C+FLG+P G K Y L DL T ++F SRDV+FHE 
Sbjct: 621 IRVFGCLAYA-TNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHET 679

Query: 186 TFPYSRLPSGNSSVEHGLPLPLITLDNPLSDFSHQSPHS 302
            FPY  +PS +S+ +  +PL +  L  P+   S   P S
Sbjct: 680 IFPYESIPSPSSNSDPVIPLSISDLSPPVPQPSPPEPIS 718


>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
          Length = 1236

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/99 (49%), Positives = 65/99 (65%)
 Frame = +3

Query: 6    LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
            +RVFGCLAYA TN H   KF PR+++C+FLG+P G K Y L DL T ++F SRDV+FHE 
Sbjct: 719  IRVFGCLAYA-TNVHIPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHET 777

Query: 186  TFPYSRLPSGNSSVEHGLPLPLITLDNPLSDFSHQSPHS 302
             FPY  +PS +S+ +  +PL +  L  P+   S   P S
Sbjct: 778  IFPYESIPSPSSNSDPVIPLSISDLSPPVQQPSPPEPIS 816


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/99 (49%), Positives = 65/99 (65%)
 Frame = +3

Query: 6    LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
            +RVFGCLAYA TN H   KF PR+++C+FLG+P G K Y L DL T ++F SRDV+FHE 
Sbjct: 736  IRVFGCLAYA-TNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHET 794

Query: 186  TFPYSRLPSGNSSVEHGLPLPLITLDNPLSDFSHQSPHS 302
             FPY  +PS +S+ +  +PL +  L  P+   S   P S
Sbjct: 795  IFPYESIPSPSSNSDPVIPLSISDLSPPVPQPSPPEPIS 833


>emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]
          Length = 1114

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/99 (48%), Positives = 64/99 (64%)
 Frame = +3

Query: 6   LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
           +RVFGCLAYA TN H   KF PR+++C+FLG+P   K Y L DL T ++F SRDV+FHE 
Sbjct: 615 IRVFGCLAYA-TNVHVPHKFAPRAKRCIFLGYPVXQKAYKLYDLDTHQMFTSRDVVFHET 673

Query: 186 TFPYSRLPSGNSSVEHGLPLPLITLDNPLSDFSHQSPHS 302
            FPY  +PS +S+ +  +PL +  L  P+   S   P S
Sbjct: 674 IFPYESIPSPSSNSDPVIPLSISDLSPPVXQPSPPEPIS 712


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 50/95 (52%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
 Frame = +3

Query: 6   LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
           LRVFGCL Y  T    RTKF PR++  VFLG+P G KGY LLD+ TR I ISR+VIFHE 
Sbjct: 576 LRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSISISRNVIFHEE 635

Query: 186 TFPYSRL-----PSGNSSVEHGLPLPLITLDNPLS 275
            FP+S+      P  +S + H   LP I  DN  S
Sbjct: 636 IFPFSKTNPCSSPDISSDLFHDRVLPCIAADNDQS 670


>emb|CAN77626.1| hypothetical protein VITISV_029420 [Vitis vinifera]
          Length = 1016

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 47/99 (47%), Positives = 63/99 (63%)
 Frame = +3

Query: 6   LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
           +RVFGCLAYA TN H   KF PR+++C+FLG+P G K Y L DL T ++F SRDV+FHE 
Sbjct: 521 IRVFGCLAYA-TNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHET 579

Query: 186 TFPYSRLPSGNSSVEHGLPLPLITLDNPLSDFSHQSPHS 302
            FP   +PS +S+ +  + L +  L  P+   S   P S
Sbjct: 580 IFPXESIPSPSSNSDXVIXLSISBLSPPVPQPSPPEPIS 618


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 46/99 (46%), Positives = 65/99 (65%)
 Frame = +3

Query: 6    LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
            LR FGCL Y+ T+   R KF+PRSR C+FLG+PSG KGY L+DL +  +FISR+V FHE 
Sbjct: 778  LRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEE 837

Query: 186  TFPYSRLPSGNSSVEHGLPLPLITLDNPLSDFSHQSPHS 302
             FP ++ P   SS++  L  P++ + + +   +  SP S
Sbjct: 838  VFPLAKNPGSESSLK--LFTPMVPVSSGIISDTTHSPSS 874


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 42/73 (57%), Positives = 54/73 (73%)
 Frame = +3

Query: 6   LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
           +RVFGCLAYA TN H   KF PR+++C+FLG+P G K Y L DL T ++F SRDV+FHE 
Sbjct: 472 IRVFGCLAYA-TNVHVPHKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQMFTSRDVVFHET 530

Query: 186 TFPYSRLPSGNSS 224
            FPY  +PS +S+
Sbjct: 531 IFPYESIPSPSSN 543


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
          Length = 1131

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 49/100 (49%), Positives = 62/100 (62%)
 Frame = +3

Query: 6    LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
            LR FGCL Y  T+   R KF PRSR CVFLG+PSG KGY LLDL + +I+ISR+V FHE 
Sbjct: 738  LRTFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKIYISRNVTFHED 797

Query: 186  TFPYSRLPSGNSSVEHGLPLPLITLDNPLSDFSHQSPHSS 305
             FP ++    + S  H  P P +T+ +  S     SP S+
Sbjct: 798  IFPMAKHQKMDESSLHFFP-PKVTVPSAPSPNISSSPFST 836


>ref|XP_004516485.1| PREDICTED: uncharacterized protein LOC101509602 [Cicer arietinum]
          Length = 579

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 11/110 (10%)
 Frame = +3

Query: 6   LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
           +RVFGCL YA T    R KF+PRSR+C++LG   G KGY+L DL  REIF+SRD+ F E 
Sbjct: 355 IRVFGCLCYASTLKSNRKKFDPRSRKCIYLGHKFGTKGYILFDLHNREIFVSRDIAFFEN 414

Query: 186 TFPY---------SRLPSGN-SSVEHGLPLPLITLDNPLS-DFSHQSPHS 302
            FP+         S +P  N +S++    LP   ++N L+  FS Q P S
Sbjct: 415 VFPFNGSQENKISSSIPFINPTSIDFLFDLPPTPIENALAPSFSPQLPFS 464


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
            gi|7268152|emb|CAB78488.1| retrovirus-related like
            polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/89 (48%), Positives = 58/89 (65%)
 Frame = +3

Query: 6    LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
            L+ FGCL +  TNAH RTKF PR+R CVFLG+PSG KGY +LDL +  + +SR+V+F E 
Sbjct: 797  LKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSVTVSRNVVFKEH 856

Query: 186  TFPYSRLPSGNSSVEHGLPLPLITLDNPL 272
             FP+      N +V+   P  ++ L  PL
Sbjct: 857  VFPFKTSELLNKAVDM-FPNSILPLPAPL 884


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 6/88 (6%)
 Frame = +3

Query: 6   LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
           ++ FGCLAYA T +  R+KF+PR++ CVF+GFP G KGY L D+A R+ FISRDV+F E 
Sbjct: 591 IKTFGCLAYASTPSVNRSKFDPRAQPCVFMGFPPGIKGYRLYDIAKRKFFISRDVLFFEE 650

Query: 186 TFPYSRLPSGNSSVEHG------LPLPL 251
            FP+  +   +  + H       +P PL
Sbjct: 651 LFPFHSIKEKDIPISHDFLEQFVIPCPL 678


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 14/114 (12%)
 Frame = +3

Query: 6    LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
            LRVFGC  Y  TN H + KF+PR+  CVFLG+P G KGY +LDL T++I +SRDV F E 
Sbjct: 989  LRVFGCECYV-TNVHPKQKFDPRASICVFLGYPHGKKGYKVLDLQTQKISVSRDVFFREN 1047

Query: 186  TFPYSRLPSGNSSVEHGLPLPL-ITLDN---PLS----------DFSHQSPHSS 305
             FP+    S +      LPLPL I+ D+   P+S            SH +P SS
Sbjct: 1048 IFPFHSSSSQSQQHSPSLPLPLPISFDSTPQPISLPRFSPSSTPPLSHHNPVSS 1101


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 40/66 (60%), Positives = 48/66 (72%)
 Frame = +3

Query: 3    SLRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHE 182
            SL+VFGCL Y  T+   R KF PR+R CVFLG+PSG KGY LLDL T  I ISR V+F+E
Sbjct: 805  SLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIHISRHVVFYE 864

Query: 183  LTFPYS 200
              FP++
Sbjct: 865  TVFPFT 870


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 47/97 (48%), Positives = 59/97 (60%)
 Frame = +3

Query: 6    LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
            L+ FGCL YA T+   R KFE R+R C FLG+PSG KGY LLDL +  IFISR+V+F+E 
Sbjct: 754  LKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYED 813

Query: 186  TFPYSRLPSGNSSVEHGLPLPLITLDNPLSDFSHQSP 296
             FP+   P+ N   E  +  P I +D   S  S   P
Sbjct: 814  LFPFKTKPAENE--ESSVFFPHIYVDRNDSHPSQPLP 848


>emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera]
          Length = 746

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
 Frame = +3

Query: 9   RVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHELT 188
           R FGCLA+A T    RTKF+PRSR CV LG+P G KGY L D+ T++IFIS+D IFHE  
Sbjct: 248 REFGCLAFASTLTAHRTKFQPRSRVCVLLGYPPGIKGYRLYDVVTKQIFISQDAIFHEEI 307

Query: 189 FPYSRLPSGNSSVE--HGLPLPLITLD-NPLS 275
           FP+      +  ++    L LP+ +L+ +P+S
Sbjct: 308 FPFHTATPLDKLIDPFPNLVLPISSLEPSPIS 339


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 42/84 (50%), Positives = 53/84 (63%)
 Frame = +3

Query: 21  CLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHELTFPYS 200
           CL YA TN H R KF PR+R CVFLG+PSG KGY +LDL +  I I+R+V+FHE  FP+ 
Sbjct: 723 CLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSISITRNVVFHETKFPFK 782

Query: 201 RLPSGNSSVEHGLPLPLITLDNPL 272
                  SV+   P  ++ L  PL
Sbjct: 783 TSKFLKESVDM-FPNSILPLPAPL 805


>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
          Length = 1436

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
 Frame = +3

Query: 3    SLRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHE 182
            SL+ FGCL Y  T+   RTKF+PR++ C+FLG+P G KGY LLD+ T  + ISR VIF+E
Sbjct: 778  SLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISRHVIFYE 837

Query: 183  LTFPYSRLPSGNSSVEH----GLPLPLITLDNPLSDFSHQSPHS 302
              FP++     +++ +      LP P      PL   S  +PH+
Sbjct: 838  DIFPFASSNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPHN 881


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
 Frame = +3

Query: 6    LRVFGCLAYACTNAHGRTKFEPRSRQCVFLGFPSGCKGYVLLDLATREIFISRDVIFHEL 185
            LRVFGCLAYA TN H   KF+ R+  C+F+G+P G K Y L +L+TR+IF SRDV FHE 
Sbjct: 767  LRVFGCLAYA-TNVHVSHKFDHRAIACIFIGYPVGQKAYKLFNLSTRKIFTSRDVRFHEN 825

Query: 186  TFPY----SRLPSGNSSVEHG-LPLPL 251
             FPY    S LP+ N     G +P+P+
Sbjct: 826  RFPYASFESVLPTSNLGYSSGPIPVPI 852


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