BLASTX nr result

ID: Rauwolfia21_contig00029450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00029450
         (243 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...    73   3e-11
emb|CBI15364.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_006440833.1| hypothetical protein CICLE_v10018495mg [Citr...    58   1e-06
ref|XP_006485722.1| PREDICTED: WD repeat and HMG-box DNA-binding...    57   2e-06
gb|EMJ12204.1| hypothetical protein PRUPE_ppa020587mg [Prunus pe...    57   3e-06
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...    56   4e-06
ref|XP_002317959.2| hypothetical protein POPTR_0012s06670g [Popu...    56   6e-06
gb|EOY22186.1| Transducin family protein / WD-40 repeat family p...    56   6e-06
gb|EOY22185.1| Transducin family protein / WD-40 repeat family p...    56   6e-06

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 42/78 (53%), Positives = 51/78 (65%)
 Frame = +2

Query: 2   EEEPCPSGSLSDLGEDSFAESEPPSRKRLRKQSIXXXXXXXXXXXXXVPKVEPSKRVSNI 181
           E+EP  SGSLSDLGEDS  ESEPPSRKRLRKQS              +PKVE  K+ S+ 
Sbjct: 338 EQEPSASGSLSDLGEDSHGESEPPSRKRLRKQS-TYDEDINDDLLSSLPKVESRKKASHS 396

Query: 182 KKEKHTIDHGKDGLKGTT 235
            KE  ++++G +GLK TT
Sbjct: 397 HKE--SLNNGNEGLKSTT 412


>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 42/78 (53%), Positives = 51/78 (65%)
 Frame = +2

Query: 2   EEEPCPSGSLSDLGEDSFAESEPPSRKRLRKQSIXXXXXXXXXXXXXVPKVEPSKRVSNI 181
           E+EP  SGSLSDLGEDS  ESEPPSRKRLRKQS              +PKVE  K+ S+ 
Sbjct: 299 EQEPSASGSLSDLGEDSHGESEPPSRKRLRKQS-TYDEDINDDLLSSLPKVESRKKASHS 357

Query: 182 KKEKHTIDHGKDGLKGTT 235
            KE  ++++G +GLK TT
Sbjct: 358 HKE--SLNNGNEGLKSTT 373


>ref|XP_006440833.1| hypothetical protein CICLE_v10018495mg [Citrus clementina]
           gi|557543095|gb|ESR54073.1| hypothetical protein
           CICLE_v10018495mg [Citrus clementina]
          Length = 1434

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
 Frame = +2

Query: 2   EEEPCPSGSLSDLGEDSFAESEPPSRKRLRKQSI--XXXXXXXXXXXXXVPKVEPSKRVS 175
           E+EP  SGSLSDLGEDS  ESE PSRKRLRKQ++                PK E  K+  
Sbjct: 337 EQEPSTSGSLSDLGEDSHGESEMPSRKRLRKQTVFDEDLDEEVNDELNLFPKTESRKKAH 396

Query: 176 NIKKEKHTIDHGKDGLKGTT 235
           +  KE     +G   ++ +T
Sbjct: 397 STHKEYSDKGNGSRSMRTST 416


>ref|XP_006485722.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Citrus
           sinensis]
          Length = 961

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
 Frame = +2

Query: 2   EEEPCPSGSLSDLGEDSFAESEPPSRKRLRKQSI--XXXXXXXXXXXXXVPKVEPSKRVS 175
           E+EP  SGSLSDLGEDS  ESE PSRKRLRKQ++                PK E  K+  
Sbjct: 337 EKEPSTSGSLSDLGEDSHGESEMPSRKRLRKQTVFDEDLDEEVNDELNLFPKTESRKKAH 396

Query: 176 NIKKEKHTIDHGKDGLKGTT 235
           +  KE     +G   ++ +T
Sbjct: 397 STHKEYSDKGNGSRSMRTST 416


>gb|EMJ12204.1| hypothetical protein PRUPE_ppa020587mg [Prunus persica]
          Length = 965

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/75 (46%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = +2

Query: 5   EEPCPSGSLSDLGEDSFAESEPPSRKRLRKQSI--XXXXXXXXXXXXXVPKVEPSKRVSN 178
           EE   SGSLSDLGEDS  ESEPPSRKRL K S                +PKVE  K+   
Sbjct: 343 EELSTSGSLSDLGEDSHGESEPPSRKRLHKHSAYDNDLEEDGFDDLSLLPKVESHKKAR- 401

Query: 179 IKKEKHTIDHGKDGL 223
            +K   + D+GK+G+
Sbjct: 402 -RKHGESADNGKEGV 415


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 775

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = +2

Query: 2   EEEPCPSGSLSDLGEDSFAESEPPSRKRLRKQSIXXXXXXXXXXXXXV---PKVEPSKRV 172
           ++EP  SGSLSDLGE     SEPPSRKRLRK S              +   PK+EP K+V
Sbjct: 341 DDEPSISGSLSDLGE-----SEPPSRKRLRKHSEFDEEGAREHINDELNLFPKIEPRKKV 395

Query: 173 SNIKKEKHTIDHGKDGLKGTTFS 241
             + K+   +D G +GL+ T  S
Sbjct: 396 HRVGKD--NMDKGNEGLRSTATS 416


>ref|XP_002317959.2| hypothetical protein POPTR_0012s06670g [Populus trichocarpa]
           gi|550326518|gb|EEE96179.2| hypothetical protein
           POPTR_0012s06670g [Populus trichocarpa]
          Length = 968

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   EEEPCPSGSLSDLGEDSFAESEPPSRKRLRKQS-IXXXXXXXXXXXXXVPKVEPSKRVSN 178
           + EP  SG LS+ GEDS  ESEP SRKRLRKQS               +PK EP K+V  
Sbjct: 340 DPEPSISGGLSEFGEDSLGESEPCSRKRLRKQSEFEDPDEDIDDELSLLPKTEPRKKVHR 399

Query: 179 IKKEKHTIDHGKDGLKGTTFS 241
             K+   +D G +GL+ T  S
Sbjct: 400 ASKD--NLDKG-NGLRSTVTS 417


>gb|EOY22186.1| Transducin family protein / WD-40 repeat family protein isoform 2
           [Theobroma cacao]
          Length = 951

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   EEEPCPSGSLSDLGEDSFAESEPPSRKRLRKQSI--XXXXXXXXXXXXXVPKVEPSKRVS 175
           ++E   SGSLSDLGEDS  ESEPPSRKRLRKQS+                 K E  K+V 
Sbjct: 341 DQELSMSGSLSDLGEDSHGESEPPSRKRLRKQSVIDDDQHEDVYNELNLCTKTEYRKKVH 400

Query: 176 NIKKEKHTIDHGKDG 220
            I KE  + D  +DG
Sbjct: 401 RINKE--SSDKERDG 413


>gb|EOY22185.1| Transducin family protein / WD-40 repeat family protein isoform 1
           [Theobroma cacao]
          Length = 988

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   EEEPCPSGSLSDLGEDSFAESEPPSRKRLRKQSI--XXXXXXXXXXXXXVPKVEPSKRVS 175
           ++E   SGSLSDLGEDS  ESEPPSRKRLRKQS+                 K E  K+V 
Sbjct: 341 DQELSMSGSLSDLGEDSHGESEPPSRKRLRKQSVIDDDQHEDVYNELNLCTKTEYRKKVH 400

Query: 176 NIKKEKHTIDHGKDG 220
            I KE  + D  +DG
Sbjct: 401 RINKE--SSDKERDG 413


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