BLASTX nr result
ID: Rauwolfia21_contig00029226
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00029226
(940 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW04309.1| ribosomal protein L20 [Secamone afzelii] 112 2e-22
ref|YP_008081288.1| ribosomal protein L20 (chloroplast) [Cathara... 111 5e-22
gb|ADD30301.1| ribosomal protein L20 [Nerium oleander] 111 5e-22
gb|AGW04920.1| ribosomal protein L20 [Telosma cordata] 110 6e-22
gb|ADD30297.1| ribosomal protein L20 [Ilex cornuta] 110 1e-21
ref|YP_003359382.1| ribosomal protein L20 (chloroplast) [Olea eu... 110 1e-21
gb|AGW04612.1| ribosomal protein L20 [Marsdenia astephanoides] 109 1e-21
gb|ADD30296.1| ribosomal protein L20 [Ehretia acuminata] 109 1e-21
gb|ADD30294.1| ribosomal protein L20 [Aucuba japonica] 108 2e-21
ref|YP_004564027.1| ribosomal protein L20 [Olea woodiana subsp. ... 108 2e-21
ref|YP_008593134.1| 50S ribosomal protein L20 (chloroplast) [Cam... 108 3e-21
ref|YP_007317271.1| ribosomal protein L20 (chloroplast) [Camelli... 108 3e-21
gb|AEC14311.1| ribosomal protein L20 [Franklinia alatamaha] 108 3e-21
gb|ADM92728.1| ribosomal protein L2 [Franklinia alatamaha] 108 3e-21
gb|AFV61836.1| ribosomal protein L20 (chloroplast) [Origanum vul... 107 5e-21
ref|YP_007353938.1| ribosomal protein L20 (chloroplast) [Tectona... 107 5e-21
ref|YP_008815960.1| ribosomal protein L20 (chloroplast) [Lindenb... 107 7e-21
ref|YP_009002278.1| ribosomal protein L20 (chloroplast) [Pinguic... 106 1e-20
ref|NP_054524.1| ribosomal protein L20 [Nicotiana tabacum] gi|28... 106 1e-20
gb|AGJ51276.1| ribosomal protein L20 (chloroplast) [Solanum caro... 106 1e-20
>gb|AGW04309.1| ribosomal protein L20 [Secamone afzelii]
Length = 130
Score = 112 bits (280), Expect = 2e-22
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLW TRINAVIRERGVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWTTRINAVIRERGVSY 76
>ref|YP_008081288.1| ribosomal protein L20 (chloroplast) [Catharanthus roseus]
gi|474452099|gb|AGI51167.1| ribosomal protein L20
(chloroplast) [Catharanthus roseus]
Length = 128
Score = 111 bits (277), Expect = 5e-22
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRER VS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERRVSY 76
>gb|ADD30301.1| ribosomal protein L20 [Nerium oleander]
Length = 128
Score = 111 bits (277), Expect = 5e-22
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRE GVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIREIGVSY 76
>gb|AGW04920.1| ribosomal protein L20 [Telosma cordata]
Length = 128
Score = 110 bits (276), Expect = 6e-22
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHS+LTRTITQQKIRAL SAHRDRGSQKRNFRRLWITRINAVIRE GVSH
Sbjct: 19 LFASSFRGAHSKLTRTITQQKIRALFSAHRDRGSQKRNFRRLWITRINAVIREGGVSH 76
>gb|ADD30297.1| ribosomal protein L20 [Ilex cornuta]
Length = 128
Score = 110 bits (274), Expect = 1e-21
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRERGVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRNRQKRNFRRLWITRINAVIRERGVSY 76
>ref|YP_003359382.1| ribosomal protein L20 (chloroplast) [Olea europaea]
gi|330850766|ref|YP_004376444.1| ribosomal protein L20
[Olea europaea subsp. europaea]
gi|334700305|ref|YP_004563804.1| ribosomal protein L20
[Olea europaea subsp. cuspidata]
gi|334701911|ref|YP_004564520.1| ribosomal protein L20
[Olea europaea subsp. maroccana]
gi|110456627|gb|ABG74754.1| ribosomal protein L20
[Forsythia europaea] gi|281428710|gb|ADA69949.1|
ribosomal protein L20 (chloroplast) [Olea europaea]
gi|291059276|gb|ADD72112.1| ribosomal protein L20 [Olea
europaea] gi|328795456|emb|CBR30338.1| ribosomal protein
L20 [Olea europaea subsp. europaea]
gi|334084424|emb|CBR23853.1| ribosomal protein L20 [Olea
europaea subsp. cuspidata] gi|334084510|emb|CBR24646.1|
ribosomal protein L20 [Olea europaea subsp. europaea]
gi|334084596|emb|CBR30430.1| ribosomal protein L20 [Olea
europaea subsp. europaea] gi|334084887|emb|CBS29265.1|
ribosomal protein L20 [Olea europaea subsp. maroccana]
gi|334084973|emb|CBJ04321.1| ribosomal protein L20 [Olea
europaea subsp. cuspidata] gi|334085059|emb|CBR23762.1|
ribosomal protein L20 [Olea europaea subsp. cuspidata]
gi|510934427|emb|CCQ09125.1| ribosomal protein L20
(chloroplast) [Olea europaea subsp. europaea]
Length = 128
Score = 110 bits (274), Expect = 1e-21
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRERGVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRRLWITRINAVIRERGVSY 76
>gb|AGW04612.1| ribosomal protein L20 [Marsdenia astephanoides]
Length = 128
Score = 109 bits (273), Expect = 1e-21
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQK RAL SAHRDRGSQKRNFRRLWITRINAVIRERGVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKKRALFSAHRDRGSQKRNFRRLWITRINAVIRERGVSY 76
>gb|ADD30296.1| ribosomal protein L20 [Ehretia acuminata]
Length = 128
Score = 109 bits (273), Expect = 1e-21
Identities = 55/58 (94%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRERGVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKRNFRRLWITRINAVIRERGVSY 76
>gb|ADD30294.1| ribosomal protein L20 [Aucuba japonica]
Length = 131
Score = 108 bits (271), Expect = 2e-21
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTI+QQKIRALVSAHRDR QKRNFRRLWITRINAVIRERGVS+
Sbjct: 19 LFASSFRGAHSRLTRTISQQKIRALVSAHRDRNKQKRNFRRLWITRINAVIRERGVSY 76
>ref|YP_004564027.1| ribosomal protein L20 [Olea woodiana subsp. woodiana]
gi|110456698|gb|ABG74807.1| ribosomal protein L20
[Jasminum abyssinicum] gi|334084682|emb|CBS29375.1|
ribosomal protein L20 [Olea woodiana subsp. woodiana]
Length = 128
Score = 108 bits (271), Expect = 2e-21
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRE+GVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRRLWITRINAVIREKGVSY 76
>ref|YP_008593134.1| 50S ribosomal protein L20 (chloroplast) [Camellia yunnanensis]
gi|537362904|gb|AGU44707.1| 50S ribosomal protein L20
(chloroplast) [Camellia yunnanensis]
Length = 117
Score = 108 bits (270), Expect = 3e-21
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRE+GVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKRNFRRLWITRINAVIREKGVSY 76
>ref|YP_007317271.1| ribosomal protein L20 (chloroplast) [Camellia sinensis]
gi|542688164|ref|YP_008520162.1| 50S ribosomal protein
L20 (chloroplast) [Camellia taliensis]
gi|552539638|ref|YP_008592780.1| 50S ribosomal protein
L20 (chloroplast) [Camellia cuspidata]
gi|552540887|ref|YP_008592867.1| 50S ribosomal protein
L20 (chloroplast) [Camellia danzaiensis]
gi|552540980|ref|YP_008592956.1| 50S ribosomal protein
L20 (chloroplast) [Camellia impressinervis]
gi|552546233|ref|YP_008593045.1| 50S ribosomal protein
L20 (chloroplast) [Camellia pitardii]
gi|388893230|gb|AFK81322.1| ribosomal protein L20
[Camellia sinensis var. assamica]
gi|388893406|gb|AFK81496.1| ribosomal protein L20
[Camellia taliensis] gi|430728295|gb|AGA55619.1|
ribosomal protein L20 (chloroplast) [Camellia sinensis]
gi|537362456|gb|AGU44264.1| 50S ribosomal protein L20
(chloroplast) [Camellia cuspidata]
gi|537362546|gb|AGU44353.1| 50S ribosomal protein L20
(chloroplast) [Camellia danzaiensis]
gi|537362634|gb|AGU44440.1| 50S ribosomal protein L20
(chloroplast) [Camellia impressinervis]
gi|537362724|gb|AGU44529.1| 50S ribosomal protein L20
(chloroplast) [Camellia taliensis]
gi|537362814|gb|AGU44618.1| 50S ribosomal protein L20
(chloroplast) [Camellia pitardii]
gi|537362994|gb|AGU44796.1| 50S ribosomal protein L20
(chloroplast) [Camellia taliensis]
Length = 117
Score = 108 bits (270), Expect = 3e-21
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRE+GVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKRNFRRLWITRINAVIREKGVSY 76
>gb|AEC14311.1| ribosomal protein L20 [Franklinia alatamaha]
Length = 117
Score = 108 bits (270), Expect = 3e-21
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRE+GVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKRNFRRLWITRINAVIREKGVSY 76
>gb|ADM92728.1| ribosomal protein L2 [Franklinia alatamaha]
Length = 392
Score = 108 bits (270), Expect = 3e-21
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRE+GVS+
Sbjct: 294 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRQKRNFRRLWITRINAVIREKGVSY 351
>gb|AFV61836.1| ribosomal protein L20 (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 128
Score = 107 bits (268), Expect = 5e-21
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRG+HSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRE+GVS+
Sbjct: 19 LFASSFRGSHSRLTRTITQQKIRALVSAHRDRDKQKRNFRRLWITRINAVIREKGVSY 76
>ref|YP_007353938.1| ribosomal protein L20 (chloroplast) [Tectona grandis]
gi|438687627|emb|CCP47153.1| ribosomal protein L20
(chloroplast) [Tectona grandis]
gi|438688311|emb|CCP47242.1| ribosomal protein L20
(chloroplast) [Tectona grandis]
gi|438688435|emb|CCP47331.1| ribosomal protein L20
(chloroplast) [Tectona grandis]
Length = 128
Score = 107 bits (268), Expect = 5e-21
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRG+HSRLTRTI+QQKIRALVSAHRDR QKRNFRRLWITRINAVIRERGVS+
Sbjct: 19 LFASSFRGSHSRLTRTISQQKIRALVSAHRDRAKQKRNFRRLWITRINAVIRERGVSY 76
>ref|YP_008815960.1| ribosomal protein L20 (chloroplast) [Lindenbergia philippensis]
gi|557136886|emb|CDI43941.1| ribosomal protein L20
(chloroplast) [Lindenbergia philippensis]
Length = 128
Score = 107 bits (267), Expect = 7e-21
Identities = 54/58 (93%), Positives = 55/58 (94%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR QKRNFRRLWITRINAVIRE GVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDKQKRNFRRLWITRINAVIREGGVSY 76
>ref|YP_009002278.1| ribosomal protein L20 (chloroplast) [Pinguicula ehlersiae]
gi|575882160|emb|CDL78834.1| ribosomal protein L20
(chloroplast) [Pinguicula ehlersiae]
Length = 126
Score = 106 bits (265), Expect = 1e-20
Identities = 53/56 (94%), Positives = 54/56 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGV 9
LFASSFRGAHSRLTRTITQQKIRALVS+HRDR QKRNFRRLWITRINAVIRERGV
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSSHRDRDKQKRNFRRLWITRINAVIRERGV 74
>ref|NP_054524.1| ribosomal protein L20 [Nicotiana tabacum]
gi|28261740|ref|NP_783255.1| ribosomal protein L20
[Atropa belladonna] gi|78102561|ref|YP_358702.1|
ribosomal protein L20 [Nicotiana sylvestris]
gi|81301591|ref|YP_398888.1| ribosomal protein L20
[Nicotiana tomentosiformis] gi|91209011|ref|YP_538871.1|
ribosomal protein L20 [Solanum bulbocastanum]
gi|108773153|ref|YP_635662.1| ribosomal protein L20
[Solanum tuberosum] gi|351653905|ref|YP_004891630.1|
rpl20 gene product (chloroplast) [Nicotiana undulata]
gi|544163636|ref|YP_008563111.1| ribosomal protein L20
(chloroplast) [Solanum lycopersicum]
gi|544170694|ref|AP_004951.1| ribosomal protein L20
(chloroplast) [Solanum lycopersicum]
gi|132770|sp|P06386.3|RK20_TOBAC RecName: Full=50S
ribosomal protein L20, chloroplastic
gi|68053183|sp|Q7FNS5.1|RK20_ATRBE RecName: Full=50S
ribosomal protein L20, chloroplastic
gi|122201772|sp|Q2MI77.1|RK20_SOLLC RecName: Full=50S
ribosomal protein L20, chloroplastic
gi|122201814|sp|Q2MIG4.1|RK20_SOLBU RecName: Full=50S
ribosomal protein L20, chloroplastic
gi|122209881|sp|Q2VEF5.1|RK20_SOLTU RecName: Full=50S
ribosomal protein L20, chloroplastic
gi|122212890|sp|Q33C09.1|RK20_NICTO RecName: Full=50S
ribosomal protein L20, chloroplastic
gi|122213565|sp|Q3C1K6.1|RK20_NICSY RecName: Full=50S
ribosomal protein L20, chloroplastic
gi|11852|emb|CAA77372.1| ribosomal protein L20
[Nicotiana tabacum] gi|20068354|emb|CAC88067.1|
ribosomal protein L20 [Atropa belladonna]
gi|77799588|dbj|BAE46677.1| ribosomal protein L20
[Nicotiana sylvestris] gi|80750950|dbj|BAE48026.1|
ribosomal protein L20 [Nicotiana tomentosiformis]
gi|82754649|gb|ABB90063.1| ribosomal protein L20
[Solanum tuberosum] gi|84371918|gb|ABC56236.1| ribosomal
protein L20 [Solanum bulbocastanum]
gi|84372006|gb|ABC56323.1| ribosomal protein L20
(chloroplast) [Solanum lycopersicum]
gi|88656827|gb|ABD47080.1| ribosomal protein L20
[Solanum tuberosum] gi|89241694|emb|CAJ32416.1|
ribosomal protein L20 [Solanum lycopersicum]
gi|329124605|gb|AEB72162.1| ribosomal protein L20
(chloroplast) [Solanum tuberosum]
gi|329124692|gb|AEB72248.1| ribosomal protein L20
(chloroplast) [Solanum tuberosum]
gi|347453931|gb|AEO95589.1| ribosomal protein L20
(chloroplast) [Nicotiana undulata]
gi|347454042|gb|AEO95699.1| ribosomal protein L20
[synthetic construct] gi|225221|prf||1211235BC ribosomal
protein L20
Length = 128
Score = 106 bits (264), Expect = 1e-20
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR +KR+FRRLWITRINAVIRERGVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRKKRDFRRLWITRINAVIRERGVSY 76
>gb|AGJ51276.1| ribosomal protein L20 (chloroplast) [Solanum carolinense]
Length = 128
Score = 106 bits (264), Expect = 1e-20
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -3
Query: 176 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRGSQKRNFRRLWITRINAVIRERGVSH 3
LFASSFRGAHSRLTRTITQQKIRALVSAHRDR +KR+FRRLWITRINAVIRERGVS+
Sbjct: 19 LFASSFRGAHSRLTRTITQQKIRALVSAHRDRDRKKRDFRRLWITRINAVIRERGVSY 76