BLASTX nr result
ID: Rauwolfia21_contig00028707
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00028707
(224 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349786.1| PREDICTED: mitochondrial ribosome-associated... 84 2e-14
ref|XP_004253144.1| PREDICTED: ribosome biogenesis GTPase A-like... 84 3e-14
gb|EPS71049.1| hypothetical protein M569_03714, partial [Genlise... 79 6e-13
gb|EXB70678.1| Ribosome biogenesis GTPase A [Morus notabilis] 65 1e-08
ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like... 65 1e-08
ref|XP_004307310.1| PREDICTED: mitochondrial GTPase 1-like [Frag... 64 2e-08
gb|EMJ20636.1| hypothetical protein PRUPE_ppa020684mg [Prunus pe... 64 3e-08
ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit... 61 1e-07
gb|ESW21096.1| hypothetical protein PHAVU_005G041400g [Phaseolus... 60 4e-07
gb|EOY18898.1| P-loop containing nucleoside triphosphate hydrola... 59 7e-07
gb|EOY18897.1| P-loop containing nucleoside triphosphate hydrola... 59 7e-07
ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp.... 58 2e-06
gb|EOY18915.1| P-loop containing nucleoside triphosphate hydrola... 57 2e-06
ref|NP_192803.4| P-loop containing nucleoside triphosphate hydro... 57 2e-06
emb|CAB40031.1| putative protein [Arabidopsis thaliana] gi|72677... 57 2e-06
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu... 57 3e-06
ref|XP_004983582.1| PREDICTED: mitochondrial GTPase 1-like isofo... 56 4e-06
ref|XP_004983581.1| PREDICTED: mitochondrial GTPase 1-like isofo... 56 4e-06
ref|XP_006492711.1| PREDICTED: mitochondrial ribosome-associated... 55 8e-06
ref|XP_006492710.1| PREDICTED: mitochondrial ribosome-associated... 55 8e-06
>ref|XP_006349786.1| PREDICTED: mitochondrial ribosome-associated GTPase 1-like [Solanum
tuberosum]
Length = 362
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = -3
Query: 153 SIVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
S+VQK+G A+ EVA+NK S+WWYTPHMAAAS AI ERIPLVD+++EVRDAR
Sbjct: 6 SLVQKIGNAIMEVARNKGSTWWYTPHMAAASRAITERIPLVDILLEVRDAR 56
>ref|XP_004253144.1| PREDICTED: ribosome biogenesis GTPase A-like [Solanum lycopersicum]
Length = 448
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/51 (72%), Positives = 46/51 (90%)
Frame = -3
Query: 153 SIVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
S+VQK+G A+ EVA+NK S+WWYTPHMAAAS AI ER+PLVD+++EVRDAR
Sbjct: 92 SLVQKIGNAIMEVARNKGSTWWYTPHMAAASRAITERVPLVDILLEVRDAR 142
>gb|EPS71049.1| hypothetical protein M569_03714, partial [Genlisea aurea]
Length = 250
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = -3
Query: 150 IVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
+VQK+G AVK+VAK + S WWYTP MAAAS A+AERIPLVD+V+EVRDAR
Sbjct: 4 LVQKIGKAVKDVAKARGSEWWYTPRMAAASRALAERIPLVDVVLEVRDAR 53
>gb|EXB70678.1| Ribosome biogenesis GTPase A [Morus notabilis]
Length = 370
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/56 (55%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = -3
Query: 165 MVARSIVQKLGIAVKEVAKNKSSSW-WYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
M ++ +++G + A+ K+S WY+PHMAAAS AIAERIPLVDLV+E+RDAR
Sbjct: 1 MATATLARQIGRVISNAARKKTSGGGWYSPHMAAASRAIAERIPLVDLVLEIRDAR 56
>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
biogenesis GTPase A-like [Cucumis sativus]
Length = 366
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/56 (57%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = -3
Query: 165 MVARSIVQKLGIAVKEVAK-NKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
M A ++++K+G A+ ++A N+ SS WY HM AAS A+AERIPLVD V+EVRDAR
Sbjct: 1 MAAATLMRKIGTAINQLAAGNRISSGWYDAHMEAASRAVAERIPLVDFVLEVRDAR 56
>ref|XP_004307310.1| PREDICTED: mitochondrial GTPase 1-like [Fragaria vesca subsp.
vesca]
Length = 369
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = -3
Query: 165 MVARSIVQKLGIAVKEVAKNKS-SSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
M S+ +++G+A+ + N S W++PHMAAAS AIAERIPLVDLV+EVRDAR
Sbjct: 1 MATASLAREIGMAIIKATNNSSFGRGWFSPHMAAASRAIAERIPLVDLVLEVRDAR 56
>gb|EMJ20636.1| hypothetical protein PRUPE_ppa020684mg [Prunus persica]
Length = 370
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/56 (55%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Frame = -3
Query: 165 MVARSIVQKLGIAV-KEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
M ++ +++G A+ K + S + WY+PHMAAAS AIAERIPLVDL++EVRDAR
Sbjct: 1 MATATLARQIGGAITKATSSTSSGNGWYSPHMAAASRAIAERIPLVDLILEVRDAR 56
>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
gi|297744953|emb|CBI38545.3| unnamed protein product
[Vitis vinifera]
Length = 369
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = -3
Query: 165 MVARSIVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
M ++ ++LG VK AK W++PHMAAAS A++ERIPLVDLV+EVRDAR
Sbjct: 1 MTIANLEKRLGSGVKRAAKT-----WFSPHMAAASRAVSERIPLVDLVLEVRDAR 50
>gb|ESW21096.1| hypothetical protein PHAVU_005G041400g [Phaseolus vulgaris]
Length = 371
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = -3
Query: 165 MVARSIVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
MVA + ++G AVKEV ++K + W MAAAS AIAERIPLV+LVVEVRDAR
Sbjct: 1 MVATRLGTRIGTAVKEVLRSKGA--WRDSFMAAASRAIAERIPLVNLVVEVRDAR 53
>gb|EOY18898.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 2 [Theobroma cacao]
Length = 382
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = -3
Query: 165 MVARSIVQKLGIAVKEVAKNKSSS--WWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
M + SI KL + + K SS WY PHMAAAS AIA+R+PLVD +VE+RDAR
Sbjct: 1 MASGSIASKLAREIGSIVKKAVSSNRGWYGPHMAAASCAIAQRLPLVDHIVEIRDAR 57
>gb|EOY18897.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
Length = 479
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = -3
Query: 165 MVARSIVQKLGIAVKEVAKNKSSS--WWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
M + SI KL + + K SS WY PHMAAAS AIA+R+PLVD +VE+RDAR
Sbjct: 1 MASGSIASKLAREIGSIVKKAVSSNRGWYGPHMAAASCAIAQRLPLVDHIVEIRDAR 57
>ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320477|gb|EFH50899.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 57.8 bits (138), Expect = 2e-06
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = -3
Query: 174 MASMVARSIVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
MA+ + I +++G AV + ++N + W Y PHMAAA AI+ERIPLVD V+E+RDAR
Sbjct: 1 MATAKSWKIAREIGDAVIKASRNPNRRW-YGPHMAAAVRAISERIPLVDFVLEIRDAR 57
>gb|EOY18915.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein [Theobroma cacao]
Length = 382
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = -3
Query: 165 MVARSIVQKLGIAVKEVAKNKSSS--WWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
M + SI KL + V K +SS WY PHMA A+ AIA+R+ LVDL+VE+RDAR
Sbjct: 1 MASGSIASKLAREIGSVVKKAASSNRGWYGPHMAVATCAIAQRLSLVDLIVEIRDAR 57
>ref|NP_192803.4| P-loop containing nucleoside triphosphate hydrolases superfamily
protein [Arabidopsis thaliana] gi|3600035|gb|AAC35523.1|
contains similarity to GTP-binding proteins [Arabidopsis
thaliana] gi|332657513|gb|AEE82913.1| P-loop containing
nucleoside triphosphate hydrolases superfamily protein
[Arabidopsis thaliana]
Length = 377
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -3
Query: 174 MASMVARSIVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
MA+ I +++G AV + ++N + W Y PHMAAA AI+ERIPLVD V+E+RDAR
Sbjct: 1 MATAKTWKIAREIGDAVIKASRNPNRRW-YGPHMAAAVRAISERIPLVDFVLEIRDAR 57
>emb|CAB40031.1| putative protein [Arabidopsis thaliana] gi|7267763|emb|CAB81166.1|
putative protein [Arabidopsis thaliana]
Length = 332
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = -3
Query: 174 MASMVARSIVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
MA+ I +++G AV + ++N + W Y PHMAAA AI+ERIPLVD V+E+RDAR
Sbjct: 1 MATAKTWKIAREIGDAVIKASRNPNRRW-YGPHMAAAVRAISERIPLVDFVLEIRDAR 57
>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
gi|223534309|gb|EEF36021.1| GTP binding protein,
putative [Ricinus communis]
Length = 373
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -3
Query: 150 IVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
+ ++G V + ++N+ W Y PHMAAAS AIAERI LVD V+EVRDAR
Sbjct: 2 LASEIGKRVMKASRNREQRW-YNPHMAAASSAIAERISLVDFVIEVRDAR 50
>ref|XP_004983582.1| PREDICTED: mitochondrial GTPase 1-like isoform X2 [Setaria italica]
Length = 370
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -3
Query: 174 MASMVARSIVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
MA+ A ++ ++LG AV+++ S WY HMAAA AI R+PLVDLV+EVRDAR
Sbjct: 1 MAAAAAEAVSRRLGAAVRDL-----SGAWYGRHMAAAERAIRTRLPLVDLVLEVRDAR 53
>ref|XP_004983581.1| PREDICTED: mitochondrial GTPase 1-like isoform X1 [Setaria italica]
Length = 396
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = -3
Query: 174 MASMVARSIVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
MA+ A ++ ++LG AV+++ S WY HMAAA AI R+PLVDLV+EVRDAR
Sbjct: 1 MAAAAAEAVSRRLGAAVRDL-----SGAWYGRHMAAAERAIRTRLPLVDLVLEVRDAR 53
>ref|XP_006492711.1| PREDICTED: mitochondrial ribosome-associated GTPase 1-like isoform
X3 [Citrus sinensis]
Length = 300
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = -3
Query: 150 IVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
+ +++G AV + K WY PHMAAA+ AIA+R+PLVD+++EVRDAR
Sbjct: 11 LAREIGTAVSQ----KKGGGWYGPHMAAATRAIADRMPLVDIILEVRDAR 56
>ref|XP_006492710.1| PREDICTED: mitochondrial ribosome-associated GTPase 1-like isoform
X2 [Citrus sinensis]
Length = 327
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = -3
Query: 150 IVQKLGIAVKEVAKNKSSSWWYTPHMAAASLAIAERIPLVDLVVEVRDAR 1
+ +++G AV + K WY PHMAAA+ AIA+R+PLVD+++EVRDAR
Sbjct: 11 LAREIGTAVSQ----KKGGGWYGPHMAAATRAIADRMPLVDIILEVRDAR 56